RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 C1orf167Q5SNV9 1468 aa24.74■■□□□ 1.55
PHGDH-234ENST00000642041 BCL9LQ86UU0 1499 aa24.73■■□□□ 1.55
PHGDH-234ENST00000642041 GJD4Q96KN9 370 aaPredicted RBP24.73■■□□□ 1.55
PHGDH-234ENST00000642041 NRXN3Q9Y4C0 1643 aa24.71■■□□□ 1.55
PHGDH-234ENST00000642041 METP08581 1390 aa24.7■■□□□ 1.55
PHGDH-234ENST00000642041 DEFB132Q7Z7B7 95 aa24.7■■□□□ 1.54
PHGDH-234ENST00000642041 COL22A1Q8NFW1 1626 aaPredicted RBP24.68■■□□□ 1.54
PHGDH-234ENST00000642041 NALCNQ8IZF0 1738 aa24.68■■□□□ 1.54
PHGDH-234ENST00000642041 ORAI2Q96SN7 254 aa24.67■■□□□ 1.54
PHGDH-234ENST00000642041 MPHOSPH9Q99550 1183 aa24.67■■□□□ 1.54
PHGDH-234ENST00000642041 E9PCH4 1651 aa24.66■■□□□ 1.54
PHGDH-234ENST00000642041 MYOM2P54296 1465 aa24.65■■□□□ 1.54
PHGDH-234ENST00000642041 IQGAP3Q86VI3 1631 aa24.65■■□□□ 1.54
PHGDH-234ENST00000642041 SF3B2Q13435 895 aaKnown RBP24.65■■□□□ 1.54
PHGDH-234ENST00000642041 NUP155O75694 1391 aa24.65■■□□□ 1.54
PHGDH-234ENST00000642041 MARF1Q9Y4F3 1742 aaKnown RBP24.6■■□□□ 1.53
PHGDH-234ENST00000642041 UNC5CLQ8IV45 518 aa24.58■■□□□ 1.53
PHGDH-234ENST00000642041 SLC4A1APQ9BWU0 796 aaKnown RBP24.58■■□□□ 1.53
PHGDH-234ENST00000642041 RALGAPBQ86X10 1494 aa24.58■■□□□ 1.52
PHGDH-234ENST00000642041 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.57■■□□□ 1.52
PHGDH-234ENST00000642041 TONSLQ96HA7 1378 aa24.56■■□□□ 1.52
PHGDH-234ENST00000642041 GLI3P10071 1580 aa24.56■■□□□ 1.52
PHGDH-234ENST00000642041 PSDA5PKW4 1024 aaPredicted RBP24.56■■□□□ 1.52
PHGDH-234ENST00000642041 ZNF316A6NFI3 1004 aaPredicted RBP24.56■■□□□ 1.52
PHGDH-234ENST00000642041 SPHKAPQ2M3C7 1700 aa24.55■■□□□ 1.52
PHGDH-234ENST00000642041 NPHP3Q7Z494 1330 aa24.55■■□□□ 1.52
PHGDH-234ENST00000642041 BRWD3Q6RI45 1802 aa24.54■■□□□ 1.52
PHGDH-234ENST00000642041 ZNF326Q5BKZ1 582 aaKnown RBP24.54■■□□□ 1.52
PHGDH-234ENST00000642041 SLIT2O94813 1529 aa24.51■■□□□ 1.51
PHGDH-234ENST00000642041 SEPT12Q8IYM1 358 aa24.51■■□□□ 1.51
PHGDH-234ENST00000642041 ROBO2Q9HCK4 1378 aa24.49■■□□□ 1.51
PHGDH-234ENST00000642041 PXDNQ92626 1479 aa24.49■■□□□ 1.51
PHGDH-234ENST00000642041 BAG6P46379 1132 aa24.48■■□□□ 1.51
PHGDH-234ENST00000642041 NEUROD1Q13562 356 aa24.48■■□□□ 1.51
PHGDH-234ENST00000642041 ESCO1Q5FWF5 840 aa24.47■■□□□ 1.51
PHGDH-234ENST00000642041 ANKRD30BQ9BXX2 1392 aa24.46■■□□□ 1.51
PHGDH-234ENST00000642041 ONECUT3O60422 494 aaPredicted RBP24.46■■□□□ 1.51
PHGDH-234ENST00000642041 KRT27Q7Z3Y8 459 aa24.45■■□□□ 1.5
PHGDH-234ENST00000642041 FOXO3O43524 673 aa24.44■■□□□ 1.5
PHGDH-234ENST00000642041 SIN3AQ96ST3 1273 aa24.44■■□□□ 1.5
PHGDH-234ENST00000642041 YY1P25490 414 aa24.43■■□□□ 1.5
PHGDH-234ENST00000642041 XPCQ01831 940 aaPredicted RBP24.43■■□□□ 1.5
PHGDH-234ENST00000642041 PRAG1Q86YV5 1406 aa24.43■■□□□ 1.5
PHGDH-234ENST00000642041 LRPPRCP42704 1394 aaKnown RBP24.42■■□□□ 1.5
PHGDH-234ENST00000642041 NEXMIFQ5QGS0 1516 aa24.42■■□□□ 1.5
PHGDH-234ENST00000642041 VPS72Q15906 364 aa24.42■■□□□ 1.5
PHGDH-234ENST00000642041 R3HDM1Q15032 1099 aaKnown RBP24.37■■□□□ 1.49
PHGDH-234ENST00000642041 SPATA31A3Q5VYP0 1347 aa24.35■■□□□ 1.49
PHGDH-234ENST00000642041 CDC42BPGQ6DT37 1551 aa24.35■■□□□ 1.49
PHGDH-234ENST00000642041 EN1Q05925 392 aaPredicted RBP24.35■■□□□ 1.49
PHGDH-234ENST00000642041 USP32Q8NFA0 1604 aa24.35■■□□□ 1.49
PHGDH-234ENST00000642041 CCDC9Q9Y3X0 531 aaKnown RBP24.34■■□□□ 1.49
PHGDH-234ENST00000642041 VGFO15240 615 aaPredicted RBP24.33■■□□□ 1.49
PHGDH-234ENST00000642041 CCDC144AA2RUR9 1427 aa24.3■■□□□ 1.48
PHGDH-234ENST00000642041 STAC3Q96MF2 364 aa24.29■■□□□ 1.48
PHGDH-234ENST00000642041 NWD2Q9ULI1 1742 aa24.29■■□□□ 1.48
PHGDH-234ENST00000642041 HAP1P54257 671 aaPredicted RBP24.28■■□□□ 1.48
PHGDH-234ENST00000642041 CLTCL1P53675 1640 aa24.28■■□□□ 1.48
PHGDH-234ENST00000642041 A0A0G2JS52 829 aa24.27■■□□□ 1.48
PHGDH-234ENST00000642041 MYT1Q01538 1121 aa24.27■■□□□ 1.48
PHGDH-234ENST00000642041 DIEXFQ68CQ4 756 aaKnown RBP24.27■■□□□ 1.48
PHGDH-234ENST00000642041 DISP2A7MBM2 1401 aa24.27■■□□□ 1.48
PHGDH-234ENST00000642041 RGPD1P0DJD0 1748 aa24.26■■□□□ 1.47
PHGDH-234ENST00000642041 NUTM2FA1L443 756 aa24.25■■□□□ 1.47
PHGDH-234ENST00000642041 KRT28Q7Z3Y7 464 aa24.25■■□□□ 1.47
PHGDH-234ENST00000642041 PLCH1Q4KWH8 1693 aa24.24■■□□□ 1.47
PHGDH-234ENST00000642041 KIF1BO60333 1816 aa24.24■■□□□ 1.47
PHGDH-234ENST00000642041 FAM98CQ17RN3 349 aaKnown RBP24.23■■□□□ 1.47
PHGDH-234ENST00000642041 CABLES1Q8TDN4 633 aa24.22■■□□□ 1.47
PHGDH-234ENST00000642041 EZH2Q15910 746 aaKnown RBP24.21■■□□□ 1.47
PHGDH-234ENST00000642041 RPGRIP1LQ68CZ1 1315 aa24.2■■□□□ 1.46
PHGDH-234ENST00000642041 TNS3Q68CZ2 1445 aa24.19■■□□□ 1.46
PHGDH-234ENST00000642041 KIF1AQ12756 1690 aa24.19■■□□□ 1.46
PHGDH-234ENST00000642041 FAM83GA6ND36 823 aa24.19■■□□□ 1.46
PHGDH-234ENST00000642041 L3MBTL2Q969R5 705 aa24.19■■□□□ 1.46
PHGDH-234ENST00000642041 PSME1Q06323 249 aa24.18■■□□□ 1.46
PHGDH-234ENST00000642041 FAM182BQ5T319 152 aa24.17■■□□□ 1.46
PHGDH-234ENST00000642041 CAMKK2Q96RR4 588 aa24.17■■□□□ 1.46
PHGDH-234ENST00000642041 DCAF8L1A6NGE4 600 aa24.16■■□□□ 1.46
PHGDH-234ENST00000642041 WAPLQ7Z5K2 1190 aa24.16■■□□□ 1.46
PHGDH-234ENST00000642041 TNS1Q9HBL0 1735 aaKnown RBP24.15■■□□□ 1.46
PHGDH-234ENST00000642041 TECPR2O15040 1411 aa24.13■■□□□ 1.45
PHGDH-234ENST00000642041 PLEKHG5O94827 1062 aa24.13■■□□□ 1.45
PHGDH-234ENST00000642041 SBNO1A3KN83 1393 aa24.13■■□□□ 1.45
PHGDH-234ENST00000642041 FMN2Q9NZ56 1722 aa24.13■■□□□ 1.45
PHGDH-234ENST00000642041 ARHGEF10O15013 1369 aa24.12■■□□□ 1.45
PHGDH-234ENST00000642041 PARD3Q8TEW0 1356 aa24.12■■□□□ 1.45
PHGDH-234ENST00000642041 NRAPQ86VF7 1730 aa24.12■■□□□ 1.45
PHGDH-234ENST00000642041 ABCA3Q99758 1704 aa24.11■■□□□ 1.45
PHGDH-234ENST00000642041 BTG4Q9NY30 223 aa24.11■■□□□ 1.45
PHGDH-234ENST00000642041 PHF8Q9UPP1 1060 aa24.11■■□□□ 1.45
PHGDH-234ENST00000642041 LMOD2Q6P5Q4 547 aa24.1■■□□□ 1.45
PHGDH-234ENST00000642041 STK26Q9P289 416 aa24.1■■□□□ 1.45
PHGDH-234ENST00000642041 ADGRB2O60241 1585 aa24.09■■□□□ 1.45
PHGDH-234ENST00000642041 EIF4G2P78344 907 aaKnown RBP eCLIP24.09■■□□□ 1.457e-14■■■■■ 63.8
PHGDH-234ENST00000642041 SPATA31E1Q6ZUB1 1445 aa24.09■■□□□ 1.45
PHGDH-234ENST00000642041 SPATA31A5Q5VU36 1347 aa24.09■■□□□ 1.45
PHGDH-234ENST00000642041 SPATA31A7Q8IWB4 1347 aa24.09■■□□□ 1.45
PHGDH-234ENST00000642041 IFFO2Q5TF58 517 aa24.08■■□□□ 1.45
PHGDH-234ENST00000642041 PPP1R1BQ9UD71 204 aaPredicted RBP24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms