RNA–Protein interactions for RNA: ENST00000641991.1

CASC19-272, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,360 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-272ENST00000641991 ROBO2Q9HCK4 1378 aa15.86■□□□□ 0.13
CASC19-272ENST00000641991 KDM4FA0A1W2PPD8 638 aa15.86■□□□□ 0.13
CASC19-272ENST00000641991 MINK1Q8N4C8 1332 aaPredicted RBP15.85■□□□□ 0.13
CASC19-272ENST00000641991 PIK3R4Q99570 1358 aa15.85■□□□□ 0.13
CASC19-272ENST00000641991 PTCH1Q13635 1447 aa15.85■□□□□ 0.13
CASC19-272ENST00000641991 XRN1Q8IZH2 1706 aaKnown RBP15.84■□□□□ 0.13
CASC19-272ENST00000641991 WAPLQ7Z5K2 1190 aa15.84■□□□□ 0.13
CASC19-272ENST00000641991 KTN1Q86UP2 1357 aaKnown RBP15.83■□□□□ 0.12
CASC19-272ENST00000641991 NPHP4O75161 1426 aaPredicted RBP15.82■□□□□ 0.12
CASC19-272ENST00000641991 ATAD2Q6PL18 1390 aa15.81■□□□□ 0.12
CASC19-272ENST00000641991 PARD3Q8TEW0 1356 aa15.81■□□□□ 0.12
CASC19-272ENST00000641991 NINLQ9Y2I6 1382 aa15.81■□□□□ 0.12
CASC19-272ENST00000641991 ADGRB2O60241 1585 aa15.81■□□□□ 0.12
CASC19-272ENST00000641991 CABP2Q9NPB3 220 aa15.8■□□□□ 0.12
CASC19-272ENST00000641991 NPC1L1Q9UHC9 1359 aa15.8■□□□□ 0.12
CASC19-272ENST00000641991 AMOTL2Q9Y2J4 779 aa15.79■□□□□ 0.12
CASC19-272ENST00000641991 SRPK2P78362 688 aaKnown RBP15.78■□□□□ 0.12
CASC19-272ENST00000641991 AMER1Q5JTC6 1135 aaPredicted RBP15.78■□□□□ 0.12
CASC19-272ENST00000641991 RALBP1Q15311 655 aa15.77■□□□□ 0.12
CASC19-272ENST00000641991 CDK19Q9BWU1 502 aa15.77■□□□□ 0.12
CASC19-272ENST00000641991 CARD14Q9BXL6 1004 aa15.77■□□□□ 0.12
CASC19-272ENST00000641991 SLC12A5Q9H2X9 1139 aa15.77■□□□□ 0.12
CASC19-272ENST00000641991 ANKRD36BQ8N2N9 1353 aa15.77■□□□□ 0.11
CASC19-272ENST00000641991 KNSTRNQ9Y448 316 aa15.76■□□□□ 0.11
CASC19-272ENST00000641991 LMTK3Q96Q04 1460 aa15.76■□□□□ 0.11
CASC19-272ENST00000641991 NCKAP5LQ9HCH0 1330 aa15.76■□□□□ 0.11
CASC19-272ENST00000641991 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.76■□□□□ 0.11
CASC19-272ENST00000641991 WASLO00401 505 aaPredicted RBP15.75■□□□□ 0.11
CASC19-272ENST00000641991 CCDC184Q52MB2 194 aa15.75■□□□□ 0.11
CASC19-272ENST00000641991 TMC1Q8TDI8 760 aa15.75■□□□□ 0.11
CASC19-272ENST00000641991 MYBBP1AQ9BQG0 1328 aaKnown RBP15.75■□□□□ 0.11
CASC19-272ENST00000641991 KCNA6P17658 529 aa15.75■□□□□ 0.11
CASC19-272ENST00000641991 USP32Q8NFA0 1604 aa15.74■□□□□ 0.11
CASC19-272ENST00000641991 CD163L1Q9NR16 1453 aa15.74■□□□□ 0.11
CASC19-272ENST00000641991 NSD3Q9BZ95 1437 aa15.74■□□□□ 0.11
CASC19-272ENST00000641991 CNGB1Q14028 1251 aaPredicted RBP15.74■□□□□ 0.11
CASC19-272ENST00000641991 CC2D1BQ5T0F9 858 aaKnown RBP15.74■□□□□ 0.11
CASC19-272ENST00000641991 YTHDC1Q96MU7 727 aaKnown RBP15.74■□□□□ 0.11
CASC19-272ENST00000641991 NWD1Q149M9 1564 aa15.73■□□□□ 0.11
CASC19-272ENST00000641991 A0A1W2PP64 1363 aa15.73■□□□□ 0.11
CASC19-272ENST00000641991 ATP7BP35670 1465 aa15.73■□□□□ 0.11
CASC19-272ENST00000641991 MRS2Q9HD23 443 aa15.72■□□□□ 0.11
CASC19-272ENST00000641991 CHD2O14647 1828 aaKnown RBP15.71■□□□□ 0.11
CASC19-272ENST00000641991 BRD4O60885 1362 aaPredicted RBP15.71■□□□□ 0.11
CASC19-272ENST00000641991 PRR36Q9H6K5 1346 aa15.7■□□□□ 0.1
CASC19-272ENST00000641991 HSPA2P54652 639 aa15.69■□□□□ 0.1
CASC19-272ENST00000641991 NLRP13Q86W25 1043 aa15.69■□□□□ 0.1
CASC19-272ENST00000641991 TERF2IPQ9NYB0 399 aa15.69■□□□□ 0.1
CASC19-272ENST00000641991 PPIP5K1Q6PFW1 1433 aa15.68■□□□□ 0.1
CASC19-272ENST00000641991 NUDT16Q96DE0 195 aaKnown RBP15.68■□□□□ 0.1
CASC19-272ENST00000641991 CABP1Q9NZU7 370 aa15.68■□□□□ 0.1
CASC19-272ENST00000641991 TOPAZ1Q8N9V7 1692 aa15.68■□□□□ 0.1
CASC19-272ENST00000641991 NSD2O96028 1365 aa15.67■□□□□ 0.1
CASC19-272ENST00000641991 CDC42BPGQ6DT37 1551 aa15.67■□□□□ 0.1
CASC19-272ENST00000641991 CPSF1Q10570 1443 aaKnown RBP15.67■□□□□ 0.1
CASC19-272ENST00000641991 CGNL1Q0VF96 1302 aa15.67■□□□□ 0.1
CASC19-272ENST00000641991 NKTRP30414 1462 aaKnown RBP15.66■□□□□ 0.1
CASC19-272ENST00000641991 CCDC61Q9Y6R9 512 aa15.66■□□□□ 0.1
CASC19-272ENST00000641991 HDGFL2Q7Z4V5 671 aaPredicted RBP15.65■□□□□ 0.1
CASC19-272ENST00000641991 ANKARQ7Z5J8 1434 aa15.65■□□□□ 0.1
CASC19-272ENST00000641991 ADGRL3Q9HAR2 1447 aa15.65■□□□□ 0.1
CASC19-272ENST00000641991 PPP2R1AP30153 589 aa15.64■□□□□ 0.09
CASC19-272ENST00000641991 NALCNQ8IZF0 1738 aa15.64■□□□□ 0.09
CASC19-272ENST00000641991 EDC4Q6P2E9 1401 aaKnown RBP15.62■□□□□ 0.09
CASC19-272ENST00000641991 FMN2Q9NZ56 1722 aa15.62■□□□□ 0.09
CASC19-272ENST00000641991 PLEKHG3A1L390 1219 aa15.62■□□□□ 0.09
CASC19-272ENST00000641991 CENPBP07199 599 aaPredicted RBP15.62■□□□□ 0.09
CASC19-272ENST00000641991 PNISRQ8TF01 805 aaKnown RBP15.62■□□□□ 0.09
CASC19-272ENST00000641991 STRCQ7RTU9 1775 aa15.61■□□□□ 0.09
CASC19-272ENST00000641991 MON2Q7Z3U7 1717 aa15.59■□□□□ 0.09
CASC19-272ENST00000641991 MORC1Q86VD1 984 aa15.59■□□□□ 0.09
CASC19-272ENST00000641991 FAM9BQ8IZU0 186 aa15.59■□□□□ 0.09
CASC19-272ENST00000641991 AKAP12Q02952 1782 aa15.59■□□□□ 0.09
CASC19-272ENST00000641991 POLR3AO14802 1390 aaPredicted RBP15.58■□□□□ 0.08
CASC19-272ENST00000641991 FYB1O15117 783 aa15.58■□□□□ 0.08
CASC19-272ENST00000641991 NRKQ7Z2Y5 1582 aa15.58■□□□□ 0.08
CASC19-272ENST00000641991 ITSN1Q15811 1721 aa15.57■□□□□ 0.08
CASC19-272ENST00000641991 NUTM2FA1L443 756 aa15.57■□□□□ 0.08
CASC19-272ENST00000641991 RBM33Q96EV2 1170 aaKnown RBP15.57■□□□□ 0.08
CASC19-272ENST00000641991 ANKRD26Q9UPS8 1709 aa15.56■□□□□ 0.08
CASC19-272ENST00000641991 USP6P35125 1406 aa15.56■□□□□ 0.08
CASC19-272ENST00000641991 ACEP12821 1306 aa15.56■□□□□ 0.08
CASC19-272ENST00000641991 ZNF692Q9BU19 519 aaPredicted RBP15.56■□□□□ 0.08
CASC19-272ENST00000641991 STRCP1A6NGW2 1772 aa15.56■□□□□ 0.08
CASC19-272ENST00000641991 SSH2Q76I76 1423 aa15.56■□□□□ 0.08
CASC19-272ENST00000641991 INSRP06213 1382 aa15.55■□□□□ 0.08
CASC19-272ENST00000641991 PROSER2Q86WR7 435 aaPredicted RBP15.55■□□□□ 0.08
CASC19-272ENST00000641991 GGNBP2Q9H3C7 697 aa15.55■□□□□ 0.08
CASC19-272ENST00000641991 NCOA3Q9Y6Q9 1424 aa15.55■□□□□ 0.08
CASC19-272ENST00000641991 KIF20BQ96Q89 1820 aa15.55■□□□□ 0.08
CASC19-272ENST00000641991 TMEM94Q12767 1356 aa15.54■□□□□ 0.08
CASC19-272ENST00000641991 HNRNPUQ00839 825 aaKnown RBP eCLIP15.53■□□□□ 0.08
CASC19-272ENST00000641991 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.53■□□□□ 0.082e-7■■■□□ 16
CASC19-272ENST00000641991 DCCP43146 1447 aa15.52■□□□□ 0.08
CASC19-272ENST00000641991 TTC21BQ7Z4L5 1316 aa15.52■□□□□ 0.07
CASC19-272ENST00000641991 TNNT2P45379 298 aaPredicted RBP15.51■□□□□ 0.07
CASC19-272ENST00000641991 C14orf37Q86TY3 774 aa15.51■□□□□ 0.07
CASC19-272ENST00000641991 NME9Q86XW9 330 aa15.51■□□□□ 0.07
CASC19-272ENST00000641991 BLMP54132 1417 aaPredicted RBP15.51■□□□□ 0.07
CASC19-272ENST00000641991 SCAF1Q9H7N4 1312 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms