RNA–Protein interactions for RNA: YDL013W

SLX5, Transcript of Subunit of the Slx5-Slx8 SUMO-targeted ubiquitin ligase complex, yeastyeast

Gene SLX5, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX5YDL013W TY1A-DR1Q03856 440 aa7.39□□□□□ -1.23
SLX5YDL013W TY1A-ML1Q04706 440 aaKnown RBP7.39□□□□□ -1.23
SLX5YDL013W TY1A-BRQ12217 440 aa7.39□□□□□ -1.23
SLX5YDL013W YLL054CQ12244 843 aa7.39□□□□□ -1.23
SLX5YDL013W TY1A-NL2Q12470 440 aa7.39□□□□□ -1.23
SLX5YDL013W TY1A-GR2Q12485 440 aa7.39□□□□□ -1.23
SLX5YDL013W DRS2P39524 1355 aa7.39□□□□□ -1.23
SLX5YDL013W RAD51P25454 400 aa7.38□□□□□ -1.23
SLX5YDL013W SPC42P36094 363 aa7.38□□□□□ -1.23
SLX5YDL013W ARH1P48360 493 aa7.38□□□□□ -1.23
SLX5YDL013W RPA14P50106 137 aa7.38□□□□□ -1.23
SLX5YDL013W NUP170P38181 1502 aa7.38□□□□□ -1.23
SLX5YDL013W GDB1Q06625 1536 aa7.38□□□□□ -1.23
SLX5YDL013W MSH3P25336 1018 aa7.38□□□□□ -1.23
SLX5YDL013W GIR2Q03768 265 aaPredicted RBP7.38□□□□□ -1.23
SLX5YDL013W GAL11P19659 1081 aa7.37□□□□□ -1.23
SLX5YDL013W GAL2P13181 574 aa7.36□□□□□ -1.23
SLX5YDL013W YPR097WQ06839 1073 aa7.36□□□□□ -1.23
SLX5YDL013W BUD20Q08004 166 aaPredicted RBP7.36□□□□□ -1.23
SLX5YDL013W TEC1P18412 486 aa7.36□□□□□ -1.23
SLX5YDL013W BYE1P36106 594 aa7.36□□□□□ -1.23
SLX5YDL013W UBX7P38349 436 aa7.36□□□□□ -1.23
SLX5YDL013W AIM20P40451 204 aa7.36□□□□□ -1.23
SLX5YDL013W SEC27P41811 889 aaKnown RBP7.36□□□□□ -1.23
SLX5YDL013W RSC8P43609 557 aaKnown RBP7.36□□□□□ -1.23
SLX5YDL013W SEN54Q02825 467 aaPredicted RBP7.36□□□□□ -1.23
SLX5YDL013W CEF1Q03654 590 aaPredicted RBP7.36□□□□□ -1.23
SLX5YDL013W YDR344CQ05510 147 aa7.36□□□□□ -1.23
SLX5YDL013W CLF1Q12309 687 aaPredicted RBP7.36□□□□□ -1.23
SLX5YDL013W GEA1P47102 1408 aaPredicted RBP7.36□□□□□ -1.23
SLX5YDL013W NUP157P40064 1391 aaKnown RBP7.35□□□□□ -1.23
SLX5YDL013W TY3B-GQ99315 1547 aa7.35□□□□□ -1.23
SLX5YDL013W PIM1P36775 1133 aa7.35□□□□□ -1.23
SLX5YDL013W SAP30P38429 201 aa7.35□□□□□ -1.23
SLX5YDL013W SIC1P38634 284 aa7.35□□□□□ -1.23
SLX5YDL013W SYH1Q02875 849 aaKnown RBP7.35□□□□□ -1.23
SLX5YDL013W STE20Q03497 939 aaKnown RBP7.35□□□□□ -1.23
SLX5YDL013W IMH1Q06704 911 aaKnown RBP7.35□□□□□ -1.23
SLX5YDL013W FRA1Q07825 749 aa7.35□□□□□ -1.23
SLX5YDL013W ALR1Q08269 859 aa7.35□□□□□ -1.23
SLX5YDL013W SUP35P05453 685 aaKnown RBP7.34□□□□□ -1.23
SLX5YDL013W FIG4P42837 879 aa7.34□□□□□ -1.23
SLX5YDL013W TAF1P46677 1066 aa7.34□□□□□ -1.23
SLX5YDL013W VID30P53076 958 aa7.34□□□□□ -1.23
SLX5YDL013W PDR10P51533 1564 aa7.34□□□□□ -1.23
SLX5YDL013W MMS1Q06211 1407 aa7.34□□□□□ -1.23
SLX5YDL013W GUT2P32191 649 aa7.34□□□□□ -1.23
SLX5YDL013W GDE1Q02979 1223 aa7.34□□□□□ -1.23
SLX5YDL013W PRP3Q03338 469 aaPredicted RBP7.34□□□□□ -1.23
SLX5YDL013W NOP56Q12460 504 aaKnown RBP RIP-Chip data7.34□□□□□ -1.23not detected
SLX5YDL013W DEP1P31385 405 aa7.33□□□□□ -1.24
SLX5YDL013W NPR3P38742 1146 aa7.33□□□□□ -1.24
SLX5YDL013W PAC1P39946 494 aaKnown RBP7.33□□□□□ -1.24
SLX5YDL013W BNI4P53858 892 aa7.33□□□□□ -1.24
SLX5YDL013W ALD3P54114 506 aa7.33□□□□□ -1.24
SLX5YDL013W YLR257WQ06146 321 aaKnown RBP7.33□□□□□ -1.24
SLX5YDL013W YPR084WQ06821 456 aa7.33□□□□□ -1.24
SLX5YDL013W VPS5Q92331 675 aa7.33□□□□□ -1.24
SLX5YDL013W YBT1P32386 1661 aa7.33□□□□□ -1.24
SLX5YDL013W YMR124WP39523 943 aaKnown RBP7.32□□□□□ -1.24
SLX5YDL013W HEM3P28789 327 aa7.32□□□□□ -1.24
SLX5YDL013W IQG1Q12280 1495 aa7.31□□□□□ -1.24
SLX5YDL013W PDC1P06169 563 aaKnown RBP7.31□□□□□ -1.24
SLX5YDL013W MPE1P35728 441 aaKnown RBP7.31□□□□□ -1.24
SLX5YDL013W NMD3P38861 518 aaKnown RBP7.31□□□□□ -1.24
SLX5YDL013W ATG3P40344 310 aa7.31□□□□□ -1.24
SLX5YDL013W TY4B-PA0A0B7P3V8 1104 aa7.3□□□□□ -1.24
SLX5YDL013W IME2P32581 645 aa7.3□□□□□ -1.24
SLX5YDL013W DOP1Q03921 1698 aa7.3□□□□□ -1.24
SLX5YDL013W RRN7P40992 514 aa7.3□□□□□ -1.24
SLX5YDL013W ELP4Q02884 456 aaKnown RBP7.3□□□□□ -1.24
SLX5YDL013W RRP15Q06511 250 aaPredicted RBP7.3□□□□□ -1.24
SLX5YDL013W YEL077CQ3E7X8 1277 aa7.3□□□□□ -1.24
SLX5YDL013W PRT1P06103 763 aaKnown RBP7.29□□□□□ -1.24
SLX5YDL013W SOH1P38633 127 aa7.29□□□□□ -1.24
SLX5YDL013W APL6P46682 809 aa7.29□□□□□ -1.24
SLX5YDL013W KXD1P53158 218 aa7.29□□□□□ -1.24
SLX5YDL013W GGA1Q06336 557 aa7.29□□□□□ -1.24
SLX5YDL013W YBL113CQ7M4S9 792 aa7.29□□□□□ -1.24
SLX5YDL013W PHO87P25360 923 aa7.28□□□□□ -1.24
SLX5YDL013W RPC82P32349 654 aa7.28□□□□□ -1.24
SLX5YDL013W HEL2Q05580 639 aaKnown RBP7.28□□□□□ -1.24
SLX5YDL013W YPR015CQ12531 247 aa7.28□□□□□ -1.24
SLX5YDL013W RPA135P22138 1203 aaKnown RBP7.28□□□□□ -1.24
SLX5YDL013W SPT23P35210 1082 aa7.28□□□□□ -1.24
SLX5YDL013W TPS3P38426 1054 aaKnown RBP7.28□□□□□ -1.24
SLX5YDL013W PTC2P39966 464 aaKnown RBP7.28□□□□□ -1.24
SLX5YDL013W UTP13Q05946 817 aaKnown RBP7.28□□□□□ -1.24
SLX5YDL013W YVC1Q12324 675 aa7.28□□□□□ -1.24
SLX5YDL013W CAT8P39113 1433 aa7.27□□□□□ -1.25
SLX5YDL013W PAT1P25644 796 aaKnown RBP7.27□□□□□ -1.25
SLX5YDL013W STM1P39015 273 aaKnown RBP7.27□□□□□ -1.25
SLX5YDL013W FKH1P40466 484 aa7.27□□□□□ -1.25
SLX5YDL013W HXT10P43581 546 aa7.27□□□□□ -1.25
SLX5YDL013W ACS2P52910 683 aaKnown RBP7.27□□□□□ -1.25
SLX5YDL013W CWC15Q03772 175 aaKnown RBP7.27□□□□□ -1.25
SLX5YDL013W BUD3P25558 1636 aa7.27□□□□□ -1.25
SLX5YDL013W HAP4P14064 554 aa7.26□□□□□ -1.25
SLX5YDL013W RPL5P26321 297 aaKnown RBP7.26□□□□□ -1.25
SLX5YDL013W OPY1P38271 328 aa7.26□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 43.7 ms