RNA–Protein interactions for RNA: YGL190C

CDC55, Transcript of Non-essential regulatory subunit B of protein phosphatase 2A (PP2A), yeast

Gene CDC55, Length 1,581 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC55	YGL190C	NSG2	P53898	299 aa		5.04	□□□□□ -1.6
CDC55	YGL190C	THI72	Q08579	599 aa		5.04	□□□□□ -1.6
CDC55	YGL190C	VMA3	P25515	160 aa		5.03	□□□□□ -1.6
CDC55	YGL190C	ICP55	P40051	511 aa		5.03	□□□□□ -1.6
CDC55	YGL190C	CWH41	P53008	833 aa		5.03	□□□□□ -1.6
CDC55	YGL190C	PUF6	Q04373	656 aa	Known RBP	5.03	□□□□□ -1.6
CDC55	YGL190C	KNS1	P32350	737 aa	Predicted RBP	5.02	□□□□□ -1.61
CDC55	YGL190C	ISC10	P32645	267 aa		5.02	□□□□□ -1.61
CDC55	YGL190C	KTR2	P33550	425 aa		5.02	□□□□□ -1.61
CDC55	YGL190C	PUN1	Q06991	263 aa		5.02	□□□□□ -1.61
CDC55	YGL190C	SRS2	P12954	1174 aa		5.01	□□□□□ -1.61
CDC55	YGL190C	BOI1	P38041	980 aa	Known RBP	5.01	□□□□□ -1.61
CDC55	YGL190C	PRK1	P40494	810 aa		5.01	□□□□□ -1.61
CDC55	YGL190C	PHM7	Q12252	991 aa		5.01	□□□□□ -1.61
CDC55	YGL190C	ITC1	P53125	1264 aa		5	□□□□□ -1.61
CDC55	YGL190C	TDA6	Q06466	467 aa		5	□□□□□ -1.61
CDC55	YGL190C	BSD2	P38356	321 aa		4.99	□□□□□ -1.61
CDC55	YGL190C	MRP10	O75012	95 aa		4.99	□□□□□ -1.61
CDC55	YGL190C	RPP1A	P05318	106 aa	Predicted RBP	4.99	□□□□□ -1.61
CDC55	YGL190C	APM2	P38700	605 aa		4.99	□□□□□ -1.61
CDC55	YGL190C	HEH2	Q03281	663 aa		4.99	□□□□□ -1.61
CDC55	YGL190C	PNP1	Q05788	311 aa		4.99	□□□□□ -1.61
CDC55	YGL190C	NCL1	P38205	684 aa	Known RBP	4.98	□□□□□ -1.61
CDC55	YGL190C	MTC5	Q03897	1148 aa		4.98	□□□□□ -1.61
CDC55	YGL190C	YOR296W	Q08748	1289 aa		4.98	□□□□□ -1.61
CDC55	YGL190C	PUS1	Q12211	544 aa	Known RBP	4.98	□□□□□ -1.61
CDC55	YGL190C	IDI1	P15496	288 aa		4.97	□□□□□ -1.61
CDC55	YGL190C	DYS1	P38791	387 aa		4.97	□□□□□ -1.61
CDC55	YGL190C	BOL3	P39724	118 aa		4.97	□□□□□ -1.61
CDC55	YGL190C	RPB10	P22139	70 aa		4.95	□□□□□ -1.62
CDC55	YGL190C	MSN1	P22148	382 aa		4.95	□□□□□ -1.62
CDC55	YGL190C	YCK2	P23292	546 aa	Known RBP	4.95	□□□□□ -1.62
CDC55	YGL190C	MCX1	P38323	520 aa	Predicted RBP	4.95	□□□□□ -1.62
CDC55	YGL190C	YER156C	P40093	338 aa	Known RBP	4.95	□□□□□ -1.62
CDC55	YGL190C	YNR014W	P53719	212 aa		4.95	□□□□□ -1.62
CDC55	YGL190C	APC11	Q12157	165 aa		4.95	□□□□□ -1.62
CDC55	YGL190C	YPR053C	Q6Q5F3	151 aa		4.95	□□□□□ -1.62
CDC55	YGL190C	LDH1	P38139	375 aa		4.95	□□□□□ -1.62
CDC55	YGL190C	GIP1	P38229	639 aa		4.95	□□□□□ -1.62
CDC55	YGL190C	BOI2	P39969	1040 aa		4.95	□□□□□ -1.62
CDC55	YGL190C	NAR1	P23503	491 aa	Known RBP	4.94	□□□□□ -1.62
CDC55	YGL190C	SKN7	P38889	622 aa		4.94	□□□□□ -1.62
CDC55	YGL190C	LSB3	P43603	459 aa	Known RBP	4.94	□□□□□ -1.62
CDC55	YGL190C	GIS4	Q04233	774 aa		4.94	□□□□□ -1.62
CDC55	YGL190C	YDR215C	Q12240	137 aa		4.94	□□□□□ -1.62
CDC55	YGL190C	LSO1	Q3E827	93 aa		4.94	□□□□□ -1.62
CDC55	YGL190C	PGM2	P37012	569 aa	Known RBP	4.93	□□□□□ -1.62
CDC55	YGL190C	CCT8	P47079	568 aa	Known RBP	4.93	□□□□□ -1.62
CDC55	YGL190C	ISW1	P38144	1129 aa		4.92	□□□□□ -1.62
CDC55	YGL190C	SLN1	P39928	1220 aa	Predicted RBP	4.92	□□□□□ -1.62
CDC55	YGL190C	MET1	P36150	593 aa		4.91	□□□□□ -1.62
CDC55	YGL190C	YIL165C	P40446	119 aa		4.91	□□□□□ -1.62
CDC55	YGL190C	RGD2	P43556	714 aa		4.91	□□□□□ -1.62
CDC55	YGL190C	YMR187C	Q03236	431 aa		4.91	□□□□□ -1.62
CDC55	YGL190C	EMG1	Q06287	252 aa	Known RBP	4.91	□□□□□ -1.62
CDC55	YGL190C	ALG14	P38242	237 aa		4.91	□□□□□ -1.62
CDC55	YGL190C	HXT8	P40886	569 aa		4.91	□□□□□ -1.62
CDC55	YGL190C	SUT1	P53032	299 aa	Known RBP	4.91	□□□□□ -1.62
CDC55	YGL190C	SSA1	P10591	642 aa	Known RBP	4.89	□□□□□ -1.63
CDC55	YGL190C	RRN6	P32786	894 aa		4.89	□□□□□ -1.63
CDC55	YGL190C	PRY1	P47032	299 aa		4.89	□□□□□ -1.63
CDC55	YGL190C	PPT1	P53043	513 aa		4.89	□□□□□ -1.63
CDC55	YGL190C	NHA1	Q99271	985 aa		4.89	□□□□□ -1.63
CDC55	YGL190C	FUR4	P05316	633 aa	Known RBP	4.88	□□□□□ -1.63
CDC55	YGL190C	MCA1	Q08601	432 aa		4.88	□□□□□ -1.63
CDC55	YGL190C	NTA1	P40354	457 aa		4.87	□□□□□ -1.63
CDC55	YGL190C	TFA2	P36145	328 aa		4.87	□□□□□ -1.63
CDC55	YGL190C	BUD9	P53226	547 aa		4.87	□□□□□ -1.63
CDC55	YGL190C	RPL34A	P87262	121 aa	Predicted RBP	4.87	□□□□□ -1.63
CDC55	YGL190C	TIF6	Q12522	245 aa	Known RBP	4.87	□□□□□ -1.63
CDC55	YGL190C	YJL181W	P46987	611 aa		4.86	□□□□□ -1.63
CDC55	YGL190C	ALD3	P54114	506 aa		4.86	□□□□□ -1.63
CDC55	YGL190C	KAR5	Q04746	504 aa		4.86	□□□□□ -1.63
CDC55	YGL190C	GAS5	Q08193	484 aa		4.86	□□□□□ -1.63
CDC55	YGL190C	RAD55	P38953	406 aa		4.85	□□□□□ -1.63
CDC55	YGL190C	AMN1	P38285	549 aa	Predicted RBP	4.84	□□□□□ -1.63
CDC55	YGL190C	GLO3	P38682	493 aa	Known RBP	4.84	□□□□□ -1.63
CDC55	YGL190C	AIM46	P38885	310 aa		4.84	□□□□□ -1.63
CDC55	YGL190C	QDR1	P40475	563 aa		4.84	□□□□□ -1.63
CDC55	YGL190C	ATG1	P53104	897 aa		4.84	□□□□□ -1.63
CDC55	YGL190C	TRL1	P09880	827 aa	Known RBP	4.83	□□□□□ -1.64
CDC55	YGL190C	FIR1	P40020	876 aa		4.83	□□□□□ -1.64
CDC55	YGL190C	PSY2	P40164	858 aa		4.83	□□□□□ -1.64
CDC55	YGL190C	TED1	P40533	473 aa		4.83	□□□□□ -1.64
CDC55	YGL190C	INP51	P40559	946 aa	Known RBP	4.83	□□□□□ -1.64
CDC55	YGL190C	RSC2	Q06488	889 aa		4.83	□□□□□ -1.64
CDC55	YGL190C	IRS4	P36115	615 aa	Known RBP	4.82	□□□□□ -1.64
CDC55	YGL190C	GEF1	P37020	779 aa		4.82	□□□□□ -1.64
CDC55	YGL190C	RRM3	P38766	723 aa		4.82	□□□□□ -1.64
CDC55	YGL190C	GIP2	P40036	548 aa		4.82	□□□□□ -1.64
CDC55	YGL190C	SOK2	P53438	785 aa	Predicted RBP	4.82	□□□□□ -1.64
CDC55	YGL190C	BIO5	P53744	561 aa	Known RBP	4.82	□□□□□ -1.64
CDC55	YGL190C	SLP1	Q12232	587 aa		4.82	□□□□□ -1.64
CDC55	YGL190C	AI3	P03877	415 aa		4.82	□□□□□ -1.64
CDC55	YGL190C	FUS1	P11710	512 aa		4.82	□□□□□ -1.64
CDC55	YGL190C	SMC1	P32908	1225 aa		4.82	□□□□□ -1.64
CDC55	YGL190C	TAT1	P38085	619 aa		4.82	□□□□□ -1.64
CDC55	YGL190C	CTR9	P89105	1077 aa		4.82	□□□□□ -1.64
CDC55	YGL190C	TY4B-P	A0A0B7P3V8	1104 aa		4.81	□□□□□ -1.64
CDC55	YGL190C	COB	P00163	385 aa		4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms