RNA–Protein interactions for RNA: YBR073W

RDH54, Transcript of DNA-dependent ATPase, yeast

Gene RDH54, Length 2,877 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RDH54	YBR073W	TFB4	Q12004	338 aa		4.79	□□□□□ -1.64
RDH54	YBR073W	CEX1	Q12453	761 aa		4.79	□□□□□ -1.64
RDH54	YBR073W	RAD4	P14736	754 aa		4.78	□□□□□ -1.64
RDH54	YBR073W	URA1	P28272	314 aa	Predicted RBP	4.78	□□□□□ -1.64
RDH54	YBR073W	LEM3	P42838	414 aa		4.78	□□□□□ -1.64
RDH54	YBR073W	YNR029C	P53729	429 aa	Known RBP	4.78	□□□□□ -1.64
RDH54	YBR073W	BNI4	P53858	892 aa		4.78	□□□□□ -1.64
RDH54	YBR073W	CYB2	P00175	591 aa		4.78	□□□□□ -1.64
RDH54	YBR073W	HOM3	P10869	527 aa		4.78	□□□□□ -1.64
RDH54	YBR073W	GRX7	P38068	203 aa		4.78	□□□□□ -1.64
RDH54	YBR073W	TGL3	P40308	642 aa		4.78	□□□□□ -1.64
RDH54	YBR073W	YJL049W	P47048	450 aa		4.78	□□□□□ -1.64
RDH54	YBR073W	SRP1	Q02821	542 aa	Known RBP	4.78	□□□□□ -1.64
RDH54	YBR073W	PHM6	Q05637	104 aa		4.78	□□□□□ -1.64
RDH54	YBR073W	VIP1	Q06685	1146 aa	Known RBP	4.78	□□□□□ -1.64
RDH54	YBR073W	YPR084W	Q06821	456 aa		4.78	□□□□□ -1.64
RDH54	YBR073W	NOP14	Q99207	810 aa	Known RBP	4.78	□□□□□ -1.64
RDH54	YBR073W	SWR1	Q05471	1514 aa		4.78	□□□□□ -1.64
RDH54	YBR073W	RRF1	P38771	230 aa		4.77	□□□□□ -1.65
RDH54	YBR073W	PET123	P17558	318 aa		4.77	□□□□□ -1.65
RDH54	YBR073W	PIM1	P36775	1133 aa		4.77	□□□□□ -1.65
RDH54	YBR073W	PEA2	P40091	420 aa		4.77	□□□□□ -1.65
RDH54	YBR073W	UTP13	Q05946	817 aa	Known RBP	4.77	□□□□□ -1.65
RDH54	YBR073W	YOL036W	Q08206	761 aa		4.77	□□□□□ -1.65
RDH54	YBR073W	YGR161W-C	Q3E744	92 aa		4.77	□□□□□ -1.65
RDH54	YBR073W	TRM1	P15565	570 aa	Known RBP	4.76	□□□□□ -1.65
RDH54	YBR073W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
RDH54	YBR073W	RSC2	Q06488	889 aa		4.76	□□□□□ -1.65
RDH54	YBR073W	GRC3	Q07845	632 aa		4.76	□□□□□ -1.65
RDH54	YBR073W	SLX4	Q12098	748 aa		4.76	□□□□□ -1.65
RDH54	YBR073W	YOL087C	Q99247	1116 aa		4.76	□□□□□ -1.65
RDH54	YBR073W	KRR1	P25586	316 aa	Predicted RBP	4.76	□□□□□ -1.65
RDH54	YBR073W	DCW1	P36091	449 aa		4.76	□□□□□ -1.65
RDH54	YBR073W	NOP4	P37838	685 aa	Known RBP	4.76	□□□□□ -1.65
RDH54	YBR073W	ROM1	P53046	1155 aa		4.76	□□□□□ -1.65
RDH54	YBR073W	CHD1	P32657	1468 aa		4.76	□□□□□ -1.65
RDH54	YBR073W	ATP4	P05626	244 aa		4.75	□□□□□ -1.65
RDH54	YBR073W	RRN3	P36070	627 aa		4.75	□□□□□ -1.65
RDH54	YBR073W	MSH4	P40965	878 aa	Predicted RBP	4.75	□□□□□ -1.65
RDH54	YBR073W	RSC1	P53236	928 aa		4.75	□□□□□ -1.65
RDH54	YBR073W	ELA1	P53861	379 aa	Predicted RBP	4.75	□□□□□ -1.65
RDH54	YBR073W	SPO20	Q04359	397 aa		4.75	□□□□□ -1.65
RDH54	YBR073W	NAT1	P12945	854 aa	Known RBP	4.75	□□□□□ -1.65
RDH54	YBR073W	SLY41	P22215	453 aa		4.75	□□□□□ -1.65
RDH54	YBR073W	YKL222C	P35995	705 aa		4.75	□□□□□ -1.65
RDH54	YBR073W	UBX7	P38349	436 aa		4.75	□□□□□ -1.65
RDH54	YBR073W	MAM1	P40065	302 aa		4.75	□□□□□ -1.65
RDH54	YBR073W	GCD10	P41814	478 aa		4.75	□□□□□ -1.65
RDH54	YBR073W	ACF4	P47129	309 aa		4.75	□□□□□ -1.65
RDH54	YBR073W	YJR120W	P47157	116 aa		4.75	□□□□□ -1.65
RDH54	YBR073W	SPO71	Q03868	1245 aa		4.75	□□□□□ -1.65
RDH54	YBR073W	VTI1	Q04338	217 aa		4.75	□□□□□ -1.65
RDH54	YBR073W	YSH1	Q06224	779 aa	Predicted RBP	4.75	□□□□□ -1.65
RDH54	YBR073W	APL5	Q08951	932 aa	Known RBP	4.75	□□□□□ -1.65
RDH54	YBR073W	CIT1	P00890	479 aa		4.75	□□□□□ -1.65
RDH54	YBR073W	ISF1	P32488	338 aa		4.75	□□□□□ -1.65
RDH54	YBR073W	RRP8	P38961	392 aa	Known RBP	4.75	□□□□□ -1.65
RDH54	YBR073W	YPP1	P46951	817 aa		4.75	□□□□□ -1.65
RDH54	YBR073W	YNL115C	P53925	644 aa		4.75	□□□□□ -1.65
RDH54	YBR073W	AGE1	Q04412	482 aa		4.75	□□□□□ -1.65
RDH54	YBR073W	GPI13	Q07830	1017 aa		4.75	□□□□□ -1.65
RDH54	YBR073W	TUM1	Q08686	304 aa	Known RBP	4.75	□□□□□ -1.65
RDH54	YBR073W	TIM23	P32897	222 aa		4.74	□□□□□ -1.65
RDH54	YBR073W	SXM1	Q04175	944 aa	Known RBP	4.74	□□□□□ -1.65
RDH54	YBR073W	NUT2	Q06213	157 aa		4.74	□□□□□ -1.65
RDH54	YBR073W	ERF2	Q06551	359 aa		4.74	□□□□□ -1.65
RDH54	YBR073W	NOP58	Q12499	511 aa	Known RBP	4.74	□□□□□ -1.65
RDH54	YBR073W	PEX6	P33760	1030 aa		4.74	□□□□□ -1.65
RDH54	YBR073W	RXT2	P38255	430 aa		4.74	□□□□□ -1.65
RDH54	YBR073W	VPS41	P38959	992 aa		4.74	□□□□□ -1.65
RDH54	YBR073W	NUP82	P40368	713 aa		4.74	□□□□□ -1.65
RDH54	YBR073W	GPP1	P41277	250 aa	Known RBP	4.74	□□□□□ -1.65
RDH54	YBR073W	SPR28	Q04921	423 aa		4.74	□□□□□ -1.65
RDH54	YBR073W	SMD2	Q06217	110 aa	Known RBP	4.74	□□□□□ -1.65
RDH54	YBR073W	SPT7	P35177	1332 aa		4.73	□□□□□ -1.65
RDH54	YBR073W	CDC31	P06704	161 aa	Known RBP	4.73	□□□□□ -1.65
RDH54	YBR073W	AAD3	P25612	363 aa		4.73	□□□□□ -1.65
RDH54	YBR073W	STE5	P32917	917 aa		4.73	□□□□□ -1.65
RDH54	YBR073W	EXO84	P38261	753 aa		4.73	□□□□□ -1.65
RDH54	YBR073W	GTT3	P39996	337 aa		4.73	□□□□□ -1.65
RDH54	YBR073W	ESL1	P40456	1118 aa		4.73	□□□□□ -1.65
RDH54	YBR073W	KAR5	Q04746	504 aa		4.73	□□□□□ -1.65
RDH54	YBR073W	PLP2	Q12017	286 aa		4.73	□□□□□ -1.65
RDH54	YBR073W	RRP36	Q12481	300 aa	Predicted RBP	4.73	□□□□□ -1.65
RDH54	YBR073W	PPH3	P32345	308 aa		4.73	□□□□□ -1.65
RDH54	YBR073W	ACS2	P52910	683 aa	Known RBP	4.73	□□□□□ -1.65
RDH54	YBR073W	GPG1	P53130	126 aa		4.73	□□□□□ -1.65
RDH54	YBR073W	PRP43	P53131	767 aa	Known RBP	4.73	□□□□□ -1.65
RDH54	YBR073W	BNI5	P53890	448 aa	Known RBP	4.73	□□□□□ -1.65
RDH54	YBR073W	FRA1	Q07825	749 aa		4.73	□□□□□ -1.65
RDH54	YBR073W	HTA1	P04911	132 aa	Known RBP	4.72	□□□□□ -1.65
RDH54	YBR073W	HTA2	P04912	132 aa		4.72	□□□□□ -1.65
RDH54	YBR073W	MET6	P05694	767 aa	Known RBP	4.72	□□□□□ -1.65
RDH54	YBR073W	FUN12	P39730	1002 aa	Known RBP	4.72	□□□□□ -1.65
RDH54	YBR073W	YEL023C	P39992	682 aa		4.72	□□□□□ -1.65
RDH54	YBR073W	RTT105	P40063	208 aa		4.72	□□□□□ -1.65
RDH54	YBR073W	KTR7	P40504	517 aa		4.72	□□□□□ -1.65
RDH54	YBR073W	HUL5	P53119	910 aa		4.72	□□□□□ -1.65
RDH54	YBR073W	UTP14	Q04500	899 aa	Known RBP	4.72	□□□□□ -1.65
RDH54	YBR073W	YDR286C	Q05530	114 aa		4.72	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 75.1 ms