RNA–Protein interactions for RNA: YDL076C

RXT3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene RXT3, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RXT3YDL076C SLY41P22215 453 aa6.13□□□□□ -1.43
RXT3YDL076C YML020WQ03722 664 aa6.13□□□□□ -1.43
RXT3YDL076C SPT5P27692 1063 aaKnown RBP6.12□□□□□ -1.43
RXT3YDL076C NOP7P53261 605 aaKnown RBP6.12□□□□□ -1.43
RXT3YDL076C BCK1Q01389 1478 aa6.12□□□□□ -1.43
RXT3YDL076C ENT1Q12518 454 aa6.12□□□□□ -1.43
RXT3YDL076C TTI1P36097 1038 aa6.11□□□□□ -1.43
RXT3YDL076C SLX8P40072 274 aa6.11□□□□□ -1.43
RXT3YDL076C CAB1Q04430 367 aa6.11□□□□□ -1.43
RXT3YDL076C UBP1P25037 809 aa6.1□□□□□ -1.43
RXT3YDL076C ALD4P46367 519 aaKnown RBP6.1□□□□□ -1.43
RXT3YDL076C NRD1P53617 575 aaKnown RBP RIP-Chip data6.1□□□□□ -1.43 RIP-Chip
RXT3YDL076C IMH1Q06704 911 aaKnown RBP6.1□□□□□ -1.43
RXT3YDL076C RAV1P47104 1357 aa6.09□□□□□ -1.43
RXT3YDL076C IXR1P33417 597 aa6.09□□□□□ -1.43
RXT3YDL076C TAF5P38129 798 aa6.09□□□□□ -1.43
RXT3YDL076C RPL34AP87262 121 aaPredicted RBP6.09□□□□□ -1.43
RXT3YDL076C MAK16P10962 306 aaPredicted RBP6.08□□□□□ -1.44
RXT3YDL076C SUP45P12385 437 aaKnown RBP6.08□□□□□ -1.44
RXT3YDL076C SSM4P40318 1319 aa6.07□□□□□ -1.44
RXT3YDL076C ENO2P00925 437 aaKnown RBP6.07□□□□□ -1.44
RXT3YDL076C MDJ1P35191 511 aa6.07□□□□□ -1.44
RXT3YDL076C SIS2P36024 562 aa6.07□□□□□ -1.44
RXT3YDL076C RTC1Q08281 1341 aa6.06□□□□□ -1.44
RXT3YDL076C ENO1P00924 437 aaKnown RBP6.06□□□□□ -1.44
RXT3YDL076C TRM1P15565 570 aaKnown RBP6.06□□□□□ -1.44
RXT3YDL076C YDJ1P25491 409 aaKnown RBP6.06□□□□□ -1.44
RXT3YDL076C PRP45P28004 379 aaPredicted RBP6.06□□□□□ -1.44
RXT3YDL076C RSC30P38781 883 aa6.06□□□□□ -1.44
RXT3YDL076C LSC2P53312 427 aa6.06□□□□□ -1.44
RXT3YDL076C UBP2Q01476 1272 aa6.06□□□□□ -1.44
RXT3YDL076C TBF1Q02457 562 aa6.06□□□□□ -1.44
RXT3YDL076C PHM7Q12252 991 aa6.06□□□□□ -1.44
RXT3YDL076C RAD9P14737 1309 aa6.05□□□□□ -1.44
RXT3YDL076C MRT4P33201 236 aaKnown RBP6.05□□□□□ -1.44
RXT3YDL076C NOP8Q08287 484 aaPredicted RBP6.05□□□□□ -1.44
RXT3YDL076C DPH6Q12429 685 aa6.05□□□□□ -1.44
RXT3YDL076C NUP192P47054 1683 aa6.04□□□□□ -1.44
RXT3YDL076C SCT1P32784 759 aa6.04□□□□□ -1.44
RXT3YDL076C ESL2P36168 1195 aa6.04□□□□□ -1.44
RXT3YDL076C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.04□□□□□ -1.44not detected
RXT3YDL076C YPP1P46951 817 aa6.04□□□□□ -1.44
RXT3YDL076C PUS6P53294 404 aa6.04□□□□□ -1.44
RXT3YDL076C ROG3P43602 733 aa6.03□□□□□ -1.44
RXT3YDL076C RIM21P48565 533 aa6.03□□□□□ -1.44
RXT3YDL076C NAF1P53919 492 aaKnown RBP6.03□□□□□ -1.44
RXT3YDL076C ALR1Q08269 859 aa6.03□□□□□ -1.44
RXT3YDL076C NOB1Q08444 459 aaKnown RBP6.03□□□□□ -1.44
RXT3YDL076C ARG82P07250 355 aa6.02□□□□□ -1.45
RXT3YDL076C YJL181WP46987 611 aa6.02□□□□□ -1.45
RXT3YDL076C MRX10Q05648 414 aa6.02□□□□□ -1.45
RXT3YDL076C EDE1P34216 1381 aa6.02□□□□□ -1.45
RXT3YDL076C CDC3P32457 520 aaKnown RBP6.01□□□□□ -1.45
RXT3YDL076C DLD1P32891 587 aa6.01□□□□□ -1.45
RXT3YDL076C AAD14P42884 376 aa6.01□□□□□ -1.45
RXT3YDL076C YDL206WQ12424 762 aa6.01□□□□□ -1.45
RXT3YDL076C YRF1-2P40105 1681 aa6.01□□□□□ -1.45
RXT3YDL076C PRP5P21372 849 aaPredicted RBP6□□□□□ -1.45
RXT3YDL076C PUP1P25043 261 aa6□□□□□ -1.45
RXT3YDL076C UGA2P38067 497 aa6□□□□□ -1.45
RXT3YDL076C MCM16Q12262 181 aa6□□□□□ -1.45
RXT3YDL076C TCB1Q12466 1186 aa6□□□□□ -1.45
RXT3YDL076C TY3B-IQ7LHG5 1498 aaKnown RBP6□□□□□ -1.45
RXT3YDL076C ENP1P38333 483 aaKnown RBP5.99□□□□□ -1.45
RXT3YDL076C NSG2P53898 299 aa5.99□□□□□ -1.45
RXT3YDL076C TAF8Q03750 510 aa5.99□□□□□ -1.45
RXT3YDL076C TY1A-MR1Q04215 440 aa5.99□□□□□ -1.45
RXT3YDL076C YML083CQ04526 418 aa5.99□□□□□ -1.45
RXT3YDL076C SLD2P34252 453 aa5.98□□□□□ -1.45
RXT3YDL076C TGL4P36165 910 aa5.98□□□□□ -1.45
RXT3YDL076C YJR098CP47139 656 aa5.98□□□□□ -1.45
RXT3YDL076C RPA14P50106 137 aa5.98□□□□□ -1.45
RXT3YDL076C RCM1P53972 490 aa5.98□□□□□ -1.45
RXT3YDL076C YEF3P16521 1044 aaKnown RBP5.97□□□□□ -1.45
RXT3YDL076C YPR097WQ06839 1073 aa5.97□□□□□ -1.45
RXT3YDL076C RRP5Q05022 1729 aaKnown RBP5.96□□□□□ -1.45
RXT3YDL076C PRP40P33203 583 aaKnown RBP5.96□□□□□ -1.46
RXT3YDL076C OSH7P38755 437 aa5.96□□□□□ -1.46
RXT3YDL076C ALD2P47771 506 aa5.96□□□□□ -1.46
RXT3YDL076C CCP1P00431 361 aa5.95□□□□□ -1.46
RXT3YDL076C KTR7P40504 517 aa5.95□□□□□ -1.46
RXT3YDL076C ROM2P51862 1356 aaKnown RBP5.94□□□□□ -1.46
RXT3YDL076C ISF1P32488 338 aa5.94□□□□□ -1.46
RXT3YDL076C YBL086CP38177 466 aa5.94□□□□□ -1.46
RXT3YDL076C RPN11P43588 306 aaKnown RBP5.94□□□□□ -1.46
RXT3YDL076C LYS5P50113 272 aa5.94□□□□□ -1.46
RXT3YDL076C TEC1P18412 486 aa5.93□□□□□ -1.46
RXT3YDL076C RDS2P19541 446 aaKnown RBP5.93□□□□□ -1.46
RXT3YDL076C PEP12P32854 288 aa5.93□□□□□ -1.46
RXT3YDL076C SSF1P38789 453 aaPredicted RBP5.93□□□□□ -1.46
RXT3YDL076C ATG3P40344 310 aa5.93□□□□□ -1.46
RXT3YDL076C EMP47P43555 445 aa5.93□□□□□ -1.46
RXT3YDL076C ECM23Q02710 187 aa5.93□□□□□ -1.46
RXT3YDL076C THI72Q08579 599 aa5.93□□□□□ -1.46
RXT3YDL076C JJJ3P47138 172 aa5.92□□□□□ -1.46
RXT3YDL076C HAT1Q12341 374 aa5.92□□□□□ -1.46
RXT3YDL076C LEU2P04173 364 aaPredicted RBP5.91□□□□□ -1.46
RXT3YDL076C GUT2P32191 649 aa5.91□□□□□ -1.46
RXT3YDL076C MTR4P47047 1073 aaKnown RBP5.91□□□□□ -1.46
RXT3YDL076C CCT8P47079 568 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 70.6 ms