RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	RRN6	P32786	894 aa		3.48	□□□□□ -1.85
DOT6	YER088C	QDR1	P40475	563 aa		3.48	□□□□□ -1.85
DOT6	YER088C	SEN54	Q02825	467 aa	Predicted RBP	3.48	□□□□□ -1.85
DOT6	YER088C	YML020W	Q03722	664 aa		3.48	□□□□□ -1.85
DOT6	YER088C	MRPL16	P38064	232 aa		3.47	□□□□□ -1.85
DOT6	YER088C	ACF4	P47129	309 aa		3.47	□□□□□ -1.85
DOT6	YER088C	MTO1	P53070	669 aa		3.47	□□□□□ -1.85
DOT6	YER088C	CUS1	Q02554	436 aa	Predicted RBP	3.47	□□□□□ -1.85
DOT6	YER088C	MSN1	P22148	382 aa		3.46	□□□□□ -1.86
DOT6	YER088C	GLO3	P38682	493 aa	Known RBP	3.46	□□□□□ -1.86
DOT6	YER088C	MSC7	P38694	644 aa		3.46	□□□□□ -1.86
DOT6	YER088C	YTA6	P40328	754 aa		3.46	□□□□□ -1.86
DOT6	YER088C	MNL2	Q12205	849 aa		3.46	□□□□□ -1.86
DOT6	YER088C	FRT1	Q99332	602 aa		3.46	□□□□□ -1.86
DOT6	YER088C	DYS1	P38791	387 aa		3.46	□□□□□ -1.86
DOT6	YER088C	RGD2	P43556	714 aa		3.46	□□□□□ -1.86
DOT6	YER088C	YOR296W	Q08748	1289 aa		3.46	□□□□□ -1.86
DOT6	YER088C	YDR461C-A	Q2V2P7	80 aa		3.46	□□□□□ -1.86
DOT6	YER088C	LDH1	P38139	375 aa		3.45	□□□□□ -1.86
DOT6	YER088C	BSD2	P38356	321 aa		3.45	□□□□□ -1.86
DOT6	YER088C	HXT8	P40886	569 aa		3.45	□□□□□ -1.86
DOT6	YER088C	ITC1	P53125	1264 aa		3.45	□□□□□ -1.86
DOT6	YER088C	YNR040W	P53736	256 aa		3.45	□□□□□ -1.86
DOT6	YER088C	SYT1	Q06836	1226 aa		3.45	□□□□□ -1.86
DOT6	YER088C	STB3	Q12427	513 aa		3.45	□□□□□ -1.86
DOT6	YER088C	GRS1	P38088	690 aa	Known RBP	3.44	□□□□□ -1.86
DOT6	YER088C	NUT2	Q06213	157 aa		3.44	□□□□□ -1.86
DOT6	YER088C	GPI13	Q07830	1017 aa		3.44	□□□□□ -1.86
DOT6	YER088C	GIP1	P38229	639 aa		3.44	□□□□□ -1.86
DOT6	YER088C	APM2	P38700	605 aa		3.44	□□□□□ -1.86
DOT6	YER088C	LYS5	P50113	272 aa		3.44	□□□□□ -1.86
DOT6	YER088C	SUT1	P53032	299 aa	Known RBP	3.44	□□□□□ -1.86
DOT6	YER088C	KRE33	P53914	1056 aa	Known RBP	3.44	□□□□□ -1.86
DOT6	YER088C	TRS120	Q04183	1289 aa		3.44	□□□□□ -1.86
DOT6	YER088C	HPF1	Q05164	967 aa		3.44	□□□□□ -1.86
DOT6	YER088C	YHL050C	P38721	697 aa		3.43	□□□□□ -1.86
DOT6	YER088C	YHR219W	P38900	624 aa		3.43	□□□□□ -1.86
DOT6	YER088C	NTA1	P40354	457 aa		3.43	□□□□□ -1.86
DOT6	YER088C	YPL062W	Q02781	134 aa		3.43	□□□□□ -1.86
DOT6	YER088C	YMR265C	Q03508	461 aa	Known RBP	3.43	□□□□□ -1.86
DOT6	YER088C	ISW1	P38144	1129 aa		3.43	□□□□□ -1.86
DOT6	YER088C	JJJ3	P47138	172 aa		3.43	□□□□□ -1.86
DOT6	YER088C	ADE12	P80210	433 aa	Known RBP	3.43	□□□□□ -1.86
DOT6	YER088C	EMG1	Q06287	252 aa	Known RBP	3.43	□□□□□ -1.86
DOT6	YER088C	MSC6	Q08818	692 aa	Known RBP	3.43	□□□□□ -1.86
DOT6	YER088C	WHI5	Q12416	295 aa		3.43	□□□□□ -1.86
DOT6	YER088C	TIF6	Q12522	245 aa	Known RBP	3.43	□□□□□ -1.86
DOT6	YER088C	STM1	P39015	273 aa	Known RBP	3.42	□□□□□ -1.86
DOT6	YER088C	YER156C	P40093	338 aa	Known RBP	3.42	□□□□□ -1.86
DOT6	YER088C	UFD2	P54860	961 aa		3.42	□□□□□ -1.86
DOT6	YER088C	RSC4	Q02206	625 aa		3.42	□□□□□ -1.86
DOT6	YER088C	TY1A-DR2	Q03964	440 aa	Known RBP	3.42	□□□□□ -1.86
DOT6	YER088C	DNA2	P38859	1522 aa		3.42	□□□□□ -1.86
DOT6	YER088C	IDI1	P15496	288 aa		3.41	□□□□□ -1.86
DOT6	YER088C	PPX1	P38698	397 aa		3.41	□□□□□ -1.86
DOT6	YER088C	IPL1	P38991	367 aa		3.41	□□□□□ -1.86
DOT6	YER088C	CEM1	P39525	442 aa		3.41	□□□□□ -1.86
DOT6	YER088C	YIL165C	P40446	119 aa		3.41	□□□□□ -1.86
DOT6	YER088C	FPS1	P23900	669 aa		3.41	□□□□□ -1.86
DOT6	YER088C	SMC1	P32908	1225 aa		3.41	□□□□□ -1.86
DOT6	YER088C	RAD55	P38953	406 aa		3.41	□□□□□ -1.86
DOT6	YER088C	CTR9	P89105	1077 aa		3.41	□□□□□ -1.86
DOT6	YER088C	HEH2	Q03281	663 aa		3.41	□□□□□ -1.86
DOT6	YER088C	RPP1A	P05318	106 aa	Predicted RBP	3.4	□□□□□ -1.87
DOT6	YER088C	MET4	P32389	672 aa		3.4	□□□□□ -1.87
DOT6	YER088C	IRS4	P36115	615 aa	Known RBP	3.4	□□□□□ -1.87
DOT6	YER088C	NCL1	P38205	684 aa	Known RBP	3.4	□□□□□ -1.87
DOT6	YER088C	PSY2	P40164	858 aa		3.4	□□□□□ -1.87
DOT6	YER088C	PRK1	P40494	810 aa		3.4	□□□□□ -1.87
DOT6	YER088C	MRP10	O75012	95 aa		3.39	□□□□□ -1.87
DOT6	YER088C	COB	P00163	385 aa		3.39	□□□□□ -1.87
DOT6	YER088C	YNL011C	P53980	444 aa		3.39	□□□□□ -1.87
DOT6	YER088C	CDC55	Q00362	526 aa		3.39	□□□□□ -1.87
DOT6	YER088C	DPH6	Q12429	685 aa		3.39	□□□□□ -1.87
DOT6	YER088C	GPM1	P00950	247 aa	Known RBP	3.39	□□□□□ -1.87
DOT6	YER088C	FIR1	P40020	876 aa		3.39	□□□□□ -1.87
DOT6	YER088C	RRP15	Q06511	250 aa	Predicted RBP	3.39	□□□□□ -1.87
DOT6	YER088C	PHO4	P07270	312 aa	Known RBP	3.38	□□□□□ -1.87
DOT6	YER088C	AIM46	P38885	310 aa		3.38	□□□□□ -1.87
DOT6	YER088C	PDC5	P16467	563 aa	Known RBP	3.37	□□□□□ -1.87
DOT6	YER088C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	3.37	□□□□□ -1.87	not detected
DOT6	YER088C	SEC20	P28791	383 aa		3.37	□□□□□ -1.87
DOT6	YER088C	KNS1	P32350	737 aa	Predicted RBP	3.37	□□□□□ -1.87
DOT6	YER088C	DUR3	P33413	735 aa		3.37	□□□□□ -1.87
DOT6	YER088C	SLD2	P34252	453 aa		3.37	□□□□□ -1.87
DOT6	YER088C	YGR035C	P53222	116 aa		3.37	□□□□□ -1.87
DOT6	YER088C	SWR1	Q05471	1514 aa		3.37	□□□□□ -1.87
DOT6	YER088C	KOG1	P38873	1557 aa		3.37	□□□□□ -1.87
DOT6	YER088C	HVG1	P0CE11	249 aa		3.37	□□□□□ -1.87
DOT6	YER088C	ATE1	P16639	503 aa		3.36	□□□□□ -1.87
DOT6	YER088C	TRK2	P28584	889 aa		3.36	□□□□□ -1.87
DOT6	YER088C	PYC2	P32327	1180 aa	Known RBP	3.36	□□□□□ -1.87
DOT6	YER088C	AMN1	P38285	549 aa	Predicted RBP	3.36	□□□□□ -1.87
DOT6	YER088C	PPT1	P53043	513 aa		3.36	□□□□□ -1.87
DOT6	YER088C	ALD3	P54114	506 aa		3.36	□□□□□ -1.87
DOT6	YER088C	BSC2	Q05611	235 aa		3.36	□□□□□ -1.87
DOT6	YER088C	TFA2	P36145	328 aa		3.36	□□□□□ -1.87
DOT6	YER088C	INP51	P40559	946 aa	Known RBP	3.36	□□□□□ -1.87
DOT6	YER088C	YFL066C	P43538	392 aa		3.36	□□□□□ -1.87
DOT6	YER088C	TOS4	Q06266	489 aa		3.36	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms