RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W CTF18P49956 741 aa8.72□□□□□ -1.01
PEX28YHR150W CCT5P40413 562 aaKnown RBP8.71□□□□□ -1.01
PEX28YHR150W PEX14P53112 341 aa8.71□□□□□ -1.01
PEX28YHR150W GYP5Q12344 894 aa8.71□□□□□ -1.01
PEX28YHR150W MBR1P23493 339 aa8.71□□□□□ -1.02
PEX28YHR150W PBY1P38254 753 aa8.71□□□□□ -1.02
PEX28YHR150W STM1P39015 273 aaKnown RBP8.71□□□□□ -1.02
PEX28YHR150W HAT1Q12341 374 aa8.71□□□□□ -1.02
PEX28YHR150W NOP58Q12499 511 aaKnown RBP8.71□□□□□ -1.02
PEX28YHR150W SSK22P25390 1331 aaPredicted RBP8.71□□□□□ -1.02
PEX28YHR150W FRS2P15625 503 aaKnown RBP8.7□□□□□ -1.02
PEX28YHR150W SEC18P18759 758 aaKnown RBP8.7□□□□□ -1.02
PEX28YHR150W LYS4P49367 693 aaPredicted RBP8.7□□□□□ -1.02
PEX28YHR150W SSL2Q00578 843 aa8.7□□□□□ -1.02
PEX28YHR150W RRI2Q12348 645 aa8.7□□□□□ -1.02
PEX28YHR150W AI2P03876 854 aa8.69□□□□□ -1.02
PEX28YHR150W MRPL10P36520 322 aa8.69□□□□□ -1.02
PEX28YHR150W ARP5P53946 755 aa8.69□□□□□ -1.02
PEX28YHR150W ESC2Q06340 456 aa8.69□□□□□ -1.02
PEX28YHR150W PGA3Q12746 312 aaKnown RBP8.69□□□□□ -1.02
PEX28YHR150W RIM15P43565 1770 aa8.69□□□□□ -1.02
PEX28YHR150W GLN1P32288 370 aaKnown RBP8.68□□□□□ -1.02
PEX28YHR150W SPO22P40511 975 aa8.68□□□□□ -1.02
PEX28YHR150W VID28P40547 921 aa8.68□□□□□ -1.02
PEX28YHR150W UBP16Q02863 499 aa8.68□□□□□ -1.02
PEX28YHR150W TRS33Q99394 268 aa8.68□□□□□ -1.02
PEX28YHR150W CPA2P03965 1118 aaKnown RBP8.68□□□□□ -1.02
PEX28YHR150W BUD31P25337 157 aaPredicted RBP8.68□□□□□ -1.02
PEX28YHR150W ELM1P32801 640 aa8.68□□□□□ -1.02
PEX28YHR150W TTI1P36097 1038 aa8.68□□□□□ -1.02
PEX28YHR150W YNL193WP53870 558 aa8.68□□□□□ -1.02
PEX28YHR150W RAT1Q02792 1006 aaKnown RBP8.68□□□□□ -1.02
PEX28YHR150W HPC2Q01448 625 aa8.67□□□□□ -1.02
PEX28YHR150W RPN7Q06103 429 aaKnown RBP8.67□□□□□ -1.02
PEX28YHR150W CYC8P14922 966 aa8.66□□□□□ -1.02
PEX28YHR150W TPM1P17536 199 aaKnown RBP8.66□□□□□ -1.02
PEX28YHR150W RDS1P25611 832 aa8.66□□□□□ -1.02
PEX28YHR150W NGR1P32831 672 aaKnown RBP8.66□□□□□ -1.02
PEX28YHR150W NPR3P38742 1146 aa8.66□□□□□ -1.02
PEX28YHR150W CIC1P38779 376 aaKnown RBP8.66□□□□□ -1.02
PEX28YHR150W RPL17AP05740 184 aaKnown RBP8.66□□□□□ -1.02
PEX28YHR150W SES1P07284 462 aaKnown RBP8.66□□□□□ -1.02
PEX28YHR150W EPS1P40557 701 aa8.66□□□□□ -1.02
PEX28YHR150W RPL17BP46990 184 aaKnown RBP8.66□□□□□ -1.02
PEX28YHR150W TIM50Q02776 476 aa8.66□□□□□ -1.02
PEX28YHR150W ETT1Q08421 412 aaKnown RBP8.66□□□□□ -1.02
PEX28YHR150W SAC3P46674 1301 aa8.65□□□□□ -1.02
PEX28YHR150W TAF13P11747 167 aa8.65□□□□□ -1.03
PEX28YHR150W BDF1P35817 686 aa8.65□□□□□ -1.03
PEX28YHR150W TPM2P40414 161 aa8.65□□□□□ -1.03
PEX28YHR150W UTP22P53254 1237 aaPredicted RBP8.65□□□□□ -1.03
PEX28YHR150W SRC1Q03707 834 aa8.65□□□□□ -1.03
PEX28YHR150W SGD1Q06132 899 aa8.65□□□□□ -1.03
PEX28YHR150W ELG1Q12050 791 aa8.65□□□□□ -1.03
PEX28YHR150W ATE1P16639 503 aa8.63□□□□□ -1.03
PEX28YHR150W MFT1P33441 392 aaKnown RBP8.63□□□□□ -1.03
PEX28YHR150W MPE1P35728 441 aaKnown RBP8.63□□□□□ -1.03
PEX28YHR150W PSK2Q08217 1101 aa8.63□□□□□ -1.03
PEX28YHR150W YPL150WQ12152 901 aa8.63□□□□□ -1.03
PEX28YHR150W YMR147WP40218 223 aaKnown RBP8.63□□□□□ -1.03
PEX28YHR150W ALD3P54114 506 aa8.63□□□□□ -1.03
PEX28YHR150W DIB1Q06819 143 aaPredicted RBP8.63□□□□□ -1.03
PEX28YHR150W BDF2Q07442 638 aa8.63□□□□□ -1.03
PEX28YHR150W THI3Q07471 609 aa8.63□□□□□ -1.03
PEX28YHR150W RIX7Q07844 837 aaKnown RBP8.63□□□□□ -1.03
PEX28YHR150W DDP1Q99321 188 aaKnown RBP8.63□□□□□ -1.03
PEX28YHR150W MAL33P38157 468 aa8.62□□□□□ -1.03
PEX28YHR150W OSH3P38713 996 aaKnown RBP8.62□□□□□ -1.03
PEX28YHR150W ALD2P47771 506 aa8.62□□□□□ -1.03
PEX28YHR150W ENP2P48234 707 aaKnown RBP8.62□□□□□ -1.03
PEX28YHR150W VMS1Q04311 632 aaKnown RBP8.62□□□□□ -1.03
PEX28YHR150W UTP10P42945 1769 aaKnown RBP8.62□□□□□ -1.03
PEX28YHR150W GPA1P08539 472 aa8.61□□□□□ -1.03
PEX28YHR150W IMP2'P32351 346 aa8.61□□□□□ -1.03
PEX28YHR150W MNR2P35724 969 aa8.61□□□□□ -1.03
PEX28YHR150W RFC5P38251 354 aa8.61□□□□□ -1.03
PEX28YHR150W YHL017WP38745 532 aa8.61□□□□□ -1.03
PEX28YHR150W STU2P46675 888 aa8.61□□□□□ -1.03
PEX28YHR150W YKE2P52553 114 aa8.61□□□□□ -1.03
PEX28YHR150W HOS3Q02959 697 aaKnown RBP8.61□□□□□ -1.03
PEX28YHR150W ESF1Q06344 628 aaKnown RBP8.61□□□□□ -1.03
PEX28YHR150W IRC3Q06683 689 aa8.61□□□□□ -1.03
PEX28YHR150W ADR1P07248 1323 aa8.61□□□□□ -1.03
PEX28YHR150W PIF1P07271 859 aa8.6□□□□□ -1.03
PEX28YHR150W MGM1P32266 881 aa8.6□□□□□ -1.03
PEX28YHR150W RPN1P38764 993 aaKnown RBP8.6□□□□□ -1.03
PEX28YHR150W YER130CP39959 443 aa8.6□□□□□ -1.03
PEX28YHR150W DPH6Q12429 685 aa8.6□□□□□ -1.03
PEX28YHR150W MATALPHA2P0CY08 210 aa8.6□□□□□ -1.03
PEX28YHR150W HMLALPHA2P0CY09 210 aa8.6□□□□□ -1.03
PEX28YHR150W FBP26P32604 452 aa8.6□□□□□ -1.03
PEX28YHR150W FRD1P32614 470 aaKnown RBP8.6□□□□□ -1.03
PEX28YHR150W BUD6P41697 788 aa8.6□□□□□ -1.03
PEX28YHR150W SAS4Q04003 481 aa8.6□□□□□ -1.03
PEX28YHR150W SYF1Q04048 859 aaPredicted RBP8.6□□□□□ -1.03
PEX28YHR150W POM152P39685 1337 aa8.59□□□□□ -1.03
PEX28YHR150W CAF20P12962 161 aaKnown RBP8.59□□□□□ -1.03
PEX28YHR150W OPI1P21957 404 aa8.59□□□□□ -1.03
PEX28YHR150W PEP3P27801 918 aa8.59□□□□□ -1.03
PEX28YHR150W SIS2P36024 562 aa8.59□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms