RNA–Protein interactions for RNA: YDL190C

UFD2, Transcript of Ubiquitin chain assembly factor (E4), yeastyeast

Gene UFD2, Length 2,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD2YDL190C KAP122P32767 1081 aa2.39□□□□□ -2.03
UFD2YDL190C NGR1P32831 672 aaKnown RBP2.39□□□□□ -2.03
UFD2YDL190C SCD5P34758 872 aa2.39□□□□□ -2.03
UFD2YDL190C NCL1P38205 684 aaKnown RBP2.39□□□□□ -2.03
UFD2YDL190C FOX2Q02207 900 aaKnown RBP2.39□□□□□ -2.03
UFD2YDL190C YML020WQ03722 664 aa2.39□□□□□ -2.03
UFD2YDL190C TRS33Q99394 268 aa2.39□□□□□ -2.03
UFD2YDL190C SBP1P10080 294 aaKnown RBP2.39□□□□□ -2.03
UFD2YDL190C SSA4P22202 642 aaKnown RBP2.39□□□□□ -2.03
UFD2YDL190C KNS1P32350 737 aaPredicted RBP2.39□□□□□ -2.03
UFD2YDL190C UBP1P25037 809 aa2.39□□□□□ -2.03
UFD2YDL190C REV3P14284 1504 aa2.38□□□□□ -2.03
UFD2YDL190C QDR2P40474 542 aa2.38□□□□□ -2.03
UFD2YDL190C HXT5P38695 592 aa2.38□□□□□ -2.03
UFD2YDL190C CCT8P47079 568 aaKnown RBP2.38□□□□□ -2.03
UFD2YDL190C CUS1Q02554 436 aaPredicted RBP2.38□□□□□ -2.03
UFD2YDL190C HEH2Q03281 663 aa2.38□□□□□ -2.03
UFD2YDL190C UTP4Q06679 776 aaKnown RBP2.38□□□□□ -2.03
UFD2YDL190C SSK2P53599 1579 aa2.38□□□□□ -2.03
UFD2YDL190C MYO2P19524 1574 aaKnown RBP2.37□□□□□ -2.03
UFD2YDL190C DNF1P32660 1571 aa2.37□□□□□ -2.03
UFD2YDL190C MCX1P38323 520 aaPredicted RBP2.37□□□□□ -2.03
UFD2YDL190C MSC7P38694 644 aa2.37□□□□□ -2.03
UFD2YDL190C PUN1Q06991 263 aa2.37□□□□□ -2.03
UFD2YDL190C TAT1P38085 619 aa2.37□□□□□ -2.03
UFD2YDL190C ALG14P38242 237 aa2.37□□□□□ -2.03
UFD2YDL190C NOP8Q08287 484 aaPredicted RBP2.37□□□□□ -2.03
UFD2YDL190C PUP1P25043 261 aa2.36□□□□□ -2.03
UFD2YDL190C APM2P38700 605 aa2.36□□□□□ -2.03
UFD2YDL190C SLN1P39928 1220 aaPredicted RBP2.36□□□□□ -2.03
UFD2YDL190C PRK1P40494 810 aa2.36□□□□□ -2.03
UFD2YDL190C PEP1P32319 1579 aa2.36□□□□□ -2.03
UFD2YDL190C NAB2P32505 525 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
UFD2YDL190C PRY1P47032 299 aa2.36□□□□□ -2.03
UFD2YDL190C YNR040WP53736 256 aa2.36□□□□□ -2.03
UFD2YDL190C NHA1Q99271 985 aa2.36□□□□□ -2.03
UFD2YDL190C SUV3P32580 737 aa2.35□□□□□ -2.03
UFD2YDL190C ISC10P32645 267 aa2.35□□□□□ -2.03
UFD2YDL190C PGM2P37012 569 aaKnown RBP2.35□□□□□ -2.03
UFD2YDL190C SKN7P38889 622 aa2.35□□□□□ -2.03
UFD2YDL190C CAB1Q04430 367 aa2.35□□□□□ -2.03
UFD2YDL190C MRPL33P20084 86 aa2.35□□□□□ -2.03
UFD2YDL190C YCK2P23292 546 aaKnown RBP2.35□□□□□ -2.03
UFD2YDL190C VMA3P25515 160 aa2.35□□□□□ -2.03
UFD2YDL190C LDH1P38139 375 aa2.35□□□□□ -2.03
UFD2YDL190C YBR197CP38306 217 aa2.35□□□□□ -2.03
UFD2YDL190C ALD4P46367 519 aaKnown RBP2.35□□□□□ -2.03
UFD2YDL190C SKP1P52286 194 aa2.35□□□□□ -2.03
UFD2YDL190C MCA1Q08601 432 aa2.35□□□□□ -2.03
UFD2YDL190C YDR215CQ12240 137 aa2.35□□□□□ -2.03
UFD2YDL190C IRC20Q06554 1556 aa2.35□□□□□ -2.03
UFD2YDL190C DYS1P38791 387 aa2.35□□□□□ -2.03
UFD2YDL190C RPL34AP87262 121 aaPredicted RBP2.35□□□□□ -2.03
UFD2YDL190C YML083CQ04526 418 aa2.35□□□□□ -2.03
UFD2YDL190C NOB1Q08444 459 aaKnown RBP2.35□□□□□ -2.03
UFD2YDL190C PUF6Q04373 656 aaKnown RBP2.34□□□□□ -2.03
UFD2YDL190C RPC31P17890 251 aa2.34□□□□□ -2.04
UFD2YDL190C NAR1P23503 491 aaKnown RBP2.33□□□□□ -2.04
UFD2YDL190C BSD2P38356 321 aa2.33□□□□□ -2.04
UFD2YDL190C TPS3P38426 1054 aaKnown RBP2.33□□□□□ -2.04
UFD2YDL190C LSB6P42951 607 aa2.33□□□□□ -2.04
UFD2YDL190C YJL181WP46987 611 aa2.33□□□□□ -2.04
UFD2YDL190C MDS3P53094 1487 aa2.33□□□□□ -2.04
UFD2YDL190C SRS2P12954 1174 aa2.33□□□□□ -2.04
UFD2YDL190C CDC3P32457 520 aaKnown RBP2.33□□□□□ -2.04
UFD2YDL190C GIP1P38229 639 aa2.33□□□□□ -2.04
UFD2YDL190C AMN1P38285 549 aaPredicted RBP2.33□□□□□ -2.04
UFD2YDL190C FIR1P40020 876 aa2.33□□□□□ -2.04
UFD2YDL190C YOR296WQ08748 1289 aa2.33□□□□□ -2.04
UFD2YDL190C RRM3P38766 723 aa2.32□□□□□ -2.04
UFD2YDL190C ITC1P53125 1264 aa2.32□□□□□ -2.04
UFD2YDL190C GIS4Q04233 774 aa2.32□□□□□ -2.04
UFD2YDL190C MRP10O75012 95 aa2.32□□□□□ -2.04
UFD2YDL190C IDI1P15496 288 aa2.32□□□□□ -2.04
UFD2YDL190C RRN6P32786 894 aa2.32□□□□□ -2.04
UFD2YDL190C ISW1P38144 1129 aa2.32□□□□□ -2.04
UFD2YDL190C SUT1P53032 299 aaKnown RBP2.32□□□□□ -2.04
UFD2YDL190C NRD1P53617 575 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
UFD2YDL190C PNP1Q05788 311 aa2.32□□□□□ -2.04
UFD2YDL190C GAS5Q08193 484 aa2.32□□□□□ -2.04
UFD2YDL190C YBR287WP38355 427 aa2.31□□□□□ -2.04
UFD2YDL190C BUD9P53226 547 aa2.31□□□□□ -2.04
UFD2YDL190C SOK2P53438 785 aaPredicted RBP2.31□□□□□ -2.04
UFD2YDL190C YPL034WQ03083 165 aa2.31□□□□□ -2.04
UFD2YDL190C MSN1P22148 382 aa2.31□□□□□ -2.04
UFD2YDL190C SLD2P34252 453 aa2.31□□□□□ -2.04
UFD2YDL190C PPT1P53043 513 aa2.31□□□□□ -2.04
UFD2YDL190C RSC2Q06488 889 aa2.31□□□□□ -2.04
UFD2YDL190C TED1P40533 473 aa2.31□□□□□ -2.04
UFD2YDL190C LTE1P07866 1435 aa2.31□□□□□ -2.04
UFD2YDL190C MAC1P35192 417 aa2.3□□□□□ -2.04
UFD2YDL190C SSF1P38789 453 aaPredicted RBP2.3□□□□□ -2.04
UFD2YDL190C GIP2P40036 548 aa2.3□□□□□ -2.04
UFD2YDL190C HXT8P40886 569 aa2.3□□□□□ -2.04
UFD2YDL190C FUR4P05316 633 aaKnown RBP2.3□□□□□ -2.04
UFD2YDL190C AIM46P38885 310 aa2.3□□□□□ -2.04
UFD2YDL190C YER156CP40093 338 aaKnown RBP2.3□□□□□ -2.04
UFD2YDL190C ALO1P54783 526 aaKnown RBP2.3□□□□□ -2.04
UFD2YDL190C CWC15Q03772 175 aaKnown RBP2.3□□□□□ -2.04
UFD2YDL190C ESC1Q03661 1658 aaKnown RBP2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 481.8 ms