RNA–Protein interactions for RNA: YDL150W

RPC53, Transcript of RNA polymerase III subunit C53, yeast

Gene RPC53, Length 1,269 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	YDL150W	SUV3	P32580	737 aa		7.71	□□□□□ -1.18
RPC53	YDL150W	RLF2	Q12495	606 aa		7.71	□□□□□ -1.18
RPC53	YDL150W	RPC31	P17890	251 aa		7.7	□□□□□ -1.18
RPC53	YDL150W	KAP122	P32767	1081 aa		7.7	□□□□□ -1.18
RPC53	YDL150W	MCX1	P38323	520 aa	Predicted RBP	7.7	□□□□□ -1.18
RPC53	YDL150W	HEH2	Q03281	663 aa		7.7	□□□□□ -1.18
RPC53	YDL150W	THO2	P53552	1597 aa	Known RBP	7.69	□□□□□ -1.18
RPC53	YDL150W	MTO1	P53070	669 aa		7.69	□□□□□ -1.18
RPC53	YDL150W	CAB1	Q04430	367 aa		7.69	□□□□□ -1.18
RPC53	YDL150W	TDA6	Q06466	467 aa		7.69	□□□□□ -1.18
RPC53	YDL150W	YPR053C	Q6Q5F3	151 aa		7.69	□□□□□ -1.18
RPC53	YDL150W	HIR3	P47171	1648 aa		7.68	□□□□□ -1.18
RPC53	YDL150W	SKN7	P38889	622 aa		7.68	□□□□□ -1.18
RPC53	YDL150W	LSB3	P43603	459 aa	Known RBP	7.68	□□□□□ -1.18
RPC53	YDL150W	CWH41	P53008	833 aa		7.68	□□□□□ -1.18
RPC53	YDL150W	CCT8	P47079	568 aa	Known RBP	7.67	□□□□□ -1.18
RPC53	YDL150W	CUS1	Q02554	436 aa	Predicted RBP	7.67	□□□□□ -1.18
RPC53	YDL150W	MET1	P36150	593 aa		7.66	□□□□□ -1.18
RPC53	YDL150W	UBX7	P38349	436 aa		7.66	□□□□□ -1.18
RPC53	YDL150W	YNR014W	P53719	212 aa		7.65	□□□□□ -1.18
RPC53	YDL150W	PUF6	Q04373	656 aa	Known RBP	7.65	□□□□□ -1.18
RPC53	YDL150W	MDS3	P53094	1487 aa		7.64	□□□□□ -1.19
RPC53	YDL150W	NCL1	P38205	684 aa	Known RBP	7.64	□□□□□ -1.19
RPC53	YDL150W	BOI2	P39969	1040 aa		7.64	□□□□□ -1.19
RPC53	YDL150W	PRK1	P40494	810 aa		7.64	□□□□□ -1.19
RPC53	YDL150W	MRPL33	P20084	86 aa		7.63	□□□□□ -1.19
RPC53	YDL150W	APM2	P38700	605 aa		7.63	□□□□□ -1.19
RPC53	YDL150W	QDR2	P40474	542 aa		7.63	□□□□□ -1.19
RPC53	YDL150W	YMR187C	Q03236	431 aa		7.63	□□□□□ -1.19
RPC53	YDL150W	YBR197C	P38306	217 aa		7.62	□□□□□ -1.19
RPC53	YDL150W	SSA4	P22202	642 aa	Known RBP	7.61	□□□□□ -1.19
RPC53	YDL150W	YNR040W	P53736	256 aa		7.61	□□□□□ -1.19
RPC53	YDL150W	YCK2	P23292	546 aa	Known RBP	7.6	□□□□□ -1.19
RPC53	YDL150W	VMA3	P25515	160 aa		7.6	□□□□□ -1.19
RPC53	YDL150W	YDR215C	Q12240	137 aa		7.6	□□□□□ -1.19
RPC53	YDL150W	ALD4	P46367	519 aa	Known RBP	7.59	□□□□□ -1.19
RPC53	YDL150W	CWC15	Q03772	175 aa	Known RBP	7.59	□□□□□ -1.19
RPC53	YDL150W	NOB1	Q08444	459 aa	Known RBP	7.59	□□□□□ -1.19
RPC53	YDL150W	YOR296W	Q08748	1289 aa		7.58	□□□□□ -1.2
RPC53	YDL150W	SRS2	P12954	1174 aa		7.57	□□□□□ -1.2
RPC53	YDL150W	DYS1	P38791	387 aa		7.57	□□□□□ -1.2
RPC53	YDL150W	YER156C	P40093	338 aa	Known RBP	7.57	□□□□□ -1.2
RPC53	YDL150W	ITC1	P53125	1264 aa		7.57	□□□□□ -1.2
RPC53	YDL150W	YML083C	Q04526	418 aa		7.57	□□□□□ -1.2
RPC53	YDL150W	REV3	P14284	1504 aa		7.57	□□□□□ -1.2
RPC53	YDL150W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	7.56	□□□□□ -1.2	not detected
RPC53	YDL150W	FOX2	Q02207	900 aa	Known RBP	7.56	□□□□□ -1.2
RPC53	YDL150W	IDI1	P15496	288 aa		7.55	□□□□□ -1.2
RPC53	YDL150W	PUN1	Q06991	263 aa		7.55	□□□□□ -1.2
RPC53	YDL150W	NAR1	P23503	491 aa	Known RBP	7.54	□□□□□ -1.2
RPC53	YDL150W	ISC10	P32645	267 aa		7.54	□□□□□ -1.2
RPC53	YDL150W	PGM2	P37012	569 aa	Known RBP	7.54	□□□□□ -1.2
RPC53	YDL150W	GIS4	Q04233	774 aa		7.54	□□□□□ -1.2
RPC53	YDL150W	NHA1	Q99271	985 aa		7.54	□□□□□ -1.2
RPC53	YDL150W	LDH1	P38139	375 aa		7.53	□□□□□ -1.2
RPC53	YDL150W	GIP1	P38229	639 aa		7.53	□□□□□ -1.2
RPC53	YDL150W	TPS3	P38426	1054 aa	Known RBP	7.53	□□□□□ -1.2
RPC53	YDL150W	SLN1	P39928	1220 aa	Predicted RBP	7.53	□□□□□ -1.2
RPC53	YDL150W	PEP1	P32319	1579 aa		7.53	□□□□□ -1.2
RPC53	YDL150W	ALG14	P38242	237 aa		7.52	□□□□□ -1.21
RPC53	YDL150W	XRN1	P22147	1528 aa	Known RBP	7.52	□□□□□ -1.21
RPC53	YDL150W	BSD2	P38356	321 aa		7.51	□□□□□ -1.21
RPC53	YDL150W	MRP10	O75012	95 aa		7.49	□□□□□ -1.21
RPC53	YDL150W	ISW1	P38144	1129 aa		7.49	□□□□□ -1.21
RPC53	YDL150W	APC11	Q12157	165 aa		7.49	□□□□□ -1.21
RPC53	YDL150W	MSN1	P22148	382 aa		7.48	□□□□□ -1.21
RPC53	YDL150W	AMN1	P38285	549 aa	Predicted RBP	7.48	□□□□□ -1.21
RPC53	YDL150W	BUD9	P53226	547 aa		7.48	□□□□□ -1.21
RPC53	YDL150W	PNP1	Q05788	311 aa		7.48	□□□□□ -1.21
RPC53	YDL150W	SUB2	Q07478	446 aa	Known RBP	7.48	□□□□□ -1.21
RPC53	YDL150W	SLP1	Q12232	587 aa		7.48	□□□□□ -1.21
RPC53	YDL150W	PRY1	P47032	299 aa		7.47	□□□□□ -1.21
RPC53	YDL150W	BPT1	P14772	1559 aa		7.46	□□□□□ -1.21
RPC53	YDL150W	KTR2	P33550	425 aa		7.46	□□□□□ -1.22
RPC53	YDL150W	TAT1	P38085	619 aa		7.46	□□□□□ -1.22
RPC53	YDL150W	YIL165C	P40446	119 aa		7.46	□□□□□ -1.22
RPC53	YDL150W	RSC2	Q06488	889 aa		7.46	□□□□□ -1.22
RPC53	YDL150W	MCA1	Q08601	432 aa		7.45	□□□□□ -1.22
RPC53	YDL150W	LSO1	Q3E827	93 aa		7.45	□□□□□ -1.22
RPC53	YDL150W	BOI1	P38041	980 aa	Known RBP	7.44	□□□□□ -1.22
RPC53	YDL150W	LSB6	P42951	607 aa		7.44	□□□□□ -1.22
RPC53	YDL150W	ATG2	P53855	1592 aa		7.43	□□□□□ -1.22
RPC53	YDL150W	AI3	P03877	415 aa		7.43	□□□□□ -1.22
RPC53	YDL150W	RRN6	P32786	894 aa		7.43	□□□□□ -1.22
RPC53	YDL150W	HXT8	P40886	569 aa		7.43	□□□□□ -1.22
RPC53	YDL150W	YBR287W	P38355	427 aa		7.42	□□□□□ -1.22
RPC53	YDL150W	YPL034W	Q03083	165 aa		7.42	□□□□□ -1.22
RPC53	YDL150W	EMG1	Q06287	252 aa	Known RBP	7.42	□□□□□ -1.22
RPC53	YDL150W	SFA1	P32771	386 aa		7.41	□□□□□ -1.22
RPC53	YDL150W	PPT1	P53043	513 aa		7.41	□□□□□ -1.22
RPC53	YDL150W	NTA1	P40354	457 aa		7.4	□□□□□ -1.22
RPC53	YDL150W	RGD2	P43556	714 aa		7.4	□□□□□ -1.22
RPC53	YDL150W	RRM3	P38766	723 aa		7.39	□□□□□ -1.23
RPC53	YDL150W	TY4B-P	A0A0B7P3V8	1104 aa		7.38	□□□□□ -1.23
RPC53	YDL150W	PGM1	P33401	570 aa	Known RBP	7.38	□□□□□ -1.23
RPC53	YDL150W	BOL3	P39724	118 aa		7.38	□□□□□ -1.23
RPC53	YDL150W	FIR1	P40020	876 aa		7.38	□□□□□ -1.23
RPC53	YDL150W	TY4A-H	Q6Q5P6	413 aa		7.38	□□□□□ -1.23
RPC53	YDL150W	SBP1	P10080	294 aa	Known RBP	7.37	□□□□□ -1.23
RPC53	YDL150W	SAC7	P17121	654 aa		7.37	□□□□□ -1.23

Retrieved 100 of 5,963 RNA–protein pairs in 43.2 ms