RNA–Protein interactions for RNA: YFL036W

RPO41, Transcript of Mitochondrial RNA polymerase, yeast

Gene RPO41, Length 4,056 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPO41	YFL036W	LAM6	Q08001	693 aa		3.19	□□□□□ -1.9
RPO41	YFL036W	PDR18	P53756	1333 aa		3.19	□□□□□ -1.9
RPO41	YFL036W	TPM1	P17536	199 aa	Known RBP	3.19	□□□□□ -1.9
RPO41	YFL036W	NOP8	Q08287	484 aa	Predicted RBP	3.19	□□□□□ -1.9
RPO41	YFL036W	CLB5	P30283	435 aa		3.19	□□□□□ -1.9
RPO41	YFL036W	SSF1	P38789	453 aa	Predicted RBP	3.19	□□□□□ -1.9
RPO41	YFL036W	SAP155	P43612	1002 aa		3.19	□□□□□ -1.9
RPO41	YFL036W	YJR008W	P47085	338 aa		3.19	□□□□□ -1.9
RPO41	YFL036W	DNM1	P54861	757 aa		3.19	□□□□□ -1.9
RPO41	YFL036W	NCR1	Q12200	1170 aa		3.19	□□□□□ -1.9
RPO41	YFL036W	RMT2	Q03305	412 aa		3.18	□□□□□ -1.9
RPO41	YFL036W	ATG13	Q06628	738 aa		3.18	□□□□□ -1.9
RPO41	YFL036W	NOB1	Q08444	459 aa	Known RBP	3.18	□□□□□ -1.9
RPO41	YFL036W	RVB2	Q12464	471 aa	Known RBP	3.18	□□□□□ -1.9
RPO41	YFL036W	TRK1	P12685	1235 aa		3.18	□□□□□ -1.9
RPO41	YFL036W	ENT1	Q12518	454 aa		3.18	□□□□□ -1.9
RPO41	YFL036W	YJL181W	P46987	611 aa		3.17	□□□□□ -1.9
RPO41	YFL036W	APP1	P53933	587 aa		3.17	□□□□□ -1.9
RPO41	YFL036W	HEF3	P53978	1044 aa	Known RBP	3.17	□□□□□ -1.9
RPO41	YFL036W	FRK1	Q03002	865 aa	Predicted RBP	3.17	□□□□□ -1.9
RPO41	YFL036W	PUS5	Q06244	254 aa		3.17	□□□□□ -1.9
RPO41	YFL036W	HIM1	Q06674	414 aa		3.17	□□□□□ -1.9
RPO41	YFL036W	YOL057W	Q08225	711 aa		3.17	□□□□□ -1.9
RPO41	YFL036W	GAS4	Q08271	471 aa		3.17	□□□□□ -1.9
RPO41	YFL036W	PHM7	Q12252	991 aa		3.17	□□□□□ -1.9
RPO41	YFL036W	NUP145	P49687	1317 aa		3.17	□□□□□ -1.9
RPO41	YFL036W	YRF1-3	P0CX14	1859 aa		3.17	□□□□□ -1.9
RPO41	YFL036W	YRF1-7	P0CX15	1859 aa		3.17	□□□□□ -1.9
RPO41	YFL036W	YRF1-6	P53819	1859 aa		3.17	□□□□□ -1.9
RPO41	YFL036W	AI4	P03878	556 aa		3.17	□□□□□ -1.9
RPO41	YFL036W	SUI2	P20459	304 aa	Known RBP	3.17	□□□□□ -1.9
RPO41	YFL036W	EAP1	P36041	632 aa	Known RBP	3.17	□□□□□ -1.9
RPO41	YFL036W	YJL171C	P46992	396 aa		3.17	□□□□□ -1.9
RPO41	YFL036W	HST2	P53686	357 aa		3.17	□□□□□ -1.9
RPO41	YFL036W	RAD4	P14736	754 aa		3.17	□□□□□ -1.9
RPO41	YFL036W	KIP2	P28743	706 aa		3.17	□□□□□ -1.9
RPO41	YFL036W	CDC3	P32457	520 aa	Known RBP	3.17	□□□□□ -1.9
RPO41	YFL036W	MPP10	P47083	593 aa	Known RBP	3.17	□□□□□ -1.9
RPO41	YFL036W	RIM15	P43565	1770 aa		3.16	□□□□□ -1.9
RPO41	YFL036W	TPD3	P31383	635 aa		3.16	□□□□□ -1.9
RPO41	YFL036W	HSP104	P31539	908 aa	Known RBP	3.16	□□□□□ -1.9
RPO41	YFL036W	CST6	P40535	587 aa		3.16	□□□□□ -1.9
RPO41	YFL036W	ISU2	Q12056	156 aa		3.16	□□□□□ -1.9
RPO41	YFL036W	RPS19A	P07280	144 aa	Known RBP	3.16	□□□□□ -1.9
RPO41	YFL036W	RPS19B	P07281	144 aa	Predicted RBP	3.16	□□□□□ -1.9
RPO41	YFL036W	SOH1	P38633	127 aa		3.16	□□□□□ -1.9
RPO41	YFL036W	YNL115C	P53925	644 aa		3.16	□□□□□ -1.9
RPO41	YFL036W	YNL035C	P53962	389 aa	Known RBP	3.16	□□□□□ -1.9
RPO41	YFL036W	FOX2	Q02207	900 aa	Known RBP	3.16	□□□□□ -1.9
RPO41	YFL036W	THI22	Q06490	572 aa		3.16	□□□□□ -1.9
RPO41	YFL036W	TFB4	Q12004	338 aa		3.16	□□□□□ -1.9
RPO41	YFL036W	SIS1	P25294	352 aa	Known RBP	3.16	□□□□□ -1.9
RPO41	YFL036W	YKL133C	P36066	463 aa		3.16	□□□□□ -1.9
RPO41	YFL036W	TGL4	P36165	910 aa		3.16	□□□□□ -1.9
RPO41	YFL036W	YIR014W	P40570	242 aa		3.16	□□□□□ -1.9
RPO41	YFL036W	UTP22	P53254	1237 aa	Predicted RBP	3.16	□□□□□ -1.9
RPO41	YFL036W	TUB4	P53378	473 aa		3.16	□□□□□ -1.9
RPO41	YFL036W	UBX2	Q04228	584 aa		3.16	□□□□□ -1.9
RPO41	YFL036W	PSF3	Q12146	194 aa		3.16	□□□□□ -1.9
RPO41	YFL036W	MIP1	P15801	1254 aa		3.15	□□□□□ -1.9
RPO41	YFL036W	PUP1	P25043	261 aa		3.15	□□□□□ -1.9
RPO41	YFL036W	OSH3	P38713	996 aa	Known RBP	3.15	□□□□□ -1.9
RPO41	YFL036W	MTC5	Q03897	1148 aa		3.15	□□□□□ -1.9
RPO41	YFL036W	NCB2	Q92317	146 aa		3.15	□□□□□ -1.9
RPO41	YFL036W	PES4	P39684	611 aa		3.15	□□□□□ -1.91
RPO41	YFL036W	MSB3	P48566	633 aa	Predicted RBP	3.15	□□□□□ -1.91
RPO41	YFL036W	YBP2	P53169	641 aa		3.15	□□□□□ -1.91
RPO41	YFL036W	YMR074C	Q04773	145 aa		3.15	□□□□□ -1.91
RPO41	YFL036W	INP54	Q08227	384 aa	Known RBP	3.15	□□□□□ -1.91
RPO41	YFL036W	MSB4	Q12317	492 aa		3.15	□□□□□ -1.91
RPO41	YFL036W	RAD50	P12753	1312 aa		3.15	□□□□□ -1.91
RPO41	YFL036W	YIL177C	P40434	1758 aa		3.15	□□□□□ -1.91
RPO41	YFL036W	YJL225C	P40889	1758 aa		3.15	□□□□□ -1.91
RPO41	YFL036W	YIL092W	P40497	633 aa		3.15	□□□□□ -1.91
RPO41	YFL036W	RRP46	P53256	223 aa	Predicted RBP	3.15	□□□□□ -1.91
RPO41	YFL036W	KAR5	Q04746	504 aa		3.15	□□□□□ -1.91
RPO41	YFL036W	DAT1	P13483	248 aa	Known RBP	3.14	□□□□□ -1.91
RPO41	YFL036W	RAM1	P22007	431 aa		3.14	□□□□□ -1.91
RPO41	YFL036W	SLD2	P34252	453 aa		3.14	□□□□□ -1.91
RPO41	YFL036W	PUS6	P53294	404 aa		3.14	□□□□□ -1.91
RPO41	YFL036W	JIP5	Q06214	492 aa	Predicted RBP	3.14	□□□□□ -1.91
RPO41	YFL036W	YDL129W	Q07555	291 aa		3.14	□□□□□ -1.91
RPO41	YFL036W	GCD7	P32502	381 aa	Predicted RBP	3.14	□□□□□ -1.91
RPO41	YFL036W	PAC1	P39946	494 aa	Known RBP	3.14	□□□□□ -1.91
RPO41	YFL036W	SAC3	P46674	1301 aa		3.14	□□□□□ -1.91
RPO41	YFL036W	MRP7	P12687	371 aa		3.14	□□□□□ -1.91
RPO41	YFL036W	STR2	P47164	639 aa		3.14	□□□□□ -1.91
RPO41	YFL036W	PUN1	Q06991	263 aa		3.14	□□□□□ -1.91
RPO41	YFL036W	GYP1	Q08484	637 aa		3.14	□□□□□ -1.91
RPO41	YFL036W	BMS1	Q08965	1183 aa	Known RBP	3.14	□□□□□ -1.91
RPO41	YFL036W	MCM16	Q12262	181 aa		3.14	□□□□□ -1.91
RPO41	YFL036W	YBL113C	Q7M4S9	792 aa		3.14	□□□□□ -1.91
RPO41	YFL036W	UTP10	P42945	1769 aa	Known RBP	3.14	□□□□□ -1.91
RPO41	YFL036W	OSM1	P21375	501 aa	Known RBP	3.14	□□□□□ -1.91
RPO41	YFL036W	RRT14	P40470	206 aa		3.14	□□□□□ -1.91
RPO41	YFL036W	FAR11	P53917	953 aa		3.14	□□□□□ -1.91
RPO41	YFL036W	ALD3	P54114	506 aa		3.14	□□□□□ -1.91
RPO41	YFL036W	YDR306C	Q06640	478 aa		3.14	□□□□□ -1.91
RPO41	YFL036W	BUG1	Q12191	341 aa		3.14	□□□□□ -1.91
RPO41	YFL036W	PIF1	P07271	859 aa		3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms