RNA–Protein interactions for RNA: ENST00000642115.1

LINC02228-204, Transcript of long intergenic non-protein coding RNA 2228, humanhuman

BASIC

Gene LINC02228, Length 2,962 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02228-204ENST00000642115 SCAF11Q99590 1463 aaKnown RBP19.76■□□□□ 0.75
LINC02228-204ENST00000642115 TRAK1Q9UPV9 953 aa19.75■□□□□ 0.75
LINC02228-204ENST00000642115 EIF2AK4Q9P2K8 1649 aaKnown RBP19.75■□□□□ 0.75
LINC02228-204ENST00000642115 ZNF692Q9BU19 519 aaPredicted RBP19.74■□□□□ 0.75
LINC02228-204ENST00000642115 MYO5CQ9NQX4 1742 aa19.73■□□□□ 0.75
LINC02228-204ENST00000642115 ADGRF5Q8IZF2 1346 aa19.73■□□□□ 0.75
LINC02228-204ENST00000642115 EFCAB2Q5VUJ9 269 aa19.73■□□□□ 0.75
LINC02228-204ENST00000642115 ARID3AQ99856 593 aa19.73■□□□□ 0.75
LINC02228-204ENST00000642115 ZSCAN30Q86W11 494 aa19.73■□□□□ 0.75
LINC02228-204ENST00000642115 TSR2Q969E8 191 aaKnown RBP19.72■□□□□ 0.75
LINC02228-204ENST00000642115 RUNDC1Q96C34 613 aa19.72■□□□□ 0.75
LINC02228-204ENST00000642115 CDC42BPBQ9Y5S2 1711 aa19.72■□□□□ 0.75
LINC02228-204ENST00000642115 SPAG9O60271 1321 aaKnown RBP19.72■□□□□ 0.75
LINC02228-204ENST00000642115 KIF3BO15066 747 aa19.72■□□□□ 0.75
LINC02228-204ENST00000642115 U2AF1L5P0DN76 240 aaPredicted RBP19.72■□□□□ 0.75
LINC02228-204ENST00000642115 MTHFSP49914 203 aa19.72■□□□□ 0.75
LINC02228-204ENST00000642115 U2AF1Q01081 240 aaKnown RBP eCLIP19.72■□□□□ 0.75
LINC02228-204ENST00000642115 C22orf23Q9BZE7 217 aa19.71■□□□□ 0.75
LINC02228-204ENST00000642115 FGD1P98174 961 aa19.71■□□□□ 0.75
LINC02228-204ENST00000642115 R3HCC1Q9Y3T6 440 aaKnown RBP19.71■□□□□ 0.75
LINC02228-204ENST00000642115 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.69■□□□□ 0.74
LINC02228-204ENST00000642115 ITPRIPQ8IWB1 547 aa19.69■□□□□ 0.74
LINC02228-204ENST00000642115 TNPO1Q92973 898 aaKnown RBP19.68■□□□□ 0.74
LINC02228-204ENST00000642115 CCDC173Q0VFZ6 552 aa19.68■□□□□ 0.74
LINC02228-204ENST00000642115 FOXD4L1Q9NU39 408 aa19.68■□□□□ 0.74
LINC02228-204ENST00000642115 TMEM132EQ6IEE7 984 aa19.68■□□□□ 0.74
LINC02228-204ENST00000642115 PPP1R9BQ96SB3 815 aa19.68■□□□□ 0.74
LINC02228-204ENST00000642115 SMC4Q9NTJ3 1288 aa19.68■□□□□ 0.74
LINC02228-204ENST00000642115 LAMC1P11047 1609 aa19.67■□□□□ 0.74
LINC02228-204ENST00000642115 MSNP26038 577 aaKnown RBP19.67■□□□□ 0.74
LINC02228-204ENST00000642115 MAP7D2Q96T17 732 aa19.67■□□□□ 0.74
LINC02228-204ENST00000642115 ZHX1Q9UKY1 873 aaPredicted RBP19.67■□□□□ 0.74
LINC02228-204ENST00000642115 U2SURPO15042 1029 aaKnown RBP19.67■□□□□ 0.74
LINC02228-204ENST00000642115 SAFB2Q14151 953 aaKnown RBP eCLIP19.66■□□□□ 0.74
LINC02228-204ENST00000642115 NUTM2DQ5VT03 806 aaPredicted RBP19.66■□□□□ 0.74
LINC02228-204ENST00000642115 PRDM10Q9NQV6 1147 aa19.66■□□□□ 0.74
LINC02228-204ENST00000642115 TTC37Q6PGP7 1564 aa19.66■□□□□ 0.74
LINC02228-204ENST00000642115 RTEL1-TNFRSF6BF6WH68 1400 aa19.66■□□□□ 0.74
LINC02228-204ENST00000642115 TERF1P54274 439 aa19.66■□□□□ 0.74
LINC02228-204ENST00000642115 HSCBQ8IWL3 235 aa19.66■□□□□ 0.74
LINC02228-204ENST00000642115 DZIP1LQ8IYY4 767 aaKnown RBP19.66■□□□□ 0.74
LINC02228-204ENST00000642115 UNC13BO14795 1591 aa19.66■□□□□ 0.74
LINC02228-204ENST00000642115 TRAPPC8Q9Y2L5 1435 aa19.66■□□□□ 0.74
LINC02228-204ENST00000642115 NASPP49321 788 aaPredicted RBP19.65■□□□□ 0.74
LINC02228-204ENST00000642115 MVPQ14764 893 aaKnown RBP19.65■□□□□ 0.74
LINC02228-204ENST00000642115 ZKSCAN2Q63HK3 967 aa19.65■□□□□ 0.74
LINC02228-204ENST00000642115 ABCC2Q92887 1545 aa19.65■□□□□ 0.74
LINC02228-204ENST00000642115 PREX2Q70Z35 1606 aa19.65■□□□□ 0.74
LINC02228-204ENST00000642115 DDIT3P35638 169 aa19.65■□□□□ 0.74
LINC02228-204ENST00000642115 SMAP1Q8IYB5 467 aaPredicted RBP19.65■□□□□ 0.74
LINC02228-204ENST00000642115 NGEFQ8N5V2 710 aa19.65■□□□□ 0.74
LINC02228-204ENST00000642115 NSD3Q9BZ95 1437 aa19.64■□□□□ 0.74
LINC02228-204ENST00000642115 SYNMO15061 1565 aa19.64■□□□□ 0.74
LINC02228-204ENST00000642115 NPC1L1Q9UHC9 1359 aa19.64■□□□□ 0.74
LINC02228-204ENST00000642115 DUOX2Q9NRD8 1548 aa19.64■□□□□ 0.73
LINC02228-204ENST00000642115 CFAP53Q96M91 514 aa19.64■□□□□ 0.73
LINC02228-204ENST00000642115 IQGAP3Q86VI3 1631 aa19.63■□□□□ 0.73
LINC02228-204ENST00000642115 NINLQ9Y2I6 1382 aa19.63■□□□□ 0.73
LINC02228-204ENST00000642115 CLASP1Q7Z460 1538 aa19.62■□□□□ 0.73
LINC02228-204ENST00000642115 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.62■□□□□ 0.73
LINC02228-204ENST00000642115 CHD1O14646 1710 aa19.62■□□□□ 0.73
LINC02228-204ENST00000642115 EXOSC9Q06265 439 aaKnown RBP19.62■□□□□ 0.73
LINC02228-204ENST00000642115 MAST1Q9Y2H9 1570 aa19.62■□□□□ 0.73
LINC02228-204ENST00000642115 ATP10AO60312 1499 aa19.62■□□□□ 0.73
LINC02228-204ENST00000642115 UQCRHLA0A096LP55 91 aa19.62■□□□□ 0.73
LINC02228-204ENST00000642115 UQCRHP07919 91 aa19.62■□□□□ 0.73
LINC02228-204ENST00000642115 ERCC6L2Q5T890 1561 aa19.61■□□□□ 0.73
LINC02228-204ENST00000642115 MADDQ8WXG6 1647 aa19.6■□□□□ 0.73
LINC02228-204ENST00000642115 WDR63Q8IWG1 891 aa19.6■□□□□ 0.73
LINC02228-204ENST00000642115 LNPKQ9C0E8 428 aa19.6■□□□□ 0.73
LINC02228-204ENST00000642115 POLR3AO14802 1390 aaPredicted RBP19.6■□□□□ 0.73
LINC02228-204ENST00000642115 SKOR2Q2VWA4 1001 aaPredicted RBP19.6■□□□□ 0.73
LINC02228-204ENST00000642115 GBP4Q96PP9 640 aa19.6■□□□□ 0.73
LINC02228-204ENST00000642115 ERVK-7P63135 1459 aa19.6■□□□□ 0.73
LINC02228-204ENST00000642115 XPCQ01831 940 aaPredicted RBP19.59■□□□□ 0.73
LINC02228-204ENST00000642115 ZMYM3Q14202 1370 aa19.59■□□□□ 0.73
LINC02228-204ENST00000642115 ANP32BQ92688 251 aaKnown RBP19.59■□□□□ 0.73
LINC02228-204ENST00000642115 TRIM27P14373 513 aa19.58■□□□□ 0.73
LINC02228-204ENST00000642115 RNF17Q9BXT8 1623 aaKnown RBP19.58■□□□□ 0.72
LINC02228-204ENST00000642115 HSP90AB1P08238 724 aaKnown RBP19.57■□□□□ 0.72
LINC02228-204ENST00000642115 SSH1Q8WYL5 1049 aa19.57■□□□□ 0.72
LINC02228-204ENST00000642115 NCOA3Q9Y6Q9 1424 aa19.57■□□□□ 0.72
LINC02228-204ENST00000642115 RAB3GAP1Q15042 981 aa19.57■□□□□ 0.72
LINC02228-204ENST00000642115 KANK1Q14678 1352 aa19.57■□□□□ 0.72
LINC02228-204ENST00000642115 NOB1Q9ULX3 412 aaKnown RBP19.56■□□□□ 0.72
LINC02228-204ENST00000642115 SCAPERQ9BY12 1400 aa19.56■□□□□ 0.72
LINC02228-204ENST00000642115 STAC3Q96MF2 364 aa19.56■□□□□ 0.72
LINC02228-204ENST00000642115 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.55■□□□□ 0.72
LINC02228-204ENST00000642115 IQGAP1P46940 1657 aa19.55■□□□□ 0.72
LINC02228-204ENST00000642115 UGGT1Q9NYU2 1555 aa19.55■□□□□ 0.72
LINC02228-204ENST00000642115 SLC24A1O60721 1099 aa19.54■□□□□ 0.72
LINC02228-204ENST00000642115 SMC5Q8IY18 1101 aa19.54■□□□□ 0.72
LINC02228-204ENST00000642115 TMEM57Q8N5G2 664 aa19.54■□□□□ 0.72
LINC02228-204ENST00000642115 CABP2Q9NPB3 220 aa19.53■□□□□ 0.72
LINC02228-204ENST00000642115 NOL7Q9UMY1 257 aaKnown RBP19.53■□□□□ 0.72
LINC02228-204ENST00000642115 ZNF500O60304 480 aaPredicted RBP19.52■□□□□ 0.72
LINC02228-204ENST00000642115 CIZ1Q9ULV3 898 aaPredicted RBP19.52■□□□□ 0.72
LINC02228-204ENST00000642115 KDM5AP29375 1690 aaKnown RBP19.52■□□□□ 0.72
LINC02228-204ENST00000642115 MYOM1P52179 1685 aa19.52■□□□□ 0.72
LINC02228-204ENST00000642115 GGNBP2Q9H3C7 697 aa19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms