RNA–Protein interactions for RNA: YBR160W

CDC28, Transcript of Cyclin-dependent kinase (CDK) catalytic subunit, yeastyeast

Gene CDC28, Length 897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC28YBR160W OPT2Q06593 877 aa6.33□□□□□ -1.4
CDC28YBR160W RPP2BP02400 110 aaKnown RBP6.32□□□□□ -1.4
CDC28YBR160W MIP1P15801 1254 aa6.32□□□□□ -1.4
CDC28YBR160W LSC2P53312 427 aa6.32□□□□□ -1.4
CDC28YBR160W CBC2Q08920 208 aaKnown RBP RIP-Chip data6.32□□□□□ -1.4not detected
CDC28YBR160W RPA190P10964 1664 aaKnown RBP6.31□□□□□ -1.4
CDC28YBR160W AIM9P40053 627 aaKnown RBP6.3□□□□□ -1.4
CDC28YBR160W YOR093CQ12275 1648 aa6.29□□□□□ -1.4
CDC28YBR160W VTC4P47075 721 aa6.29□□□□□ -1.4
CDC28YBR160W DAT1P13483 248 aaKnown RBP6.28□□□□□ -1.4
CDC28YBR160W PHO87P25360 923 aa6.28□□□□□ -1.4
CDC28YBR160W CPS1P27614 576 aa6.28□□□□□ -1.4
CDC28YBR160W TGL4P36165 910 aa6.28□□□□□ -1.4
CDC28YBR160W TBS1P38114 1094 aa6.28□□□□□ -1.4
CDC28YBR160W DLD3P39976 496 aaKnown RBP6.28□□□□□ -1.4
CDC28YBR160W YLR346CQ06139 101 aa6.28□□□□□ -1.4
CDC28YBR160W YDL176WQ12027 708 aa6.28□□□□□ -1.4
CDC28YBR160W TY1A-BLQ12266 440 aa6.28□□□□□ -1.4
CDC28YBR160W TCB1Q12466 1186 aa6.28□□□□□ -1.4
CDC28YBR160W TSC13Q99190 310 aa6.28□□□□□ -1.4
CDC28YBR160W YSP2Q06681 1438 aa6.27□□□□□ -1.41
CDC28YBR160W SWI5P08153 709 aa6.27□□□□□ -1.41
CDC28YBR160W SSA1P10591 642 aaKnown RBP6.27□□□□□ -1.41
CDC28YBR160W YFL034WP43564 1073 aa6.27□□□□□ -1.41
CDC28YBR160W ACS2P52910 683 aaKnown RBP6.27□□□□□ -1.41
CDC28YBR160W YPQ2Q06328 317 aa6.27□□□□□ -1.41
CDC28YBR160W GAL2P13181 574 aa6.26□□□□□ -1.41
CDC28YBR160W SSN3P39073 555 aa6.26□□□□□ -1.41
CDC28YBR160W ACO2P39533 789 aa6.26□□□□□ -1.41
CDC28YBR160W KTR7P40504 517 aa6.26□□□□□ -1.41
CDC28YBR160W SUM1P46676 1062 aa6.26□□□□□ -1.41
CDC28YBR160W SCW11P53189 542 aa6.26□□□□□ -1.41
CDC28YBR160W RPS6AP0CX37 236 aaKnown RBP6.25□□□□□ -1.41
CDC28YBR160W RPS6BP0CX38 236 aaPredicted RBP6.25□□□□□ -1.41
CDC28YBR160W PDI1P17967 522 aaKnown RBP6.25□□□□□ -1.41
CDC28YBR160W SSA4P22202 642 aaKnown RBP6.25□□□□□ -1.41
CDC28YBR160W PUP1P25043 261 aa6.25□□□□□ -1.41
CDC28YBR160W GAR1P28007 205 aaKnown RBP6.25□□□□□ -1.41
CDC28YBR160W PAF1P38351 445 aa6.25□□□□□ -1.41
CDC28YBR160W MSN5P52918 1224 aa6.25□□□□□ -1.41
CDC28YBR160W UBP2Q01476 1272 aa6.25□□□□□ -1.41
CDC28YBR160W BUD21Q08492 214 aaPredicted RBP6.25□□□□□ -1.41
CDC28YBR160W LTE1P07866 1435 aa6.25□□□□□ -1.41
CDC28YBR160W CFT1Q06632 1357 aaKnown RBP6.24□□□□□ -1.41
CDC28YBR160W CDC19P00549 500 aaKnown RBP6.24□□□□□ -1.41
CDC28YBR160W DAL1P32375 460 aa6.24□□□□□ -1.41
CDC28YBR160W SLA1P32790 1244 aa6.24□□□□□ -1.41
CDC28YBR160W UTP7P40055 554 aaKnown RBP6.24□□□□□ -1.41
CDC28YBR160W TY1A-DR3Q12441 440 aa6.24□□□□□ -1.41
CDC28YBR160W SPO14P36126 1683 aa6.23□□□□□ -1.41
CDC28YBR160W NUP157P40064 1391 aaKnown RBP6.23□□□□□ -1.41
CDC28YBR160W RAV1P47104 1357 aa6.23□□□□□ -1.41
CDC28YBR160W HAP4P14064 554 aa6.23□□□□□ -1.41
CDC28YBR160W UBP1P25037 809 aa6.23□□□□□ -1.41
CDC28YBR160W NTH2P35172 780 aa6.23□□□□□ -1.41
CDC28YBR160W GEF1P37020 779 aa6.23□□□□□ -1.41
CDC28YBR160W ROM1P53046 1155 aa6.23□□□□□ -1.41
CDC28YBR160W SUB2Q07478 446 aaKnown RBP6.23□□□□□ -1.41
CDC28YBR160W GAS4Q08271 471 aa6.23□□□□□ -1.41
CDC28YBR160W CHC1P22137 1653 aaKnown RBP6.23□□□□□ -1.41
CDC28YBR160W MCM1P11746 286 aa6.22□□□□□ -1.41
CDC28YBR160W OSH7P38755 437 aa6.22□□□□□ -1.41
CDC28YBR160W PDS5Q04264 1277 aa6.22□□□□□ -1.41
CDC28YBR160W RPP0P05317 312 aaKnown RBP6.21□□□□□ -1.42
CDC28YBR160W CAB3P36076 571 aa6.21□□□□□ -1.42
CDC28YBR160W MET10P39692 1035 aa6.21□□□□□ -1.42
CDC28YBR160W NOB1Q08444 459 aaKnown RBP6.21□□□□□ -1.42
CDC28YBR160W RTC1Q08281 1341 aa6.21□□□□□ -1.42
CDC28YBR160W IME2P32581 645 aa6.2□□□□□ -1.42
CDC28YBR160W SHM1P37292 490 aaPredicted RBP6.2□□□□□ -1.42
CDC28YBR160W YIR007WP40566 764 aa6.2□□□□□ -1.42
CDC28YBR160W JJJ2P46997 583 aa6.2□□□□□ -1.42
CDC28YBR160W CAF120P53836 1060 aa6.2□□□□□ -1.42
CDC28YBR160W ECM23Q02710 187 aa6.2□□□□□ -1.42
CDC28YBR160W YPL062WQ02781 134 aa6.2□□□□□ -1.42
CDC28YBR160W IOC4Q04213 475 aa6.2□□□□□ -1.42
CDC28YBR160W BUD3P25558 1636 aa6.2□□□□□ -1.42
CDC28YBR160W CCP1P00431 361 aa6.19□□□□□ -1.42
CDC28YBR160W CYT1P07143 309 aa6.19□□□□□ -1.42
CDC28YBR160W SCT1P32784 759 aa6.19□□□□□ -1.42
CDC28YBR160W NAM8Q00539 523 aaKnown RBP6.19□□□□□ -1.42
CDC28YBR160W ROG3P43602 733 aa6.18□□□□□ -1.42
CDC28YBR160W YML020WQ03722 664 aa6.18□□□□□ -1.42
CDC28YBR160W TY1A-MR1Q04215 440 aa6.18□□□□□ -1.42
CDC28YBR160W YML083CQ04526 418 aa6.18□□□□□ -1.42
CDC28YBR160W RPS31P05759 152 aaKnown RBP6.17□□□□□ -1.42
CDC28YBR160W EBP2P36049 427 aaKnown RBP6.17□□□□□ -1.42
CDC28YBR160W UBP15P50101 1230 aa6.17□□□□□ -1.42
CDC28YBR160W RPL34AP87262 121 aaPredicted RBP6.17□□□□□ -1.42
CDC28YBR160W CDC45Q08032 650 aa6.17□□□□□ -1.42
CDC28YBR160W GBP2P25555 427 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
CDC28YBR160W AHP1P38013 176 aaKnown RBP6.16□□□□□ -1.42
CDC28YBR160W OPY1P38271 328 aa6.16□□□□□ -1.42
CDC28YBR160W VPS27P40343 622 aaKnown RBP6.16□□□□□ -1.42
CDC28YBR160W RPC31P17890 251 aa6.15□□□□□ -1.42
CDC28YBR160W CLC1P17891 233 aa6.15□□□□□ -1.42
CDC28YBR160W SUV3P32580 737 aa6.15□□□□□ -1.42
CDC28YBR160W NGR1P32831 672 aaKnown RBP6.15□□□□□ -1.42
CDC28YBR160W UBX7P38349 436 aa6.15□□□□□ -1.42
CDC28YBR160W RGA1P39083 1007 aa6.15□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms