RNA–Protein interactions for RNA: YIL040W

APQ12, Transcript of Protein required for nuclear envelope morphology, yeast

Gene APQ12, Length 417 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APQ12	YIL040W	SFA1	P32771	386 aa		4.32	□□□□□ -1.72
APQ12	YIL040W	TOS1	P38288	455 aa		4.32	□□□□□ -1.72
APQ12	YIL040W	RDS2	P19541	446 aa	Known RBP	4.31	□□□□□ -1.72
APQ12	YIL040W	CUS1	Q02554	436 aa	Predicted RBP	4.31	□□□□□ -1.72
APQ12	YIL040W	YLR122C	Q12312	125 aa		4.31	□□□□□ -1.72
APQ12	YIL040W	RSC6	P25632	483 aa		4.3	□□□□□ -1.72
APQ12	YIL040W	SKP1	P52286	194 aa		4.3	□□□□□ -1.72
APQ12	YIL040W	TSC13	Q99190	310 aa		4.3	□□□□□ -1.72
APQ12	YIL040W	APM2	P38700	605 aa		4.29	□□□□□ -1.72
APQ12	YIL040W	YGR130C	P53278	816 aa		4.29	□□□□□ -1.72
APQ12	YIL040W	AOS1	Q06624	347 aa		4.29	□□□□□ -1.72
APQ12	YIL040W	CHS2	P14180	963 aa		4.28	□□□□□ -1.72
APQ12	YIL040W	KAP122	P32767	1081 aa		4.28	□□□□□ -1.72
APQ12	YIL040W	YNR040W	P53736	256 aa		4.28	□□□□□ -1.72
APQ12	YIL040W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.27	□□□□□ -1.73	RIP-Chip
APQ12	YIL040W	RPN1	P38764	993 aa	Known RBP	4.27	□□□□□ -1.73
APQ12	YIL040W	UTP4	Q06679	776 aa	Known RBP	4.27	□□□□□ -1.73
APQ12	YIL040W	BRE4	Q07660	1125 aa		4.27	□□□□□ -1.73
APQ12	YIL040W	SCD5	P34758	872 aa		4.26	□□□□□ -1.73
APQ12	YIL040W	SAF1	P38352	637 aa		4.26	□□□□□ -1.73
APQ12	YIL040W	YJL007C	P47080	104 aa		4.26	□□□□□ -1.73
APQ12	YIL040W	SLP1	Q12232	587 aa		4.26	□□□□□ -1.73
APQ12	YIL040W	NGR1	P32831	672 aa	Known RBP	4.25	□□□□□ -1.73
APQ12	YIL040W	AKR1	P39010	764 aa		4.25	□□□□□ -1.73
APQ12	YIL040W	CTH1	P47976	325 aa		4.25	□□□□□ -1.73
APQ12	YIL040W	MRP10	O75012	95 aa		4.24	□□□□□ -1.73
APQ12	YIL040W	ELM1	P32801	640 aa		4.24	□□□□□ -1.73
APQ12	YIL040W	TED1	P40533	473 aa		4.24	□□□□□ -1.73
APQ12	YIL040W	ENO1	P00924	437 aa	Known RBP	4.23	□□□□□ -1.73
APQ12	YIL040W	CYC7	P00045	113 aa		4.22	□□□□□ -1.73
APQ12	YIL040W	IDI1	P15496	288 aa		4.22	□□□□□ -1.73
APQ12	YIL040W	NAM7	P30771	971 aa	Known RBP	4.22	□□□□□ -1.73
APQ12	YIL040W	TY4B-P	A0A0B7P3V8	1104 aa		4.21	□□□□□ -1.74
APQ12	YIL040W	LEU3	P08638	886 aa		4.21	□□□□□ -1.74
APQ12	YIL040W	RPC31	P17890	251 aa		4.21	□□□□□ -1.74
APQ12	YIL040W	UBP5	P39944	805 aa		4.21	□□□□□ -1.74
APQ12	YIL040W	GIP2	P40036	548 aa		4.21	□□□□□ -1.74
APQ12	YIL040W	QDR2	P40474	542 aa		4.21	□□□□□ -1.74
APQ12	YIL040W	KTR7	P40504	517 aa		4.21	□□□□□ -1.74
APQ12	YIL040W	DSE4	P53753	1117 aa		4.21	□□□□□ -1.74
APQ12	YIL040W	MRX10	Q05648	414 aa		4.21	□□□□□ -1.74
APQ12	YIL040W	MAG2	Q06436	670 aa	Known RBP	4.21	□□□□□ -1.74
APQ12	YIL040W	TY1A-NL1	Q12391	440 aa	Known RBP	4.21	□□□□□ -1.74
APQ12	YIL040W	TY4A-H	Q6Q5P6	413 aa		4.21	□□□□□ -1.74
APQ12	YIL040W	RTG2	P32608	588 aa	Known RBP	4.2	□□□□□ -1.74
APQ12	YIL040W	ACS2	P52910	683 aa	Known RBP	4.2	□□□□□ -1.74
APQ12	YIL040W	SOK2	P53438	785 aa	Predicted RBP	4.2	□□□□□ -1.74
APQ12	YIL040W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
APQ12	YIL040W	HXT5	P38695	592 aa		4.19	□□□□□ -1.74
APQ12	YIL040W	RPL34B	P40525	121 aa	Known RBP	4.19	□□□□□ -1.74
APQ12	YIL040W	SPO74	P45819	413 aa		4.19	□□□□□ -1.74
APQ12	YIL040W	HAP4	P14064	554 aa		4.18	□□□□□ -1.74
APQ12	YIL040W	UBP1	P25037	809 aa		4.18	□□□□□ -1.74
APQ12	YIL040W	PHO87	P25360	923 aa		4.18	□□□□□ -1.74
APQ12	YIL040W	RNQ1	P25367	405 aa		4.18	□□□□□ -1.74
APQ12	YIL040W	YER156C	P40093	338 aa	Known RBP	4.18	□□□□□ -1.74
APQ12	YIL040W	ITC1	P53125	1264 aa		4.18	□□□□□ -1.74
APQ12	YIL040W	GAS4	Q08271	471 aa		4.17	□□□□□ -1.74
APQ12	YIL040W	REC8	Q12188	680 aa		4.17	□□□□□ -1.74
APQ12	YIL040W	TIF1	P10081	395 aa	Known RBP	4.16	□□□□□ -1.74
APQ12	YIL040W	YJL181W	P46987	611 aa		4.16	□□□□□ -1.74
APQ12	YIL040W	RSC2	Q06488	889 aa		4.16	□□□□□ -1.74
APQ12	YIL040W	MSB1	P21339	1137 aa	Known RBP	4.14	□□□□□ -1.75
APQ12	YIL040W	PEP12	P32854	288 aa		4.14	□□□□□ -1.75
APQ12	YIL040W	YKL222C	P35995	705 aa		4.14	□□□□□ -1.75
APQ12	YIL040W	BIM1	P40013	344 aa		4.14	□□□□□ -1.75
APQ12	YIL040W	ATG32	P40458	529 aa		4.14	□□□□□ -1.75
APQ12	YIL040W	CWH41	P53008	833 aa		4.14	□□□□□ -1.75
APQ12	YIL040W	YOR296W	Q08748	1289 aa		4.14	□□□□□ -1.75
APQ12	YIL040W	DYS1	P38791	387 aa		4.13	□□□□□ -1.75
APQ12	YIL040W	SDH1	Q00711	640 aa		4.13	□□□□□ -1.75
APQ12	YIL040W	VAN1	P23642	535 aa		4.12	□□□□□ -1.75
APQ12	YIL040W	SEG2	P34250	1132 aa		4.12	□□□□□ -1.75
APQ12	YIL040W	GIP1	P38229	639 aa		4.12	□□□□□ -1.75
APQ12	YIL040W	PPT1	P53043	513 aa		4.12	□□□□□ -1.75
APQ12	YIL040W	POL12	P38121	705 aa	Predicted RBP	4.11	□□□□□ -1.75
APQ12	YIL040W	BSD2	P38356	321 aa		4.11	□□□□□ -1.75
APQ12	YIL040W	PAN5	P38787	379 aa		4.11	□□□□□ -1.75
APQ12	YIL040W	FOX2	Q02207	900 aa	Known RBP	4.11	□□□□□ -1.75
APQ12	YIL040W	VMA3	P25515	160 aa		4.1	□□□□□ -1.75
APQ12	YIL040W	LRG1	P35688	1017 aa		4.1	□□□□□ -1.75
APQ12	YIL040W	ROM1	P53046	1155 aa		4.1	□□□□□ -1.75
APQ12	YIL040W	MAE1	P36013	669 aa	Known RBP	4.09	□□□□□ -1.75
APQ12	YIL040W	MRPL33	P20084	86 aa		4.08	□□□□□ -1.76
APQ12	YIL040W	LDH1	P38139	375 aa		4.08	□□□□□ -1.76
APQ12	YIL040W	ISW1	P38144	1129 aa		4.08	□□□□□ -1.76
APQ12	YIL040W	ECL1	P48235	211 aa		4.08	□□□□□ -1.76
APQ12	YIL040W	PRP43	P53131	767 aa	Known RBP	4.08	□□□□□ -1.76
APQ12	YIL040W	CAB1	Q04430	367 aa		4.08	□□□□□ -1.76
APQ12	YIL040W	TRS33	Q99394	268 aa		4.08	□□□□□ -1.76
APQ12	YIL040W	GAL2	P13181	574 aa		4.07	□□□□□ -1.76
APQ12	YIL040W	YCR015C	P25616	317 aa		4.07	□□□□□ -1.76
APQ12	YIL040W	SEA4	P38164	1038 aa		4.07	□□□□□ -1.76
APQ12	YIL040W	NIT1	P40447	199 aa		4.07	□□□□□ -1.76
APQ12	YIL040W	INP51	P40559	946 aa	Known RBP	4.07	□□□□□ -1.76
APQ12	YIL040W	LEM3	P42838	414 aa		4.07	□□□□□ -1.76
APQ12	YIL040W	GAS1	P22146	559 aa	Known RBP	4.06	□□□□□ -1.76
APQ12	YIL040W	YIL165C	P40446	119 aa		4.06	□□□□□ -1.76
APQ12	YIL040W	HGH1	P48362	394 aa	Known RBP	4.06	□□□□□ -1.76
APQ12	YIL040W	GUP1	P53154	560 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms