RNA–Protein interactions for RNA: YAL047C

SPC72, Transcript of Component of the cytoplasmic Tub4p (gamma-tubulin) complex, yeast

Gene SPC72, Length 1,869 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPC72	YAL047C	RRN6	P32786	894 aa		4.35	□□□□□ -1.71
SPC72	YAL047C	YBR197C	P38306	217 aa		4.35	□□□□□ -1.71
SPC72	YAL047C	SSA1	P10591	642 aa	Known RBP	4.34	□□□□□ -1.71
SPC72	YAL047C	DYS1	P38791	387 aa		4.34	□□□□□ -1.71
SPC72	YAL047C	CUS1	Q02554	436 aa	Predicted RBP	4.34	□□□□□ -1.71
SPC72	YAL047C	PNP1	Q05788	311 aa		4.34	□□□□□ -1.71
SPC72	YAL047C	HEH2	Q03281	663 aa		4.33	□□□□□ -1.72
SPC72	YAL047C	CWC15	Q03772	175 aa	Known RBP	4.33	□□□□□ -1.72
SPC72	YAL047C	GPM1	P00950	247 aa	Known RBP	4.32	□□□□□ -1.72
SPC72	YAL047C	VMA3	P25515	160 aa		4.32	□□□□□ -1.72
SPC72	YAL047C	LDH1	P38139	375 aa		4.32	□□□□□ -1.72
SPC72	YAL047C	TY1A-DR2	Q03964	440 aa	Known RBP	4.32	□□□□□ -1.72
SPC72	YAL047C	FUR4	P05316	633 aa	Known RBP	4.32	□□□□□ -1.72
SPC72	YAL047C	APM2	P38700	605 aa		4.32	□□□□□ -1.72
SPC72	YAL047C	SKP1	P52286	194 aa		4.32	□□□□□ -1.72
SPC72	YAL047C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.32	□□□□□ -1.72	not detected
SPC72	YAL047C	YNR014W	P53719	212 aa		4.32	□□□□□ -1.72
SPC72	YAL047C	YFL066C	P43538	392 aa		4.31	□□□□□ -1.72
SPC72	YAL047C	TAF7	Q05021	590 aa		4.31	□□□□□ -1.72
SPC72	YAL047C	PDC5	P16467	563 aa	Known RBP	4.3	□□□□□ -1.72
SPC72	YAL047C	RPC31	P17890	251 aa		4.3	□□□□□ -1.72
SPC72	YAL047C	KNS1	P32350	737 aa	Predicted RBP	4.3	□□□□□ -1.72
SPC72	YAL047C	TPS3	P38426	1054 aa	Known RBP	4.3	□□□□□ -1.72
SPC72	YAL047C	MSC7	P38694	644 aa		4.3	□□□□□ -1.72
SPC72	YAL047C	MET1	P36150	593 aa		4.3	□□□□□ -1.72
SPC72	YAL047C	FIR1	P40020	876 aa		4.3	□□□□□ -1.72
SPC72	YAL047C	CCT8	P47079	568 aa	Known RBP	4.3	□□□□□ -1.72
SPC72	YAL047C	YOR296W	Q08748	1289 aa		4.3	□□□□□ -1.72
SPC72	YAL047C	GIP1	P38229	639 aa		4.29	□□□□□ -1.72
SPC72	YAL047C	YBR287W	P38355	427 aa		4.29	□□□□□ -1.72
SPC72	YAL047C	ISW1	P38144	1129 aa		4.28	□□□□□ -1.72
SPC72	YAL047C	BOI2	P39969	1040 aa		4.28	□□□□□ -1.72
SPC72	YAL047C	SBE2	P42223	864 aa	Known RBP	4.28	□□□□□ -1.72
SPC72	YAL047C	SUT1	P53032	299 aa	Known RBP	4.28	□□□□□ -1.72
SPC72	YAL047C	KAR5	Q04746	504 aa		4.28	□□□□□ -1.72
SPC72	YAL047C	BSD2	P38356	321 aa		4.28	□□□□□ -1.72
SPC72	YAL047C	YNR040W	P53736	256 aa		4.28	□□□□□ -1.72
SPC72	YAL047C	YPR053C	Q6Q5F3	151 aa		4.28	□□□□□ -1.72
SPC72	YAL047C	GEF1	P37020	779 aa		4.27	□□□□□ -1.73
SPC72	YAL047C	PRK1	P40494	810 aa		4.27	□□□□□ -1.73
SPC72	YAL047C	HXT8	P40886	569 aa		4.27	□□□□□ -1.73
SPC72	YAL047C	SBP1	P10080	294 aa	Known RBP	4.26	□□□□□ -1.73
SPC72	YAL047C	TDA6	Q06466	467 aa		4.26	□□□□□ -1.73
SPC72	YAL047C	MSN1	P22148	382 aa		4.26	□□□□□ -1.73
SPC72	YAL047C	BOL3	P39724	118 aa		4.26	□□□□□ -1.73
SPC72	YAL047C	ITC1	P53125	1264 aa		4.26	□□□□□ -1.73
SPC72	YAL047C	RSC2	Q06488	889 aa		4.26	□□□□□ -1.73
SPC72	YAL047C	IDI1	P15496	288 aa		4.25	□□□□□ -1.73
SPC72	YAL047C	CDC3	P32457	520 aa	Known RBP	4.25	□□□□□ -1.73
SPC72	YAL047C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
SPC72	YAL047C	ALG14	P38242	237 aa		4.25	□□□□□ -1.73
SPC72	YAL047C	GLO3	P38682	493 aa	Known RBP	4.25	□□□□□ -1.73
SPC72	YAL047C	LSO1	Q3E827	93 aa		4.25	□□□□□ -1.73
SPC72	YAL047C	RPB10	P22139	70 aa		4.24	□□□□□ -1.73
SPC72	YAL047C	BOI1	P38041	980 aa	Known RBP	4.24	□□□□□ -1.73
SPC72	YAL047C	YER156C	P40093	338 aa	Known RBP	4.24	□□□□□ -1.73
SPC72	YAL047C	YMR187C	Q03236	431 aa		4.24	□□□□□ -1.73
SPC72	YAL047C	SMC1	P32908	1225 aa		4.24	□□□□□ -1.73
SPC72	YAL047C	PGM2	P37012	569 aa	Known RBP	4.24	□□□□□ -1.73
SPC72	YAL047C	RAD55	P38953	406 aa		4.24	□□□□□ -1.73
SPC72	YAL047C	APC11	Q12157	165 aa		4.24	□□□□□ -1.73
SPC72	YAL047C	NHA1	Q99271	985 aa		4.24	□□□□□ -1.73
SPC72	YAL047C	AIM46	P38885	310 aa		4.23	□□□□□ -1.73
SPC72	YAL047C	SKN7	P38889	622 aa		4.23	□□□□□ -1.73
SPC72	YAL047C	MCX1	P38323	520 aa	Predicted RBP	4.22	□□□□□ -1.73
SPC72	YAL047C	YIL165C	P40446	119 aa		4.22	□□□□□ -1.73
SPC72	YAL047C	QDR1	P40475	563 aa		4.22	□□□□□ -1.73
SPC72	YAL047C	YJL181W	P46987	611 aa		4.22	□□□□□ -1.73
SPC72	YAL047C	PPT1	P53043	513 aa		4.22	□□□□□ -1.73
SPC72	YAL047C	NAR1	P23503	491 aa	Known RBP	4.21	□□□□□ -1.74
SPC72	YAL047C	NTA1	P40354	457 aa		4.21	□□□□□ -1.74
SPC72	YAL047C	GIS4	Q04233	774 aa		4.21	□□□□□ -1.74
SPC72	YAL047C	RGD2	P43556	714 aa		4.2	□□□□□ -1.74
SPC72	YAL047C	ATG1	P53104	897 aa		4.2	□□□□□ -1.74
SPC72	YAL047C	UFD2	P54860	961 aa		4.2	□□□□□ -1.74
SPC72	YAL047C	EMG1	Q06287	252 aa	Known RBP	4.2	□□□□□ -1.74
SPC72	YAL047C	IRS4	P36115	615 aa	Known RBP	4.2	□□□□□ -1.74
SPC72	YAL047C	GRS1	P38088	690 aa	Known RBP	4.2	□□□□□ -1.74
SPC72	YAL047C	HAT1	Q12341	374 aa		4.2	□□□□□ -1.74
SPC72	YAL047C	TIF6	Q12522	245 aa	Known RBP	4.2	□□□□□ -1.74
SPC72	YAL047C	MRP10	O75012	95 aa		4.19	□□□□□ -1.74
SPC72	YAL047C	KTR2	P33550	425 aa		4.19	□□□□□ -1.74
SPC72	YAL047C	TAT1	P38085	619 aa		4.19	□□□□□ -1.74
SPC72	YAL047C	PSY2	P40164	858 aa		4.19	□□□□□ -1.74
SPC72	YAL047C	SLP1	Q12232	587 aa		4.18	□□□□□ -1.74
SPC72	YAL047C	YDR215C	Q12240	137 aa		4.18	□□□□□ -1.74
SPC72	YAL047C	PRY1	P47032	299 aa		4.18	□□□□□ -1.74
SPC72	YAL047C	ACF4	P47129	309 aa		4.18	□□□□□ -1.74
SPC72	YAL047C	SOK2	P53438	785 aa	Predicted RBP	4.18	□□□□□ -1.74
SPC72	YAL047C	YBL113C	Q7M4S9	792 aa		4.18	□□□□□ -1.74
SPC72	YAL047C	RRM3	P38766	723 aa		4.17	□□□□□ -1.74
SPC72	YAL047C	INP51	P40559	946 aa	Known RBP	4.17	□□□□□ -1.74
SPC72	YAL047C	FUS1	P11710	512 aa		4.16	□□□□□ -1.74
SPC72	YAL047C	ECM2	P38241	364 aa	Known RBP	4.16	□□□□□ -1.74
SPC72	YAL047C	ERP5	P38819	212 aa		4.16	□□□□□ -1.74
SPC72	YAL047C	SLN1	P39928	1220 aa	Predicted RBP	4.16	□□□□□ -1.74
SPC72	YAL047C	GIP2	P40036	548 aa		4.16	□□□□□ -1.74
SPC72	YAL047C	TED1	P40533	473 aa		4.16	□□□□□ -1.74
SPC72	YAL047C	YCK2	P23292	546 aa	Known RBP	4.15	□□□□□ -1.74
SPC72	YAL047C	TRS120	Q04183	1289 aa		4.15	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 15 ms