RNA–Protein interactions for RNA: YAL015C

NTG1, Transcript of DNA N-glycosylase and apurinic/apyrimidinic (AP) lyase, yeast

Gene NTG1, Length 1,200 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NTG1	YAL015C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	7.8	□□□□□ -1.16	not detected
NTG1	YAL015C	MRPS35	P53292	345 aa		7.8	□□□□□ -1.16
NTG1	YAL015C	MSB4	Q12317	492 aa		7.8	□□□□□ -1.16
NTG1	YAL015C	YRF1-2	P40105	1681 aa		7.79	□□□□□ -1.16
NTG1	YAL015C	KCC4	P25389	1037 aa		7.79	□□□□□ -1.16
NTG1	YAL015C	RDS1	P25611	832 aa		7.79	□□□□□ -1.16
NTG1	YAL015C	RAM2	P29703	316 aa		7.79	□□□□□ -1.16
NTG1	YAL015C	ELG1	Q12050	791 aa		7.79	□□□□□ -1.16
NTG1	YAL015C	YPL150W	Q12152	901 aa		7.79	□□□□□ -1.16
NTG1	YAL015C	GPA1	P08539	472 aa		7.78	□□□□□ -1.16
NTG1	YAL015C	RNA1	P11745	407 aa	Known RBP	7.78	□□□□□ -1.16
NTG1	YAL015C	RIX1	P38883	763 aa	Predicted RBP	7.78	□□□□□ -1.16
NTG1	YAL015C	GTT3	P39996	337 aa		7.78	□□□□□ -1.16
NTG1	YAL015C	CTH1	P47976	325 aa		7.78	□□□□□ -1.16
NTG1	YAL015C	PRP31	P49704	494 aa	Predicted RBP	7.78	□□□□□ -1.16
NTG1	YAL015C	RNT1	Q02555	471 aa		7.78	□□□□□ -1.16
NTG1	YAL015C	COG4	Q06096	861 aa		7.78	□□□□□ -1.16
NTG1	YAL015C	PSK2	Q08217	1101 aa		7.78	□□□□□ -1.16
NTG1	YAL015C	BNI1	P41832	1953 aa		7.77	□□□□□ -1.17
NTG1	YAL015C	RRM3	P38766	723 aa		7.77	□□□□□ -1.17
NTG1	YAL015C	DMA1	P38823	416 aa		7.77	□□□□□ -1.17
NTG1	YAL015C	ENT3	P47160	408 aa		7.77	□□□□□ -1.17
NTG1	YAL015C	MLC1	P53141	149 aa		7.77	□□□□□ -1.17
NTG1	YAL015C	YGL082W	P53155	381 aa		7.77	□□□□□ -1.17
NTG1	YAL015C	MRS2	Q01926	470 aa		7.77	□□□□□ -1.17
NTG1	YAL015C	RRP5	Q05022	1729 aa	Known RBP	7.76	□□□□□ -1.17
NTG1	YAL015C	KTR1	P27810	393 aa	Known RBP	7.76	□□□□□ -1.17
NTG1	YAL015C	SPC110	P32380	944 aa		7.76	□□□□□ -1.17
NTG1	YAL015C	NUP133	P36161	1157 aa		7.76	□□□□□ -1.17
NTG1	YAL015C	MAL33	P38157	468 aa		7.76	□□□□□ -1.17
NTG1	YAL015C	SSF1	P38789	453 aa	Predicted RBP	7.76	□□□□□ -1.17
NTG1	YAL015C	YER130C	P39959	443 aa		7.76	□□□□□ -1.17
NTG1	YAL015C	CST6	P40535	587 aa		7.76	□□□□□ -1.17
NTG1	YAL015C	TFG2	P41896	400 aa	Predicted RBP	7.76	□□□□□ -1.17
NTG1	YAL015C	YPT11	P48559	417 aa		7.76	□□□□□ -1.17
NTG1	YAL015C	YGL242C	P53066	181 aa		7.76	□□□□□ -1.17
NTG1	YAL015C	ARP5	P53946	755 aa		7.76	□□□□□ -1.17
NTG1	YAL015C	ALO1	P54783	526 aa	Known RBP	7.76	□□□□□ -1.17
NTG1	YAL015C	DNM1	P54861	757 aa		7.76	□□□□□ -1.17
NTG1	YAL015C	MAK10	Q02197	733 aa		7.76	□□□□□ -1.17
NTG1	YAL015C	SML1	Q04964	104 aa		7.76	□□□□□ -1.17
NTG1	YAL015C	SIS1	P25294	352 aa	Known RBP	7.75	□□□□□ -1.17
NTG1	YAL015C	MED8	P38304	223 aa		7.75	□□□□□ -1.17
NTG1	YAL015C	YHL017W	P38745	532 aa		7.75	□□□□□ -1.17
NTG1	YAL015C	ECM1	P39715	212 aa		7.75	□□□□□ -1.17
NTG1	YAL015C	FYV10	P40492	516 aa		7.75	□□□□□ -1.17
NTG1	YAL015C	ZDS2	P54786	942 aa		7.75	□□□□□ -1.17
NTG1	YAL015C	YKL068W-A	Q3E826	78 aa		7.75	□□□□□ -1.17
NTG1	YAL015C	VMA1	P17255	1071 aa	Known RBP	7.74	□□□□□ -1.17
NTG1	YAL015C	MSH1	P25846	959 aa		7.74	□□□□□ -1.17
NTG1	YAL015C	GSY2	P27472	705 aa		7.74	□□□□□ -1.17
NTG1	YAL015C	SRP40	P32583	406 aa	Predicted RBP	7.74	□□□□□ -1.17
NTG1	YAL015C	VPS41	P38959	992 aa		7.74	□□□□□ -1.17
NTG1	YAL015C	UBP12	P39538	1254 aa		7.74	□□□□□ -1.17
NTG1	YAL015C	VID28	P40547	921 aa		7.74	□□□□□ -1.17
NTG1	YAL015C	DSN1	P40568	576 aa		7.74	□□□□□ -1.17
NTG1	YAL015C	YGL140C	P53120	1219 aa		7.74	□□□□□ -1.17
NTG1	YAL015C	WAR1	Q03631	944 aa		7.74	□□□□□ -1.17
NTG1	YAL015C	SRC1	Q03707	834 aa		7.74	□□□□□ -1.17
NTG1	YAL015C	VMS1	Q04311	632 aa	Known RBP	7.74	□□□□□ -1.17
NTG1	YAL015C	TLG2	Q08144	397 aa		7.74	□□□□□ -1.17
NTG1	YAL015C	CTI6	Q08923	506 aa		7.74	□□□□□ -1.17
NTG1	YAL015C	SWI1	P09547	1314 aa		7.74	□□□□□ -1.17
NTG1	YAL015C	KTR3	P38130	404 aa	Predicted RBP	7.73	□□□□□ -1.17
NTG1	YAL015C	STM1	P39015	273 aa	Known RBP	7.73	□□□□□ -1.17
NTG1	YAL015C	YJR008W	P47085	338 aa		7.73	□□□□□ -1.17
NTG1	YAL015C	GIN4	Q12263	1142 aa		7.73	□□□□□ -1.17
NTG1	YAL015C	YOL087C	Q99247	1116 aa		7.73	□□□□□ -1.17
NTG1	YAL015C	LPD1	P09624	499 aa	Known RBP	7.72	□□□□□ -1.17
NTG1	YAL015C	PET123	P17558	318 aa		7.72	□□□□□ -1.17
NTG1	YAL015C	STE11	P23561	717 aa		7.72	□□□□□ -1.17
NTG1	YAL015C	RFC5	P38251	354 aa		7.72	□□□□□ -1.17
NTG1	YAL015C	RTT107	P38850	1070 aa		7.72	□□□□□ -1.17
NTG1	YAL015C	OSW7	P43611	510 aa		7.72	□□□□□ -1.17
NTG1	YAL015C	SPP1	Q03012	353 aa		7.72	□□□□□ -1.17
NTG1	YAL015C	YCG1	Q06680	1035 aa		7.72	□□□□□ -1.17
NTG1	YAL015C	RFT1	P38206	574 aa	Predicted RBP	7.71	□□□□□ -1.18
NTG1	YAL015C	NOC2	P39744	710 aa	Known RBP	7.71	□□□□□ -1.18
NTG1	YAL015C	MVP1	P40959	511 aa	Known RBP	7.71	□□□□□ -1.18
NTG1	YAL015C	MSH4	P40965	878 aa	Predicted RBP	7.71	□□□□□ -1.18
NTG1	YAL015C	PIB2	P53191	635 aa		7.71	□□□□□ -1.18
NTG1	YAL015C	YMR102C	Q03177	834 aa		7.71	□□□□□ -1.18
NTG1	YAL015C	PGA3	Q12746	312 aa	Known RBP	7.71	□□□□□ -1.18
NTG1	YAL015C	MATALPHA2	P0CY08	210 aa		7.7	□□□□□ -1.18
NTG1	YAL015C	HMLALPHA2	P0CY09	210 aa		7.7	□□□□□ -1.18
NTG1	YAL015C	YKT6	P36015	200 aa	Known RBP	7.7	□□□□□ -1.18
NTG1	YAL015C	CIC1	P38779	376 aa	Known RBP	7.7	□□□□□ -1.18
NTG1	YAL015C	NUG1	P40010	520 aa	Known RBP	7.7	□□□□□ -1.18
NTG1	YAL015C	YKE2	P52553	114 aa		7.7	□□□□□ -1.18
NTG1	YAL015C	ALE1	Q08548	619 aa		7.7	□□□□□ -1.18
NTG1	YAL015C	SAM3	Q08986	587 aa		7.7	□□□□□ -1.18
NTG1	YAL015C	APL4	Q12028	832 aa		7.7	□□□□□ -1.18
NTG1	YAL015C	PSH1	Q12161	406 aa		7.7	□□□□□ -1.18
NTG1	YAL015C	FBP26	P32604	452 aa		7.69	□□□□□ -1.18
NTG1	YAL015C	PCH2	P38126	564 aa		7.69	□□□□□ -1.18
NTG1	YAL015C	GDT1	P38301	280 aa	Predicted RBP	7.69	□□□□□ -1.18
NTG1	YAL015C	TIF11	P38912	153 aa	Known RBP	7.69	□□□□□ -1.18
NTG1	YAL015C	BUD6	P41697	788 aa		7.69	□□□□□ -1.18
NTG1	YAL015C	STR2	P47164	639 aa		7.69	□□□□□ -1.18
NTG1	YAL015C	VPS75	P53853	264 aa		7.69	□□□□□ -1.18

Retrieved 100 of 5,963 RNA–protein pairs in 58.4 ms