RNA–Protein interactions for RNA: YJL033W

HCA4, Transcript of DEAD box RNA helicase, yeastyeast

Gene HCA4, Length 2,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HCA4YJL033W SPR3P41901 512 aa5.63□□□□□ -1.51
HCA4YJL033W YBL113CQ7M4S9 792 aa5.63□□□□□ -1.51
HCA4YJL033W QDR1P40475 563 aa5.62□□□□□ -1.51
HCA4YJL033W SKP1P52286 194 aa5.62□□□□□ -1.51
HCA4YJL033W KRE33P53914 1056 aaKnown RBP5.62□□□□□ -1.51
HCA4YJL033W TRL1P09880 827 aaKnown RBP5.62□□□□□ -1.51
HCA4YJL033W SSF1P38789 453 aaPredicted RBP5.62□□□□□ -1.51
HCA4YJL033W ERP5P38819 212 aa5.62□□□□□ -1.51
HCA4YJL033W ACF4P47129 309 aa5.62□□□□□ -1.51
HCA4YJL033W CEM1P39525 442 aa5.61□□□□□ -1.51
HCA4YJL033W HXT8P40886 569 aa5.61□□□□□ -1.51
HCA4YJL033W YDR461C-AQ2V2P7 80 aa5.61□□□□□ -1.51
HCA4YJL033W CUS1Q02554 436 aaPredicted RBP5.6□□□□□ -1.51
HCA4YJL033W FPS1P23900 669 aa5.6□□□□□ -1.51
HCA4YJL033W YBR287WP38355 427 aa5.6□□□□□ -1.51
HCA4YJL033W FIR1P40020 876 aa5.6□□□□□ -1.51
HCA4YJL033W LYS5P50113 272 aa5.6□□□□□ -1.51
HCA4YJL033W ADE12P80210 433 aaKnown RBP5.6□□□□□ -1.51
HCA4YJL033W INO80P53115 1489 aa5.6□□□□□ -1.51
HCA4YJL033W GIP1P38229 639 aa5.59□□□□□ -1.51
HCA4YJL033W APM2P38700 605 aa5.59□□□□□ -1.51
HCA4YJL033W SUT1P53032 299 aaKnown RBP5.59□□□□□ -1.51
HCA4YJL033W YOR296WQ08748 1289 aa5.59□□□□□ -1.51
HCA4YJL033W GRS1P38088 690 aaKnown RBP5.59□□□□□ -1.51
HCA4YJL033W ISW1P38144 1129 aa5.59□□□□□ -1.51
HCA4YJL033W NCL1P38205 684 aaKnown RBP5.59□□□□□ -1.51
HCA4YJL033W YPL062WQ02781 134 aa5.59□□□□□ -1.51
HCA4YJL033W SYT1Q06836 1226 aa5.59□□□□□ -1.51
HCA4YJL033W RPB10P22139 70 aa5.58□□□□□ -1.52
HCA4YJL033W MSN1P22148 382 aa5.58□□□□□ -1.52
HCA4YJL033W SMC1P32908 1225 aa5.58□□□□□ -1.52
HCA4YJL033W MDJ2P42834 146 aa5.58□□□□□ -1.52
HCA4YJL033W YGR035CP53222 116 aa5.57□□□□□ -1.52
HCA4YJL033W UFD2P54860 961 aa5.57□□□□□ -1.52
HCA4YJL033W HEH2Q03281 663 aa5.57□□□□□ -1.52
HCA4YJL033W YML020WQ03722 664 aa5.57□□□□□ -1.52
HCA4YJL033W HPF1Q05164 967 aa5.57□□□□□ -1.52
HCA4YJL033W DPH6Q12429 685 aa5.57□□□□□ -1.52
HCA4YJL033W KTR2P33550 425 aa5.57□□□□□ -1.52
HCA4YJL033W SLD2P34252 453 aa5.57□□□□□ -1.52
HCA4YJL033W STM1P39015 273 aaKnown RBP5.57□□□□□ -1.52
HCA4YJL033W BSD2P38356 321 aa5.56□□□□□ -1.52
HCA4YJL033W NAB2P32505 525 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52not detected
HCA4YJL033W NTA1P40354 457 aa5.55□□□□□ -1.52
HCA4YJL033W JJJ3P47138 172 aa5.55□□□□□ -1.52
HCA4YJL033W TRS120Q04183 1289 aa5.55□□□□□ -1.52
HCA4YJL033W RAD55P38953 406 aa5.54□□□□□ -1.52
HCA4YJL033W ITC1P53125 1264 aa5.54□□□□□ -1.52
HCA4YJL033W TCB3Q03640 1545 aaKnown RBP5.54□□□□□ -1.52
HCA4YJL033W MSC7P38694 644 aa5.54□□□□□ -1.52
HCA4YJL033W YNR040WP53736 256 aa5.54□□□□□ -1.52
HCA4YJL033W NOP8Q08287 484 aaPredicted RBP5.54□□□□□ -1.52
HCA4YJL033W YHL050CP38721 697 aa5.53□□□□□ -1.52
HCA4YJL033W YHR219WP38900 624 aa5.53□□□□□ -1.52
HCA4YJL033W RGD2P43556 714 aa5.53□□□□□ -1.52
HCA4YJL033W TY1A-DR2Q03964 440 aaKnown RBP5.53□□□□□ -1.52
HCA4YJL033W IRS4P36115 615 aaKnown RBP5.52□□□□□ -1.53
HCA4YJL033W NUT2Q06213 157 aa5.52□□□□□ -1.53
HCA4YJL033W AIM46P38885 310 aa5.52□□□□□ -1.53
HCA4YJL033W YER156CP40093 338 aaKnown RBP5.52□□□□□ -1.53
HCA4YJL033W YIL165CP40446 119 aa5.52□□□□□ -1.53
HCA4YJL033W MSC6Q08818 692 aaKnown RBP5.52□□□□□ -1.53
HCA4YJL033W SEC20P28791 383 aa5.51□□□□□ -1.53
HCA4YJL033W TIF6Q12522 245 aaKnown RBP5.51□□□□□ -1.53
HCA4YJL033W FRT1Q99332 602 aa5.51□□□□□ -1.53
HCA4YJL033W TRK2P28584 889 aa5.51□□□□□ -1.53
HCA4YJL033W PSY2P40164 858 aa5.51□□□□□ -1.53
HCA4YJL033W EMG1Q06287 252 aaKnown RBP5.51□□□□□ -1.53
HCA4YJL033W RSC2Q06488 889 aa5.51□□□□□ -1.53
HCA4YJL033W YNL011CP53980 444 aa5.5□□□□□ -1.53
HCA4YJL033W SEN54Q02825 467 aaPredicted RBP5.5□□□□□ -1.53
HCA4YJL033W SPT6P23615 1451 aaKnown RBP5.5□□□□□ -1.53
HCA4YJL033W HSL1P34244 1518 aa5.5□□□□□ -1.53
HCA4YJL033W PPX1P38698 397 aa5.49□□□□□ -1.53
HCA4YJL033W RSC4Q02206 625 aa5.49□□□□□ -1.53
HCA4YJL033W GPM1P00950 247 aaKnown RBP5.49□□□□□ -1.53
HCA4YJL033W IDI1P15496 288 aa5.49□□□□□ -1.53
HCA4YJL033W MNL2Q12205 849 aa5.49□□□□□ -1.53
HCA4YJL033W TY1B-DR4Q07793 1604 aa5.49□□□□□ -1.53
HCA4YJL033W TAF2P23255 1407 aa5.49□□□□□ -1.53
HCA4YJL033W KNS1P32350 737 aaPredicted RBP5.48□□□□□ -1.53
HCA4YJL033W PRK1P40494 810 aa5.48□□□□□ -1.53
HCA4YJL033W CDC55Q00362 526 aa5.48□□□□□ -1.53
HCA4YJL033W PDC5P16467 563 aaKnown RBP5.47□□□□□ -1.53
HCA4YJL033W IPL1P38991 367 aa5.47□□□□□ -1.53
HCA4YJL033W PPT1P53043 513 aa5.46□□□□□ -1.54
HCA4YJL033W BSC2Q05611 235 aa5.46□□□□□ -1.54
HCA4YJL033W GPI13Q07830 1017 aa5.46□□□□□ -1.54
HCA4YJL033W XRN1P22147 1528 aaKnown RBP5.46□□□□□ -1.54
HCA4YJL033W THI12P42883 340 aa5.45□□□□□ -1.54
HCA4YJL033W THI5P43534 340 aa5.45□□□□□ -1.54
HCA4YJL033W THI11P47183 340 aa5.45□□□□□ -1.54
HCA4YJL033W THI13Q07748 340 aa5.45□□□□□ -1.54
HCA4YJL033W AI1P03875 834 aa5.44□□□□□ -1.54
HCA4YJL033W HEM3P28789 327 aa5.44□□□□□ -1.54
HCA4YJL033W SAM37P50110 327 aa5.44□□□□□ -1.54
HCA4YJL033W WHI5Q12416 295 aa5.43□□□□□ -1.54
HCA4YJL033W MET1P36150 593 aa5.43□□□□□ -1.54
HCA4YJL033W ECM2P38241 364 aaKnown RBP5.43□□□□□ -1.54
HCA4YJL033W NOP2P40991 618 aaKnown RBP5.43□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 112 ms