RNA–Protein interactions for RNA: YIL137C

TMA108, Transcript of Ribosome-associated protein that is involved in ribosome biogenesis, yeast

Gene TMA108, Length 2,841 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TMA108	YIL137C	KAR5	Q04746	504 aa		4.16	□□□□□ -1.74
TMA108	YIL137C	GAL2	P13181	574 aa		4.15	□□□□□ -1.74
TMA108	YIL137C	KTR2	P33550	425 aa		4.15	□□□□□ -1.74
TMA108	YIL137C	GRS1	P38088	690 aa	Known RBP	4.15	□□□□□ -1.74
TMA108	YIL137C	SNF7	P39929	240 aa	Known RBP	4.15	□□□□□ -1.74
TMA108	YIL137C	TY3B-G	Q99315	1547 aa		4.15	□□□□□ -1.74
TMA108	YIL137C	CHC1	P22137	1653 aa	Known RBP	4.15	□□□□□ -1.75
TMA108	YIL137C	MRC1	P25588	1096 aa		4.15	□□□□□ -1.75
TMA108	YIL137C	ACF4	P47129	309 aa		4.15	□□□□□ -1.75
TMA108	YIL137C	IQG1	Q12280	1495 aa		4.15	□□□□□ -1.75
TMA108	YIL137C	PDR10	P51533	1564 aa		4.15	□□□□□ -1.75
TMA108	YIL137C	ESS1	P22696	170 aa		4.14	□□□□□ -1.75
TMA108	YIL137C	SPT5	P27692	1063 aa	Known RBP	4.14	□□□□□ -1.75
TMA108	YIL137C	BDP1	P46678	594 aa		4.14	□□□□□ -1.75
TMA108	YIL137C	MEH1	Q02205	184 aa		4.14	□□□□□ -1.75
TMA108	YIL137C	TIM23	P32897	222 aa		4.14	□□□□□ -1.75
TMA108	YIL137C	NUP82	P40368	713 aa		4.14	□□□□□ -1.75
TMA108	YIL137C	MVP1	P40959	511 aa	Known RBP	4.14	□□□□□ -1.75
TMA108	YIL137C	DAK2	P43550	591 aa		4.14	□□□□□ -1.75
TMA108	YIL137C	ROM1	P53046	1155 aa		4.14	□□□□□ -1.75
TMA108	YIL137C	HUL5	P53119	910 aa		4.14	□□□□□ -1.75
TMA108	YIL137C	MIP1	P15801	1254 aa		4.13	□□□□□ -1.75
TMA108	YIL137C	VID27	P40157	782 aa		4.13	□□□□□ -1.75
TMA108	YIL137C	HSC82	P15108	705 aa	Known RBP	4.13	□□□□□ -1.75
TMA108	YIL137C	ENT2	Q05785	613 aa		4.13	□□□□□ -1.75
TMA108	YIL137C	ARO1	P08566	1588 aa	Known RBP	4.13	□□□□□ -1.75
TMA108	YIL137C	GRX1	P25373	110 aa	Known RBP	4.13	□□□□□ -1.75
TMA108	YIL137C	APL6	P46682	809 aa		4.13	□□□□□ -1.75
TMA108	YIL137C	PKH1	Q03407	766 aa		4.13	□□□□□ -1.75
TMA108	YIL137C	YGR161W-C	Q3E744	92 aa		4.13	□□□□□ -1.75
TMA108	YIL137C	CAT8	P39113	1433 aa		4.12	□□□□□ -1.75
TMA108	YIL137C	MET6	P05694	767 aa	Known RBP	4.12	□□□□□ -1.75
TMA108	YIL137C	SRS2	P12954	1174 aa		4.12	□□□□□ -1.75
TMA108	YIL137C	RAD4	P14736	754 aa		4.12	□□□□□ -1.75
TMA108	YIL137C	DUT1	P33317	147 aa		4.12	□□□□□ -1.75
TMA108	YIL137C	QDR1	P40475	563 aa		4.12	□□□□□ -1.75
TMA108	YIL137C	GPG1	P53130	126 aa		4.12	□□□□□ -1.75
TMA108	YIL137C	PNP1	Q05788	311 aa		4.12	□□□□□ -1.75
TMA108	YIL137C	CDC53	Q12018	815 aa	Known RBP	4.12	□□□□□ -1.75
TMA108	YIL137C	MRF1	P30775	413 aa	Predicted RBP	4.12	□□□□□ -1.75
TMA108	YIL137C	RPN12	P32496	274 aa		4.12	□□□□□ -1.75
TMA108	YIL137C	SUV3	P32580	737 aa		4.12	□□□□□ -1.75
TMA108	YIL137C	UBX7	P38349	436 aa		4.12	□□□□□ -1.75
TMA108	YIL137C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
TMA108	YIL137C	YJR120W	P47157	116 aa		4.12	□□□□□ -1.75
TMA108	YIL137C	UTP14	Q04500	899 aa	Known RBP	4.12	□□□□□ -1.75
TMA108	YIL137C	PSR1	Q07800	427 aa		4.12	□□□□□ -1.75
TMA108	YIL137C	NUP157	P40064	1391 aa	Known RBP	4.11	□□□□□ -1.75
TMA108	YIL137C	RPL8A	P17076	256 aa	Known RBP	4.11	□□□□□ -1.75
TMA108	YIL137C	OPI1	P21957	404 aa		4.11	□□□□□ -1.75
TMA108	YIL137C	RRP8	P38961	392 aa	Known RBP	4.11	□□□□□ -1.75
TMA108	YIL137C	YGR053C	P53234	283 aa		4.11	□□□□□ -1.75
TMA108	YIL137C	PKH3	Q03306	898 aa	Predicted RBP	4.11	□□□□□ -1.75
TMA108	YIL137C	CIT1	P00890	479 aa		4.11	□□□□□ -1.75
TMA108	YIL137C	GRX7	P38068	203 aa		4.11	□□□□□ -1.75
TMA108	YIL137C	BNA1	P47096	177 aa		4.11	□□□□□ -1.75
TMA108	YIL137C	RMD1	Q03441	430 aa		4.11	□□□□□ -1.75
TMA108	YIL137C	MTC5	Q03897	1148 aa		4.11	□□□□□ -1.75
TMA108	YIL137C	SLX4	Q12098	748 aa		4.11	□□□□□ -1.75
TMA108	YIL137C	GEA1	P47102	1408 aa	Predicted RBP	4.11	□□□□□ -1.75
TMA108	YIL137C	ATP4	P05626	244 aa		4.1	□□□□□ -1.75
TMA108	YIL137C	MGE1	P38523	228 aa		4.1	□□□□□ -1.75
TMA108	YIL137C	MAL11	P53048	616 aa		4.1	□□□□□ -1.75
TMA108	YIL137C	YGR273C	P53329	174 aa		4.1	□□□□□ -1.75
TMA108	YIL137C	ATG16	Q03818	150 aa		4.1	□□□□□ -1.75
TMA108	YIL137C	NOP14	Q99207	810 aa	Known RBP	4.1	□□□□□ -1.75
TMA108	YIL137C	FOB1	O13329	566 aa		4.1	□□□□□ -1.75
TMA108	YIL137C	TY1B-A	O13527	1196 aa	Known RBP	4.1	□□□□□ -1.75
TMA108	YIL137C	TPM1	P17536	199 aa	Known RBP	4.1	□□□□□ -1.75
TMA108	YIL137C	IES1	P43579	692 aa		4.1	□□□□□ -1.75
TMA108	YIL137C	MMP1	Q12372	583 aa		4.1	□□□□□ -1.75
TMA108	YIL137C	RTP1	Q12751	981 aa		4.1	□□□□□ -1.75
TMA108	YIL137C	LSO1	Q3E827	93 aa		4.1	□□□□□ -1.75
TMA108	YIL137C	CYC8	P14922	966 aa		4.09	□□□□□ -1.75
TMA108	YIL137C	VMA1	P17255	1071 aa	Known RBP	4.09	□□□□□ -1.75
TMA108	YIL137C	SEC7	P11075	2009 aa	Known RBP	4.09	□□□□□ -1.75
TMA108	YIL137C	YKL069W	P36088	180 aa		4.09	□□□□□ -1.75
TMA108	YIL137C	MUM2	P38236	366 aa		4.09	□□□□□ -1.75
TMA108	YIL137C	CRP1	P38845	465 aa	Known RBP	4.09	□□□□□ -1.75
TMA108	YIL137C	TIF4632	P39936	914 aa	Known RBP	4.09	□□□□□ -1.75
TMA108	YIL137C	MSH4	P40965	878 aa	Predicted RBP	4.09	□□□□□ -1.75
TMA108	YIL137C	ACS2	P52910	683 aa	Known RBP	4.09	□□□□□ -1.75
TMA108	YIL137C	YMR196W	Q04336	1088 aa		4.09	□□□□□ -1.75
TMA108	YIL137C	SPO20	Q04359	397 aa		4.09	□□□□□ -1.75
TMA108	YIL137C	ERR1	P0CX10	437 aa		4.08	□□□□□ -1.76
TMA108	YIL137C	ERR2	P0CX11	437 aa		4.08	□□□□□ -1.76
TMA108	YIL137C	GPP1	P41277	250 aa	Known RBP	4.08	□□□□□ -1.76
TMA108	YIL137C	NAF1	P53919	492 aa	Known RBP	4.08	□□□□□ -1.76
TMA108	YIL137C	YOR093C	Q12275	1648 aa		4.08	□□□□□ -1.76
TMA108	YIL137C	DBP1	P24784	617 aa	Known RBP	4.08	□□□□□ -1.76
TMA108	YIL137C	STE5	P32917	917 aa		4.08	□□□□□ -1.76
TMA108	YIL137C	RPT1	P33299	467 aa	Known RBP	4.08	□□□□□ -1.76
TMA108	YIL137C	DEF1	P35732	738 aa	Known RBP	4.08	□□□□□ -1.76
TMA108	YIL137C	MDM1	Q01846	1127 aa		4.08	□□□□□ -1.76
TMA108	YIL137C	RRP9	Q06506	573 aa	Known RBP	4.08	□□□□□ -1.76
TMA108	YIL137C	IRC3	Q06683	689 aa		4.08	□□□□□ -1.76
TMA108	YIL137C	YOL036W	Q08206	761 aa		4.08	□□□□□ -1.76
TMA108	YIL137C	APC11	Q12157	165 aa		4.08	□□□□□ -1.76
TMA108	YIL137C	MCM16	Q12262	181 aa		4.08	□□□□□ -1.76
TMA108	YIL137C	HAP4	P14064	554 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 15 ms