RNA–Protein interactions for RNA: YDR180W

SCC2, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeastyeast

Gene SCC2, Length 4,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCC2YDR180W SRP54P20424 541 aaKnown RBP1.3□□□□□ -2.2
SCC2YDR180W MID1P41821 548 aa1.3□□□□□ -2.2
SCC2YDR180W ATG36P46983 293 aa1.3□□□□□ -2.2
SCC2YDR180W ACS2P52910 683 aaKnown RBP1.3□□□□□ -2.2
SCC2YDR180W FAR11P53917 953 aa1.3□□□□□ -2.2
SCC2YDR180W CWC15Q03772 175 aaKnown RBP1.3□□□□□ -2.2
SCC2YDR180W NUT2Q06213 157 aa1.3□□□□□ -2.2
SCC2YDR180W STB3Q12427 513 aa1.3□□□□□ -2.2
SCC2YDR180W FUR4P05316 633 aaKnown RBP1.3□□□□□ -2.2
SCC2YDR180W PCT1P13259 424 aa1.3□□□□□ -2.2
SCC2YDR180W ASF1P32447 279 aa1.3□□□□□ -2.2
SCC2YDR180W MGE1P38523 228 aa1.3□□□□□ -2.2
SCC2YDR180W RSC30P38781 883 aa1.3□□□□□ -2.2
SCC2YDR180W MTO1P53070 669 aa1.3□□□□□ -2.2
SCC2YDR180W KIP3P53086 805 aaKnown RBP1.3□□□□□ -2.2
SCC2YDR180W CWC24P53769 259 aa1.3□□□□□ -2.2
SCC2YDR180W CSC1Q06538 782 aa1.3□□□□□ -2.2
SCC2YDR180W YDL206WQ12424 762 aa1.3□□□□□ -2.2
SCC2YDR180W YOL098CQ12496 1037 aa1.3□□□□□ -2.2
SCC2YDR180W SIT4P20604 311 aa1.3□□□□□ -2.2
SCC2YDR180W SOH1P38633 127 aa1.3□□□□□ -2.2
SCC2YDR180W QDR1P40475 563 aa1.3□□□□□ -2.2
SCC2YDR180W PSR1Q07800 427 aa1.3□□□□□ -2.2
SCC2YDR180W MNL2Q12205 849 aa1.3□□□□□ -2.2
SCC2YDR180W PAN1P32521 1480 aa1.3□□□□□ -2.2
SCC2YDR180W LTE1P07866 1435 aa1.3□□□□□ -2.2
SCC2YDR180W YEF3P16521 1044 aaKnown RBP1.3□□□□□ -2.2
SCC2YDR180W CCC2P38995 1004 aa1.3□□□□□ -2.2
SCC2YDR180W CIN4P39110 191 aa1.3□□□□□ -2.2
SCC2YDR180W DAN4P47179 1161 aa1.3□□□□□ -2.2
SCC2YDR180W ROM1P53046 1155 aa1.3□□□□□ -2.2
SCC2YDR180W YAF9P53930 226 aa1.3□□□□□ -2.2
SCC2YDR180W YOL036WQ08206 761 aa1.3□□□□□ -2.2
SCC2YDR180W CDC53Q12018 815 aaKnown RBP1.3□□□□□ -2.2
SCC2YDR180W YLR422WQ06409 1932 aa1.29□□□□□ -2.2
SCC2YDR180W CIT2P08679 460 aa1.29□□□□□ -2.2
SCC2YDR180W RPT1P33299 467 aaKnown RBP1.29□□□□□ -2.2
SCC2YDR180W MPE1P35728 441 aaKnown RBP1.29□□□□□ -2.2
SCC2YDR180W YEL023CP39992 682 aa1.29□□□□□ -2.2
SCC2YDR180W IOC3P43596 787 aa1.29□□□□□ -2.2
SCC2YDR180W RRP46P53256 223 aaPredicted RBP1.29□□□□□ -2.2
SCC2YDR180W TUB4P53378 473 aa1.29□□□□□ -2.2
SCC2YDR180W HAP5Q02516 242 aa1.29□□□□□ -2.2
SCC2YDR180W PUF6Q04373 656 aaKnown RBP1.29□□□□□ -2.2
SCC2YDR180W PSH1Q12161 406 aa1.29□□□□□ -2.2
SCC2YDR180W PSK1P31374 1356 aa1.29□□□□□ -2.2
SCC2YDR180W MHP1P43638 1398 aa1.29□□□□□ -2.2
SCC2YDR180W HTA1P04911 132 aaKnown RBP1.29□□□□□ -2.2
SCC2YDR180W HTA2P04912 132 aa1.29□□□□□ -2.2
SCC2YDR180W PRI2P20457 528 aa1.29□□□□□ -2.2
SCC2YDR180W MSP1P28737 362 aa1.29□□□□□ -2.2
SCC2YDR180W FOX2Q02207 900 aaKnown RBP1.29□□□□□ -2.2
SCC2YDR180W MIP1P15801 1254 aa1.29□□□□□ -2.2
SCC2YDR180W MET4P32389 672 aa1.29□□□□□ -2.2
SCC2YDR180W GCD11P32481 527 aaKnown RBP1.29□□□□□ -2.2
SCC2YDR180W RPS26AP39938 119 aaKnown RBP1.29□□□□□ -2.2
SCC2YDR180W RPS26BP39939 119 aaKnown RBP1.29□□□□□ -2.2
SCC2YDR180W RAD26P40352 1085 aa1.29□□□□□ -2.2
SCC2YDR180W CIR1P42940 261 aa1.29□□□□□ -2.2
SCC2YDR180W RSC8P43609 557 aaKnown RBP1.29□□□□□ -2.2
SCC2YDR180W POL31P46957 487 aa1.29□□□□□ -2.2
SCC2YDR180W YNL115CP53925 644 aa1.29□□□□□ -2.2
SCC2YDR180W AOS1Q06624 347 aa1.29□□□□□ -2.2
SCC2YDR180W ETT1Q08421 412 aaKnown RBP1.29□□□□□ -2.2
SCC2YDR180W SAM3Q08986 587 aa1.29□□□□□ -2.2
SCC2YDR180W RPP1BP10622 106 aaKnown RBP1.28□□□□□ -2.2
SCC2YDR180W SPT5P27692 1063 aaKnown RBP1.28□□□□□ -2.2
SCC2YDR180W YPP1P46951 817 aa1.28□□□□□ -2.2
SCC2YDR180W PUS6P53294 404 aa1.28□□□□□ -2.2
SCC2YDR180W FPR4Q06205 392 aaPredicted RBP1.28□□□□□ -2.2
SCC2YDR180W ARR2Q06597 130 aa1.28□□□□□ -2.2
SCC2YDR180W UBX5Q06682 500 aa1.28□□□□□ -2.2
SCC2YDR180W BUD21Q08492 214 aaPredicted RBP1.28□□□□□ -2.2
SCC2YDR180W WRS1Q12109 432 aaKnown RBP1.28□□□□□ -2.2
SCC2YDR180W MPH3P0CE00 602 aa1.28□□□□□ -2.2
SCC2YDR180W PDR1P12383 1068 aa1.28□□□□□ -2.2
SCC2YDR180W RPB10P22139 70 aa1.28□□□□□ -2.2
SCC2YDR180W RAD51P25454 400 aa1.28□□□□□ -2.2
SCC2YDR180W NUD1P32336 851 aa1.28□□□□□ -2.2
SCC2YDR180W NMD2P38798 1089 aaKnown RBP1.28□□□□□ -2.2
SCC2YDR180W CBC2Q08920 208 aaKnown RBP RIP-Chip data1.28□□□□□ -2.2not detected
SCC2YDR180W NOP14Q99207 810 aaKnown RBP1.28□□□□□ -2.2
SCC2YDR180W DRS2P39524 1355 aa1.28□□□□□ -2.2
SCC2YDR180W GAP1P19145 602 aaPredicted RBP1.28□□□□□ -2.2
SCC2YDR180W CLN1P20437 546 aa1.28□□□□□ -2.2
SCC2YDR180W VAN1P23642 535 aa1.28□□□□□ -2.2
SCC2YDR180W TOM20P35180 183 aa1.28□□□□□ -2.2
SCC2YDR180W BOI1P38041 980 aaKnown RBP1.28□□□□□ -2.2
SCC2YDR180W FIG4P42837 879 aa1.28□□□□□ -2.2
SCC2YDR180W JSN1P47135 1091 aaKnown RBP RIP-Chip data1.28□□□□□ -2.2not detected
SCC2YDR180W ALG12P53730 551 aa1.28□□□□□ -2.2
SCC2YDR180W MDG1P53885 366 aa1.28□□□□□ -2.2
SCC2YDR180W YNL011CP53980 444 aa1.28□□□□□ -2.2
SCC2YDR180W SML1Q04964 104 aa1.28□□□□□ -2.2
SCC2YDR180W TFB4Q12004 338 aa1.28□□□□□ -2.2
SCC2YDR180W MDS3P53094 1487 aa1.28□□□□□ -2.2
SCC2YDR180W TOP1P04786 769 aa1.28□□□□□ -2.21
SCC2YDR180W MSH3P25336 1018 aa1.28□□□□□ -2.21
SCC2YDR180W TBS1P38114 1094 aa1.28□□□□□ -2.21
SCC2YDR180W PAF1P38351 445 aa1.28□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 37.1 ms