RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C PKC1P24583 1151 aa5.26□□□□□ -1.57
SMB1YER029C TOS1P38288 455 aa5.26□□□□□ -1.57
SMB1YER029C RDS2P19541 446 aaKnown RBP5.25□□□□□ -1.57
SMB1YER029C SFA1P32771 386 aa5.25□□□□□ -1.57
SMB1YER029C KAE1P36132 386 aa5.25□□□□□ -1.57
SMB1YER029C CTH1P47976 325 aa5.25□□□□□ -1.57
SMB1YER029C SKP1P52286 194 aa5.25□□□□□ -1.57
SMB1YER029C AOS1Q06624 347 aa5.24□□□□□ -1.57
SMB1YER029C CUS1Q02554 436 aaPredicted RBP5.23□□□□□ -1.57
SMB1YER029C YLR122CQ12312 125 aa5.23□□□□□ -1.57
SMB1YER029C CYT1P07143 309 aa5.22□□□□□ -1.57
SMB1YER029C PDI1P17967 522 aaKnown RBP5.22□□□□□ -1.57
SMB1YER029C UTP4Q06679 776 aaKnown RBP5.22□□□□□ -1.57
SMB1YER029C TSC13Q99190 310 aa5.21□□□□□ -1.58
SMB1YER029C YGR130CP53278 816 aa5.2□□□□□ -1.58
SMB1YER029C APM2P38700 605 aa5.19□□□□□ -1.58
SMB1YER029C BRE4Q07660 1125 aa5.19□□□□□ -1.58
SMB1YER029C RSC6P25632 483 aa5.18□□□□□ -1.58
SMB1YER029C PUB1P32588 453 aaKnown RBP RIP-Chip data5.18□□□□□ -1.58not detected
SMB1YER029C KAP122P32767 1081 aa5.18□□□□□ -1.58
SMB1YER029C ELM1P32801 640 aa5.18□□□□□ -1.58
SMB1YER029C NGR1P32831 672 aaKnown RBP5.18□□□□□ -1.58
SMB1YER029C YNR040WP53736 256 aa5.18□□□□□ -1.58
SMB1YER029C SLP1Q12232 587 aa5.18□□□□□ -1.58
SMB1YER029C RNQ1P25367 405 aa5.17□□□□□ -1.58
SMB1YER029C SCD5P34758 872 aa5.17□□□□□ -1.58
SMB1YER029C SAF1P38352 637 aa5.16□□□□□ -1.58
SMB1YER029C UBP5P39944 805 aa5.16□□□□□ -1.58
SMB1YER029C DMA2P53924 522 aa5.16□□□□□ -1.58
SMB1YER029C MRP10O75012 95 aa5.15□□□□□ -1.59
SMB1YER029C CHS2P14180 963 aa5.15□□□□□ -1.59
SMB1YER029C RPC31P17890 251 aa5.15□□□□□ -1.59
SMB1YER029C MRX10Q05648 414 aa5.15□□□□□ -1.59
SMB1YER029C IDI1P15496 288 aa5.14□□□□□ -1.59
SMB1YER029C NAM7P30771 971 aaKnown RBP5.13□□□□□ -1.59
SMB1YER029C ENO1P00924 437 aaKnown RBP5.12□□□□□ -1.59
SMB1YER029C UBP1P25037 809 aa5.12□□□□□ -1.59
SMB1YER029C HXT5P38695 592 aa5.12□□□□□ -1.59
SMB1YER029C AKR1P39010 764 aa5.12□□□□□ -1.59
SMB1YER029C YJL007CP47080 104 aa5.12□□□□□ -1.59
SMB1YER029C TY1A-NL1Q12391 440 aaKnown RBP5.12□□□□□ -1.59
SMB1YER029C TY4B-PA0A0B7P3V8 1104 aa5.11□□□□□ -1.59
SMB1YER029C MAG2Q06436 670 aaKnown RBP5.11□□□□□ -1.59
SMB1YER029C TY4A-HQ6Q5P6 413 aa5.11□□□□□ -1.59
SMB1YER029C YER156CP40093 338 aaKnown RBP5.1□□□□□ -1.59
SMB1YER029C QDR2P40474 542 aa5.1□□□□□ -1.59
SMB1YER029C TED1P40533 473 aa5.1□□□□□ -1.59
SMB1YER029C CYC7P00045 113 aa5.09□□□□□ -1.59
SMB1YER029C BIM1P40013 344 aa5.09□□□□□ -1.59
SMB1YER029C GIP2P40036 548 aa5.09□□□□□ -1.59
SMB1YER029C ATG32P40458 529 aa5.09□□□□□ -1.59
SMB1YER029C ACS2P52910 683 aaKnown RBP5.09□□□□□ -1.59
SMB1YER029C PUF3Q07807 879 aaKnown RBP RIP-Chip data5.09□□□□□ -1.59not detected
SMB1YER029C PEP12P32854 288 aa5.08□□□□□ -1.6
SMB1YER029C SPO74P45819 413 aa5.08□□□□□ -1.6
SMB1YER029C ITC1P53125 1264 aa5.08□□□□□ -1.6
SMB1YER029C DSE4P53753 1117 aa5.08□□□□□ -1.6
SMB1YER029C GAS4Q08271 471 aa5.08□□□□□ -1.6
SMB1YER029C PHO87P25360 923 aa5.07□□□□□ -1.6
SMB1YER029C HGH1P48362 394 aaKnown RBP5.07□□□□□ -1.6
SMB1YER029C HAP4P14064 554 aa5.06□□□□□ -1.6
SMB1YER029C YKL222CP35995 705 aa5.06□□□□□ -1.6
SMB1YER029C SOK2P53438 785 aaPredicted RBP5.06□□□□□ -1.6
SMB1YER029C REC8Q12188 680 aa5.06□□□□□ -1.6
SMB1YER029C RTG2P32608 588 aaKnown RBP5.05□□□□□ -1.6
SMB1YER029C SEA4P38164 1038 aa5.05□□□□□ -1.6
SMB1YER029C TIF1P10081 395 aaKnown RBP5.04□□□□□ -1.6
SMB1YER029C SEG2P34250 1132 aa5.04□□□□□ -1.6
SMB1YER029C KTR7P40504 517 aa5.04□□□□□ -1.6
SMB1YER029C YOR296WQ08748 1289 aa5.04□□□□□ -1.6
SMB1YER029C RSC2Q06488 889 aa5.03□□□□□ -1.6
SMB1YER029C LRG1P35688 1017 aa5.02□□□□□ -1.61
SMB1YER029C RPL34BP40525 121 aaKnown RBP5.02□□□□□ -1.61
SMB1YER029C SDH1Q00711 640 aa5.01□□□□□ -1.61
SMB1YER029C MSB1P21339 1137 aaKnown RBP5□□□□□ -1.61
SMB1YER029C YCR015CP25616 317 aa5□□□□□ -1.61
SMB1YER029C GIP1P38229 639 aa4.99□□□□□ -1.61
SMB1YER029C BSD2P38356 321 aa4.99□□□□□ -1.61
SMB1YER029C DYS1P38791 387 aa4.99□□□□□ -1.61
SMB1YER029C YJL181WP46987 611 aa4.99□□□□□ -1.61
SMB1YER029C ROM1P53046 1155 aa4.99□□□□□ -1.61
SMB1YER029C VAN1P23642 535 aa4.98□□□□□ -1.61
SMB1YER029C CWH41P53008 833 aa4.98□□□□□ -1.61
SMB1YER029C PPT1P53043 513 aa4.98□□□□□ -1.61
SMB1YER029C CAB1Q04430 367 aa4.98□□□□□ -1.61
SMB1YER029C VMA3P25515 160 aa4.97□□□□□ -1.61
SMB1YER029C PAN5P38787 379 aa4.97□□□□□ -1.61
SMB1YER029C MRPL33P20084 86 aa4.96□□□□□ -1.62
SMB1YER029C NIT1P40447 199 aa4.96□□□□□ -1.62
SMB1YER029C GAL2P13181 574 aa4.95□□□□□ -1.62
SMB1YER029C POL12P38121 705 aaPredicted RBP4.95□□□□□ -1.62
SMB1YER029C ISW1P38144 1129 aa4.95□□□□□ -1.62
SMB1YER029C TRS33Q99394 268 aa4.95□□□□□ -1.62
SMB1YER029C TTI1P36097 1038 aa4.94□□□□□ -1.62
SMB1YER029C LDH1P38139 375 aa4.94□□□□□ -1.62
SMB1YER029C YIL165CP40446 119 aa4.94□□□□□ -1.62
SMB1YER029C INP51P40559 946 aaKnown RBP4.94□□□□□ -1.62
SMB1YER029C LEM3P42838 414 aa4.94□□□□□ -1.62
SMB1YER029C TAF1P46677 1066 aa4.94□□□□□ -1.62
SMB1YER029C ECL1P48235 211 aa4.94□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 54.5 ms