RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W RPN1P38764 993 aaKnown RBP5.85□□□□□ -1.47
PEP8YJL053W CUS1Q02554 436 aaPredicted RBP5.85□□□□□ -1.47
PEP8YJL053W TRP3P00937 484 aa5.84□□□□□ -1.47
PEP8YJL053W RDS2P19541 446 aaKnown RBP5.84□□□□□ -1.47
PEP8YJL053W SKP1P52286 194 aa5.84□□□□□ -1.47
PEP8YJL053W RSC6P25632 483 aa5.83□□□□□ -1.48
PEP8YJL053W YKR073CP36153 106 aa5.83□□□□□ -1.48
PEP8YJL053W TOS1P38288 455 aa5.83□□□□□ -1.48
PEP8YJL053W APM2P38700 605 aa5.83□□□□□ -1.48
PEP8YJL053W UTP4Q06679 776 aaKnown RBP5.82□□□□□ -1.48
PEP8YJL053W RQC2Q12532 1038 aaKnown RBP5.82□□□□□ -1.48
PEP8YJL053W KAP122P32767 1081 aa5.81□□□□□ -1.48
PEP8YJL053W YJL007CP47080 104 aa5.81□□□□□ -1.48
PEP8YJL053W YLR122CQ12312 125 aa5.81□□□□□ -1.48
PEP8YJL053W CHS2P14180 963 aa5.8□□□□□ -1.48
PEP8YJL053W AOS1Q06624 347 aa5.8□□□□□ -1.48
PEP8YJL053W SLP1Q12232 587 aa5.8□□□□□ -1.48
PEP8YJL053W SCD5P34758 872 aa5.79□□□□□ -1.48
PEP8YJL053W PUB1P32588 453 aaKnown RBP RIP-Chip data5.78□□□□□ -1.48not detected
PEP8YJL053W YGR130CP53278 816 aa5.78□□□□□ -1.48
PEP8YJL053W YNR040WP53736 256 aa5.78□□□□□ -1.48
PEP8YJL053W LEU3P08638 886 aa5.76□□□□□ -1.49
PEP8YJL053W SAF1P38352 637 aa5.76□□□□□ -1.49
PEP8YJL053W BRE4Q07660 1125 aa5.76□□□□□ -1.49
PEP8YJL053W MRP10O75012 95 aa5.73□□□□□ -1.49
PEP8YJL053W ENO1P00924 437 aaKnown RBP5.73□□□□□ -1.49
PEP8YJL053W NGR1P32831 672 aaKnown RBP5.73□□□□□ -1.49
PEP8YJL053W CTH1P47976 325 aa5.73□□□□□ -1.49
PEP8YJL053W TY4B-PA0A0B7P3V8 1104 aa5.72□□□□□ -1.49
PEP8YJL053W CYC7P00045 113 aa5.72□□□□□ -1.49
PEP8YJL053W IDI1P15496 288 aa5.72□□□□□ -1.49
PEP8YJL053W RTG2P32608 588 aaKnown RBP5.72□□□□□ -1.49
PEP8YJL053W ELM1P32801 640 aa5.72□□□□□ -1.49
PEP8YJL053W AKR1P39010 764 aa5.72□□□□□ -1.49
PEP8YJL053W TED1P40533 473 aa5.72□□□□□ -1.49
PEP8YJL053W DSE4P53753 1117 aa5.72□□□□□ -1.49
PEP8YJL053W MRX10Q05648 414 aa5.72□□□□□ -1.49
PEP8YJL053W TY4A-HQ6Q5P6 413 aa5.72□□□□□ -1.49
PEP8YJL053W RPC31P17890 251 aa5.71□□□□□ -1.5
PEP8YJL053W QDR2P40474 542 aa5.71□□□□□ -1.5
PEP8YJL053W NAM7P30771 971 aaKnown RBP5.7□□□□□ -1.5
PEP8YJL053W GIP2P40036 548 aa5.7□□□□□ -1.5
PEP8YJL053W RPL34BP40525 121 aaKnown RBP5.7□□□□□ -1.5
PEP8YJL053W ACS2P52910 683 aaKnown RBP5.7□□□□□ -1.5
PEP8YJL053W TY1A-NL1Q12391 440 aaKnown RBP5.7□□□□□ -1.5
PEP8YJL053W HAP4P14064 554 aa5.69□□□□□ -1.5
PEP8YJL053W UBP5P39944 805 aa5.69□□□□□ -1.5
PEP8YJL053W KTR7P40504 517 aa5.69□□□□□ -1.5
PEP8YJL053W SOK2P53438 785 aaPredicted RBP5.69□□□□□ -1.5
PEP8YJL053W MAG2Q06436 670 aaKnown RBP5.69□□□□□ -1.5
PEP8YJL053W PUF3Q07807 879 aaKnown RBP RIP-Chip data5.69□□□□□ -1.5not detected
PEP8YJL053W UBP1P25037 809 aa5.68□□□□□ -1.5
PEP8YJL053W PHO87P25360 923 aa5.68□□□□□ -1.5
PEP8YJL053W HXT5P38695 592 aa5.68□□□□□ -1.5
PEP8YJL053W YER156CP40093 338 aaKnown RBP5.68□□□□□ -1.5
PEP8YJL053W SPO74P45819 413 aa5.68□□□□□ -1.5
PEP8YJL053W GAS4Q08271 471 aa5.68□□□□□ -1.5
PEP8YJL053W ITC1P53125 1264 aa5.67□□□□□ -1.5
PEP8YJL053W TIF1P10081 395 aaKnown RBP5.66□□□□□ -1.5
PEP8YJL053W RSC2Q06488 889 aa5.66□□□□□ -1.5
PEP8YJL053W BIM1P40013 344 aa5.65□□□□□ -1.5
PEP8YJL053W REC8Q12188 680 aa5.65□□□□□ -1.5
PEP8YJL053W PEP12P32854 288 aa5.64□□□□□ -1.51
PEP8YJL053W YJL181WP46987 611 aa5.64□□□□□ -1.51
PEP8YJL053W CWH41P53008 833 aa5.64□□□□□ -1.51
PEP8YJL053W RNQ1P25367 405 aa5.63□□□□□ -1.51
PEP8YJL053W ATG32P40458 529 aa5.62□□□□□ -1.51
PEP8YJL053W YOR296WQ08748 1289 aa5.62□□□□□ -1.51
PEP8YJL053W VAN1P23642 535 aa5.61□□□□□ -1.51
PEP8YJL053W DYS1P38791 387 aa5.61□□□□□ -1.51
PEP8YJL053W MSB1P21339 1137 aaKnown RBP5.6□□□□□ -1.51
PEP8YJL053W GIP1P38229 639 aa5.59□□□□□ -1.51
PEP8YJL053W HGH1P48362 394 aaKnown RBP5.58□□□□□ -1.52
PEP8YJL053W PPT1P53043 513 aa5.58□□□□□ -1.52
PEP8YJL053W VMA3P25515 160 aa5.57□□□□□ -1.52
PEP8YJL053W YKL222CP35995 705 aa5.57□□□□□ -1.52
PEP8YJL053W ROM1P53046 1155 aa5.57□□□□□ -1.52
PEP8YJL053W SEG2P34250 1132 aa5.56□□□□□ -1.52
PEP8YJL053W LDH1P38139 375 aa5.56□□□□□ -1.52
PEP8YJL053W ISW1P38144 1129 aa5.56□□□□□ -1.52
PEP8YJL053W BSD2P38356 321 aa5.56□□□□□ -1.52
PEP8YJL053W PAN5P38787 379 aa5.56□□□□□ -1.52
PEP8YJL053W SDH1Q00711 640 aa5.56□□□□□ -1.52
PEP8YJL053W TRS33Q99394 268 aa5.56□□□□□ -1.52
PEP8YJL053W MRPL33P20084 86 aa5.55□□□□□ -1.52
PEP8YJL053W MAE1P36013 669 aaKnown RBP5.55□□□□□ -1.52
PEP8YJL053W LEM3P42838 414 aa5.55□□□□□ -1.52
PEP8YJL053W FOX2Q02207 900 aaKnown RBP5.55□□□□□ -1.52
PEP8YJL053W GAL2P13181 574 aa5.54□□□□□ -1.52
PEP8YJL053W POL12P38121 705 aaPredicted RBP5.54□□□□□ -1.52
PEP8YJL053W INP51P40559 946 aaKnown RBP5.54□□□□□ -1.52
PEP8YJL053W CAB1Q04430 367 aa5.54□□□□□ -1.52
PEP8YJL053W SIS2P36024 562 aa5.53□□□□□ -1.52
PEP8YJL053W ECL1P48235 211 aa5.53□□□□□ -1.52
PEP8YJL053W GUP1P53154 560 aa5.53□□□□□ -1.52
PEP8YJL053W LRG1P35688 1017 aa5.52□□□□□ -1.53
PEP8YJL053W YIL165CP40446 119 aa5.52□□□□□ -1.53
PEP8YJL053W NIT1P40447 199 aa5.52□□□□□ -1.53
PEP8YJL053W PRP43P53131 767 aaKnown RBP5.52□□□□□ -1.53
PEP8YJL053W YBR287WP38355 427 aa5.51□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 51.2 ms