RNA–Protein interactions for RNA: YJR132W

NMD5, Transcript of Karyopherin, yeastyeast

Gene NMD5, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD5YJR132W HOL1P53389 586 aa7.55□□□□□ -1.2
NMD5YJR132W DBP9Q06218 594 aaKnown RBP7.55□□□□□ -1.2
NMD5YJR132W RRP36Q12481 300 aaPredicted RBP7.55□□□□□ -1.2
NMD5YJR132W ELM1P32801 640 aa7.54□□□□□ -1.2
NMD5YJR132W CIC1P38779 376 aaKnown RBP7.54□□□□□ -1.2
NMD5YJR132W DOT6P40059 670 aaKnown RBP7.54□□□□□ -1.2
NMD5YJR132W CWH41P53008 833 aa7.54□□□□□ -1.2
NMD5YJR132W RPN4Q03465 531 aa7.54□□□□□ -1.2
NMD5YJR132W ZUO1P32527 433 aaKnown RBP7.54□□□□□ -1.2
NMD5YJR132W DAS1P47005 663 aa7.54□□□□□ -1.2
NMD5YJR132W CFT1Q06632 1357 aaKnown RBP7.54□□□□□ -1.2
NMD5YJR132W RME1P32338 300 aaKnown RBP7.54□□□□□ -1.2
NMD5YJR132W RSM28Q03430 361 aa7.54□□□□□ -1.2
NMD5YJR132W YIL002W-AQ3E7Z5 69 aa7.54□□□□□ -1.2
NMD5YJR132W SKI3P17883 1432 aaKnown RBP7.53□□□□□ -1.2
NMD5YJR132W ECM32P32644 1121 aaKnown RBP7.53□□□□□ -1.2
NMD5YJR132W ECM1P39715 212 aa7.53□□□□□ -1.2
NMD5YJR132W UTP18P40362 594 aaPredicted RBP7.53□□□□□ -1.2
NMD5YJR132W KAR5Q04746 504 aa7.53□□□□□ -1.2
NMD5YJR132W SLP1Q12232 587 aa7.53□□□□□ -1.2
NMD5YJR132W MPH2P0CD99 609 aa7.53□□□□□ -1.2
NMD5YJR132W PKC1P24583 1151 aa7.53□□□□□ -1.2
NMD5YJR132W SWC3P31376 625 aa7.53□□□□□ -1.2
NMD5YJR132W EXO84P38261 753 aa7.53□□□□□ -1.2
NMD5YJR132W YPL191CQ08930 360 aa7.53□□□□□ -1.2
NMD5YJR132W YAH1Q12184 172 aaKnown RBP7.53□□□□□ -1.2
NMD5YJR132W STO1P34160 861 aaKnown RBP7.52□□□□□ -1.21
NMD5YJR132W STN1P38960 494 aa7.52□□□□□ -1.21
NMD5YJR132W PXR1P53335 271 aaPredicted RBP7.52□□□□□ -1.21
NMD5YJR132W VPS30Q02948 557 aa7.52□□□□□ -1.21
NMD5YJR132W RAD33Q04231 177 aa7.52□□□□□ -1.21
NMD5YJR132W HIR2P32480 875 aa7.52□□□□□ -1.21
NMD5YJR132W HPC2Q01448 625 aa7.52□□□□□ -1.21
NMD5YJR132W SSQ1Q05931 657 aaPredicted RBP7.52□□□□□ -1.21
NMD5YJR132W SSK22P25390 1331 aaPredicted RBP7.52□□□□□ -1.21
NMD5YJR132W SPA2P23201 1466 aaKnown RBP7.52□□□□□ -1.21
NMD5YJR132W FMP10P40098 244 aa7.52□□□□□ -1.21
NMD5YJR132W SWA2Q06677 668 aa7.52□□□□□ -1.21
NMD5YJR132W YDL073WQ07454 984 aa7.52□□□□□ -1.21
NMD5YJR132W REB1P21538 810 aa7.51□□□□□ -1.21
NMD5YJR132W TBS1P38114 1094 aa7.51□□□□□ -1.21
NMD5YJR132W HSE1P38753 452 aa7.51□□□□□ -1.21
NMD5YJR132W MDM38Q08179 573 aa7.51□□□□□ -1.21
NMD5YJR132W UBP14P38237 781 aaKnown RBP7.51□□□□□ -1.21
NMD5YJR132W BFR1P38934 470 aaKnown RBP RIP-Chip data7.51□□□□□ -1.21not detected
NMD5YJR132W ILV3P39522 585 aaKnown RBP7.51□□□□□ -1.21
NMD5YJR132W VIP1Q06685 1146 aaKnown RBP7.51□□□□□ -1.21
NMD5YJR132W YPR097WQ06839 1073 aa7.51□□□□□ -1.21
NMD5YJR132W YRM1Q12340 786 aa7.51□□□□□ -1.21
NMD5YJR132W KIP2P28743 706 aa7.5□□□□□ -1.21
NMD5YJR132W VPH1P32563 840 aaKnown RBP7.5□□□□□ -1.21
NMD5YJR132W TAF5P38129 798 aa7.5□□□□□ -1.21
NMD5YJR132W YAP1801P38856 637 aa7.5□□□□□ -1.21
NMD5YJR132W VID27P40157 782 aa7.5□□□□□ -1.21
NMD5YJR132W SLX4Q12098 748 aa7.5□□□□□ -1.21
NMD5YJR132W URA1P28272 314 aaPredicted RBP7.5□□□□□ -1.21
NMD5YJR132W IAH1P41734 238 aa7.5□□□□□ -1.21
NMD5YJR132W SEC26P41810 973 aaKnown RBP7.5□□□□□ -1.21
NMD5YJR132W UBP10P53874 792 aaPredicted RBP7.5□□□□□ -1.21
NMD5YJR132W EAF7P53911 425 aaKnown RBP7.5□□□□□ -1.21
NMD5YJR132W YLH47Q06493 454 aa7.5□□□□□ -1.21
NMD5YJR132W YBL111CQ3E7Y5 667 aa7.5□□□□□ -1.21
NMD5YJR132W DPS1P04802 557 aaKnown RBP7.49□□□□□ -1.21
NMD5YJR132W LEU1P07264 779 aaKnown RBP7.49□□□□□ -1.21
NMD5YJR132W RPG1P38249 964 aaKnown RBP7.49□□□□□ -1.21
NMD5YJR132W TIF3P34167 436 aaKnown RBP7.49□□□□□ -1.21
NMD5YJR132W CAJ1P39101 391 aa7.49□□□□□ -1.21
NMD5YJR132W LAM5P43560 674 aa7.49□□□□□ -1.21
NMD5YJR132W RTF1P53064 558 aa7.49□□□□□ -1.21
NMD5YJR132W ZDS2P54786 942 aa7.49□□□□□ -1.21
NMD5YJR132W POB3Q04636 552 aaKnown RBP7.49□□□□□ -1.21
NMD5YJR132W ACE2P21192 770 aa7.49□□□□□ -1.21
NMD5YJR132W DPH5P32469 300 aaPredicted RBP7.49□□□□□ -1.21
NMD5YJR132W PXA1P41909 870 aa7.49□□□□□ -1.21
NMD5YJR132W SVF1Q05515 481 aa7.49□□□□□ -1.21
NMD5YJR132W ATG38Q05789 226 aaKnown RBP7.49□□□□□ -1.21
NMD5YJR132W PMS1P14242 873 aa7.48□□□□□ -1.21
NMD5YJR132W CDC3P32457 520 aaKnown RBP7.48□□□□□ -1.21
NMD5YJR132W ATG32P40458 529 aa7.48□□□□□ -1.21
NMD5YJR132W ENP2P48234 707 aaKnown RBP7.48□□□□□ -1.21
NMD5YJR132W FAP1P53971 965 aa7.48□□□□□ -1.21
NMD5YJR132W SPO19Q03029 223 aa7.48□□□□□ -1.21
NMD5YJR132W BUD2P33314 1104 aa7.48□□□□□ -1.21
NMD5YJR132W RIM101P33400 625 aa7.48□□□□□ -1.21
NMD5YJR132W NUF2P33895 451 aa7.48□□□□□ -1.21
NMD5YJR132W YNR021WP53723 404 aaKnown RBP7.48□□□□□ -1.21
NMD5YJR132W SEC15P22224 910 aa7.47□□□□□ -1.21
NMD5YJR132W DPB3P27344 201 aa7.47□□□□□ -1.21
NMD5YJR132W RAD16P31244 790 aa7.47□□□□□ -1.21
NMD5YJR132W RTG3P38165 486 aa7.47□□□□□ -1.21
NMD5YJR132W RRF1P38771 230 aa7.47□□□□□ -1.21
NMD5YJR132W YIR042CP40586 236 aa7.47□□□□□ -1.21
NMD5YJR132W IOC3P43596 787 aa7.47□□□□□ -1.21
NMD5YJR132W VTC4P47075 721 aa7.47□□□□□ -1.21
NMD5YJR132W ATG1P53104 897 aa7.47□□□□□ -1.21
NMD5YJR132W YOR352WQ08816 343 aa7.47□□□□□ -1.21
NMD5YJR132W RRI2Q12348 645 aa7.47□□□□□ -1.21
NMD5YJR132W TOM70P07213 617 aaKnown RBP7.47□□□□□ -1.21
NMD5YJR132W PET494P07390 489 aaPredicted RBP7.47□□□□□ -1.21
NMD5YJR132W YDJ1P25491 409 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms