RNA–Protein interactions for RNA: YDL097C

RPN6, Transcript of Essential, non-ATPase regulatory subunit of the 26S proteasome lid, yeastyeast

Gene RPN6, Length 1,305 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN6YDL097C ULP1Q02724 621 aa6.23□□□□□ -1.41
RPN6YDL097C YPR015CQ12531 247 aa6.22□□□□□ -1.41
RPN6YDL097C PMD1P32634 1753 aa6.21□□□□□ -1.41
RPN6YDL097C TEA1P47988 759 aa6.21□□□□□ -1.42
RPN6YDL097C RAT1Q02792 1006 aaKnown RBP6.21□□□□□ -1.42
RPN6YDL097C INP54Q08227 384 aaKnown RBP6.21□□□□□ -1.42
RPN6YDL097C YLR225CQ05948 407 aaKnown RBP6.2□□□□□ -1.42
RPN6YDL097C GYP1Q08484 637 aa6.2□□□□□ -1.42
RPN6YDL097C TRK1P12685 1235 aa6.19□□□□□ -1.42
RPN6YDL097C GAS4Q08271 471 aa6.19□□□□□ -1.42
RPN6YDL097C ASH1P34233 588 aa6.18□□□□□ -1.42
RPN6YDL097C WHI3P34761 661 aaKnown RBP6.18□□□□□ -1.42
RPN6YDL097C STV1P37296 890 aa6.18□□□□□ -1.42
RPN6YDL097C LDH1P38139 375 aa6.18□□□□□ -1.42
RPN6YDL097C FIR1P40020 876 aa6.18□□□□□ -1.42
RPN6YDL097C YDR034W-BQ6Q5X2 51 aa6.18□□□□□ -1.42
RPN6YDL097C GSC2P40989 1895 aa6.18□□□□□ -1.42
RPN6YDL097C AMS1P22855 1083 aa6.17□□□□□ -1.42
RPN6YDL097C HSP104P31539 908 aaKnown RBP6.17□□□□□ -1.42
RPN6YDL097C SER1P33330 395 aaKnown RBP6.17□□□□□ -1.42
RPN6YDL097C YHR131CP38835 850 aa6.17□□□□□ -1.42
RPN6YDL097C PSF2P40359 213 aa6.17□□□□□ -1.42
RPN6YDL097C NOP7P53261 605 aaKnown RBP6.17□□□□□ -1.42
RPN6YDL097C AHC1Q12433 566 aa6.17□□□□□ -1.42
RPN6YDL097C SSM4P40318 1319 aa6.17□□□□□ -1.42
RPN6YDL097C CUP1-1P0CX80 61 aa6.16□□□□□ -1.42
RPN6YDL097C CUP1-2P0CX81 61 aa6.16□□□□□ -1.42
RPN6YDL097C RPN1P38764 993 aaKnown RBP6.16□□□□□ -1.42
RPN6YDL097C VPS62P53285 467 aa6.16□□□□□ -1.42
RPN6YDL097C LEO1P38439 464 aa6.15□□□□□ -1.43
RPN6YDL097C YNR014WP53719 212 aa6.15□□□□□ -1.43
RPN6YDL097C SAS4Q04003 481 aa6.15□□□□□ -1.43
RPN6YDL097C DIB1Q06819 143 aaPredicted RBP6.15□□□□□ -1.43
RPN6YDL097C SPE2P21182 396 aa6.14□□□□□ -1.43
RPN6YDL097C RAM1P22007 431 aa6.14□□□□□ -1.43
RPN6YDL097C SPR3P41901 512 aa6.14□□□□□ -1.43
RPN6YDL097C CRF1Q04930 467 aa6.14□□□□□ -1.43
RPN6YDL097C LYS2P07702 1392 aa6.14□□□□□ -1.43
RPN6YDL097C TEL1P38110 2787 aa6.14□□□□□ -1.43
RPN6YDL097C FAB1P34756 2278 aa6.13□□□□□ -1.43
RPN6YDL097C IKI3Q06706 1349 aaKnown RBP6.12□□□□□ -1.43
RPN6YDL097C CBP1P07252 654 aa6.12□□□□□ -1.43
RPN6YDL097C FRD1P32614 470 aaKnown RBP6.12□□□□□ -1.43
RPN6YDL097C AFG2P32794 780 aa6.12□□□□□ -1.43
RPN6YDL097C SEN54Q02825 467 aaPredicted RBP6.12□□□□□ -1.43
RPN6YDL097C ISU2Q12056 156 aa6.12□□□□□ -1.43
RPN6YDL097C YFR016CP43597 1233 aaKnown RBP6.11□□□□□ -1.43
RPN6YDL097C NOP53Q12080 455 aaKnown RBP6.11□□□□□ -1.43
RPN6YDL097C YFL040WP43562 540 aa6.1□□□□□ -1.43
RPN6YDL097C ECM30Q06673 1274 aa6.1□□□□□ -1.43
RPN6YDL097C UTP10P42945 1769 aaKnown RBP6.1□□□□□ -1.43
RPN6YDL097C YGL082WP53155 381 aa6.09□□□□□ -1.43
RPN6YDL097C MDG1P53885 366 aa6.09□□□□□ -1.43
RPN6YDL097C UBP16Q02863 499 aa6.09□□□□□ -1.43
RPN6YDL097C RMT2Q03305 412 aa6.09□□□□□ -1.43
RPN6YDL097C CDC73Q06697 393 aa6.09□□□□□ -1.43
RPN6YDL097C KEX1P09620 729 aa6.08□□□□□ -1.44
RPN6YDL097C PDR1P12383 1068 aa6.08□□□□□ -1.44
RPN6YDL097C RRG1Q12167 365 aaPredicted RBP6.08□□□□□ -1.44
RPN6YDL097C YPL034WQ03083 165 aa6.07□□□□□ -1.44
RPN6YDL097C HKR1P41809 1802 aa6.06□□□□□ -1.44
RPN6YDL097C RTF1P53064 558 aa6.06□□□□□ -1.44
RPN6YDL097C NUP145P49687 1317 aa6.06□□□□□ -1.44
RPN6YDL097C HIP1P06775 603 aa6.05□□□□□ -1.44
RPN6YDL097C MSC7P38694 644 aa6.05□□□□□ -1.44
RPN6YDL097C GAS5Q08193 484 aa6.05□□□□□ -1.44
RPN6YDL097C PHM7Q12252 991 aa6.05□□□□□ -1.44
RPN6YDL097C KIP3P53086 805 aaKnown RBP6.04□□□□□ -1.44
RPN6YDL097C SYF1Q04048 859 aaPredicted RBP6.04□□□□□ -1.44
RPN6YDL097C YEL077CQ3E7X8 1277 aa6.04□□□□□ -1.44
RPN6YDL097C YPL062WQ02781 134 aa6.03□□□□□ -1.44
RPN6YDL097C ATG1P53104 897 aa6.02□□□□□ -1.45
RPN6YDL097C GAL2P13181 574 aa6.01□□□□□ -1.45
RPN6YDL097C PDI1P17967 522 aaKnown RBP6.01□□□□□ -1.45
RPN6YDL097C UIP5P36137 443 aa6.01□□□□□ -1.45
RPN6YDL097C FMP30Q02883 468 aa6.01□□□□□ -1.45
RPN6YDL097C YML133CQ03099 1374 aa6.01□□□□□ -1.45
RPN6YDL097C FLO1P32768 1537 aa6.01□□□□□ -1.45
RPN6YDL097C SEC3P33332 1336 aaKnown RBP6.01□□□□□ -1.45
RPN6YDL097C IXR1P33417 597 aa5.99□□□□□ -1.45
RPN6YDL097C ERG7P38604 731 aa5.99□□□□□ -1.45
RPN6YDL097C ZDS2P54786 942 aa5.99□□□□□ -1.45
RPN6YDL097C YOR131CQ12486 218 aa5.99□□□□□ -1.45
RPN6YDL097C NIT1P40447 199 aa5.99□□□□□ -1.45
RPN6YDL097C VID30P53076 958 aa5.99□□□□□ -1.45
RPN6YDL097C GIN4Q12263 1142 aa5.99□□□□□ -1.45
RPN6YDL097C GSM1P42950 618 aa5.98□□□□□ -1.45
RPN6YDL097C GBP2P25555 427 aaKnown RBP RIP-Chip data5.97□□□□□ -1.45not detected
RPN6YDL097C GAR1P28007 205 aaKnown RBP5.97□□□□□ -1.45
RPN6YDL097C MRF1P30775 413 aaPredicted RBP5.97□□□□□ -1.45
RPN6YDL097C HAT1Q12341 374 aa5.97□□□□□ -1.45
RPN6YDL097C GCN1P33892 2672 aaKnown RBP5.96□□□□□ -1.45
RPN6YDL097C FLO11P08640 1367 aa5.96□□□□□ -1.46
RPN6YDL097C DSF2P38213 736 aa5.96□□□□□ -1.46
RPN6YDL097C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.96□□□□□ -1.46not detected
RPN6YDL097C YLR326WQ06170 240 aaKnown RBP5.96□□□□□ -1.46
RPN6YDL097C ALE1Q08548 619 aa5.96□□□□□ -1.46
RPN6YDL097C SSP2Q08646 371 aa5.96□□□□□ -1.46
RPN6YDL097C DAP1Q12091 152 aa5.96□□□□□ -1.46
RPN6YDL097C MAM3Q12296 706 aa5.96□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 70 ms