RNA–Protein interactions for RNA: YER178W

PDA1, Transcript of E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDA1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDA1YER178W HAL5P38970 855 aaKnown RBP8.63□□□□□ -1.03
PDA1YER178W SRC1Q03707 834 aa8.63□□□□□ -1.03
PDA1YER178W SNU66Q12420 587 aaPredicted RBP8.63□□□□□ -1.03
PDA1YER178W TOM1Q03280 3268 aa8.63□□□□□ -1.03
PDA1YER178W TRM44Q02648 567 aaKnown RBP8.62□□□□□ -1.03
PDA1YER178W UTP7P40055 554 aaKnown RBP8.61□□□□□ -1.03
PDA1YER178W YIR042CP40586 236 aa8.61□□□□□ -1.03
PDA1YER178W ARG82P07250 355 aa8.6□□□□□ -1.03
PDA1YER178W RTG2P32608 588 aaKnown RBP8.6□□□□□ -1.03
PDA1YER178W BDP1P46678 594 aa8.6□□□□□ -1.03
PDA1YER178W RRG1Q12167 365 aaPredicted RBP8.6□□□□□ -1.03
PDA1YER178W RPS7AP26786 190 aaKnown RBP8.59□□□□□ -1.03
PDA1YER178W GLC3P32775 704 aa8.59□□□□□ -1.03
PDA1YER178W NSG2P53898 299 aa8.59□□□□□ -1.03
PDA1YER178W PRP42Q03776 544 aaKnown RBP8.59□□□□□ -1.03
PDA1YER178W UBX2Q04228 584 aa8.59□□□□□ -1.03
PDA1YER178W WRS1Q12109 432 aaKnown RBP8.59□□□□□ -1.03
PDA1YER178W RPS9BP05755 195 aaKnown RBP8.58□□□□□ -1.04
PDA1YER178W MSM1P22438 575 aa8.58□□□□□ -1.04
PDA1YER178W EPS1P40557 701 aa8.58□□□□□ -1.04
PDA1YER178W HGH1P48362 394 aaKnown RBP8.58□□□□□ -1.04
PDA1YER178W INM2Q05533 292 aa8.58□□□□□ -1.04
PDA1YER178W SUP35P05453 685 aaKnown RBP8.57□□□□□ -1.04
PDA1YER178W SNF3P10870 884 aa8.57□□□□□ -1.04
PDA1YER178W SSF1P38789 453 aaPredicted RBP8.57□□□□□ -1.04
PDA1YER178W MTC3P53077 123 aa8.57□□□□□ -1.04
PDA1YER178W PIB2P53191 635 aa8.57□□□□□ -1.04
PDA1YER178W YGR117CP53270 476 aa8.57□□□□□ -1.04
PDA1YER178W ALO1P54783 526 aaKnown RBP8.57□□□□□ -1.04
PDA1YER178W TIM50Q02776 476 aa8.57□□□□□ -1.04
PDA1YER178W NOT3P06102 836 aaKnown RBP8.56□□□□□ -1.04
PDA1YER178W HPR1P17629 752 aaKnown RBP8.56□□□□□ -1.04
PDA1YER178W NMD2P38798 1089 aaKnown RBP8.56□□□□□ -1.04
PDA1YER178W YFH7P43591 353 aa8.56□□□□□ -1.04
PDA1YER178W YJL171CP46992 396 aa8.56□□□□□ -1.04
PDA1YER178W PEX21P50091 288 aa8.56□□□□□ -1.04
PDA1YER178W YGL242CP53066 181 aa8.56□□□□□ -1.04
PDA1YER178W GRX7P38068 203 aa8.55□□□□□ -1.04
PDA1YER178W TIF4632P39936 914 aaKnown RBP8.55□□□□□ -1.04
PDA1YER178W NUG1P40010 520 aaKnown RBP8.55□□□□□ -1.04
PDA1YER178W EMP47P43555 445 aa8.55□□□□□ -1.04
PDA1YER178W PTK1P36002 662 aaPredicted RBP8.54□□□□□ -1.04
PDA1YER178W TFA1P36100 482 aa8.54□□□□□ -1.04
PDA1YER178W ECM21P38167 1117 aaKnown RBP8.54□□□□□ -1.04
PDA1YER178W VHR2P40041 505 aa8.54□□□□□ -1.04
PDA1YER178W AIM7Q12156 149 aa8.54□□□□□ -1.04
PDA1YER178W JJJ2P46997 583 aa8.53□□□□□ -1.04
PDA1YER178W MRPS35P53292 345 aa8.53□□□□□ -1.04
PDA1YER178W RMD1Q03441 430 aa8.53□□□□□ -1.04
PDA1YER178W CBP1P07252 654 aa8.52□□□□□ -1.05
PDA1YER178W YIL089WP40500 205 aa8.52□□□□□ -1.05
PDA1YER178W RRI2Q12348 645 aa8.52□□□□□ -1.05
PDA1YER178W PDR18P53756 1333 aa8.52□□□□□ -1.05
PDA1YER178W CDC16P09798 840 aa8.51□□□□□ -1.05
PDA1YER178W YMR147WP40218 223 aaKnown RBP8.51□□□□□ -1.05
PDA1YER178W NCB2Q92317 146 aa8.51□□□□□ -1.05
PDA1YER178W PNT1P38969 423 aa8.5□□□□□ -1.05
PDA1YER178W MLC1P53141 149 aa8.5□□□□□ -1.05
PDA1YER178W CRF1Q04930 467 aa8.5□□□□□ -1.05
PDA1YER178W NKP2Q06162 153 aa8.5□□□□□ -1.05
PDA1YER178W MRPL32P25348 183 aa8.49□□□□□ -1.05
PDA1YER178W PEA2P40091 420 aa8.49□□□□□ -1.05
PDA1YER178W PUS6P53294 404 aa8.49□□□□□ -1.05
PDA1YER178W KAR5Q04746 504 aa8.49□□□□□ -1.05
PDA1YER178W LAM4P38800 1345 aa8.49□□□□□ -1.05
PDA1YER178W RPL17AP05740 184 aaKnown RBP8.48□□□□□ -1.05
PDA1YER178W PIF1P07271 859 aa8.48□□□□□ -1.05
PDA1YER178W RFC1P38630 861 aaKnown RBP8.48□□□□□ -1.05
PDA1YER178W KEL1P38853 1164 aaKnown RBP8.48□□□□□ -1.05
PDA1YER178W RPL17BP46990 184 aaKnown RBP8.48□□□□□ -1.05
PDA1YER178W ACK1Q07622 623 aaPredicted RBP8.48□□□□□ -1.05
PDA1YER178W MDL2P33311 773 aa8.47□□□□□ -1.05
PDA1YER178W ETP1P38748 585 aaKnown RBP8.47□□□□□ -1.05
PDA1YER178W APL6P46682 809 aa8.47□□□□□ -1.05
PDA1YER178W SEN54Q02825 467 aaPredicted RBP8.47□□□□□ -1.05
PDA1YER178W PSF3Q12146 194 aa8.47□□□□□ -1.05
PDA1YER178W RRD1P40454 393 aaKnown RBP8.46□□□□□ -1.06
PDA1YER178W BBC1P47068 1157 aa8.46□□□□□ -1.06
PDA1YER178W PKH3Q03306 898 aaPredicted RBP8.46□□□□□ -1.06
PDA1YER178W CSR2Q12734 1121 aa8.46□□□□□ -1.06
PDA1YER178W BOI1P38041 980 aaKnown RBP8.45□□□□□ -1.06
PDA1YER178W YHL050CP38721 697 aa8.45□□□□□ -1.06
PDA1YER178W CWC15Q03772 175 aaKnown RBP8.44□□□□□ -1.06
PDA1YER178W CYB2P00175 591 aa8.43□□□□□ -1.06
PDA1YER178W CHO2P05374 869 aaKnown RBP8.43□□□□□ -1.06
PDA1YER178W PBY1P38254 753 aa8.43□□□□□ -1.06
PDA1YER178W PPM2Q08282 695 aa8.43□□□□□ -1.06
PDA1YER178W TUB2P02557 457 aaKnown RBP8.42□□□□□ -1.06
PDA1YER178W COQ1P18900 473 aa8.42□□□□□ -1.06
PDA1YER178W RAD53P22216 821 aa8.42□□□□□ -1.06
PDA1YER178W KTR1P27810 393 aaKnown RBP8.42□□□□□ -1.06
PDA1YER178W NIT1P40447 199 aa8.42□□□□□ -1.06
PDA1YER178W PFK2P16862 959 aaKnown RBP RIP-Chip data8.41□□□□□ -1.06not detected
PDA1YER178W ADP1P25371 1049 aa8.41□□□□□ -1.06
PDA1YER178W AAP1P37898 856 aaKnown RBP8.41□□□□□ -1.06
PDA1YER178W PEX29Q03370 554 aa8.41□□□□□ -1.06
PDA1YER178W BRE1Q07457 700 aaKnown RBP8.41□□□□□ -1.06
PDA1YER178W TYW1Q08960 810 aaKnown RBP8.41□□□□□ -1.06
PDA1YER178W RIM20Q12033 661 aa8.41□□□□□ -1.06
PDA1YER178W RAD50P12753 1312 aa8.4□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 39.8 ms