RNA–Protein interactions for RNA: ENST00000641314.1

PHGDH-214, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-214ENST00000641314 SIRT1Q96EB6 747 aa24.3■■□□□ 1.48
PHGDH-214ENST00000641314 PIK3R4Q99570 1358 aa24.3■■□□□ 1.48
PHGDH-214ENST00000641314 XRN1Q8IZH2 1706 aaKnown RBP24.29■■□□□ 1.48
PHGDH-214ENST00000641314 PTCH1Q13635 1447 aa24.26■■□□□ 1.47
PHGDH-214ENST00000641314 CHD2O14647 1828 aaKnown RBP24.26■■□□□ 1.47
PHGDH-214ENST00000641314 MYOM1P52179 1685 aa24.25■■□□□ 1.47
PHGDH-214ENST00000641314 KCNA6P17658 529 aa24.24■■□□□ 1.47
PHGDH-214ENST00000641314 SRPK2P78362 688 aaKnown RBP24.24■■□□□ 1.47
PHGDH-214ENST00000641314 CABP2Q9NPB3 220 aa24.23■■□□□ 1.47
PHGDH-214ENST00000641314 ANP32CO43423 234 aa24.22■■□□□ 1.47
PHGDH-214ENST00000641314 PANK3Q9H999 370 aa24.21■■□□□ 1.47
PHGDH-214ENST00000641314 CDK19Q9BWU1 502 aa24.2■■□□□ 1.47
PHGDH-214ENST00000641314 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.2■■□□□ 1.47
PHGDH-214ENST00000641314 STRCQ7RTU9 1775 aa24.2■■□□□ 1.46
PHGDH-214ENST00000641314 TMC1Q8TDI8 760 aa24.19■■□□□ 1.46
PHGDH-214ENST00000641314 PUS7Q96PZ0 661 aaKnown RBP24.19■■□□□ 1.46
PHGDH-214ENST00000641314 ADGRB2O60241 1585 aa24.16■■□□□ 1.46
PHGDH-214ENST00000641314 WASLO00401 505 aaPredicted RBP24.16■■□□□ 1.46
PHGDH-214ENST00000641314 ATAD2Q6PL18 1390 aa24.16■■□□□ 1.46
PHGDH-214ENST00000641314 NWD1Q149M9 1564 aa24.16■■□□□ 1.46
PHGDH-214ENST00000641314 CNGB1Q14028 1251 aaPredicted RBP24.15■■□□□ 1.46
PHGDH-214ENST00000641314 SLC12A5Q9H2X9 1139 aa24.14■■□□□ 1.45
PHGDH-214ENST00000641314 PER1O15534 1290 aaPredicted RBP24.09■■□□□ 1.45
PHGDH-214ENST00000641314 RBM33Q96EV2 1170 aaKnown RBP24.09■■□□□ 1.45
PHGDH-214ENST00000641314 NINLQ9Y2I6 1382 aa24.09■■□□□ 1.45
PHGDH-214ENST00000641314 PRKRIP1Q9H875 184 aaPredicted RBP24.08■■□□□ 1.44
PHGDH-214ENST00000641314 KNSTRNQ9Y448 316 aa24.08■■□□□ 1.44
PHGDH-214ENST00000641314 NKTRP30414 1462 aaKnown RBP24.07■■□□□ 1.44
PHGDH-214ENST00000641314 NALCNQ8IZF0 1738 aa24.07■■□□□ 1.44
PHGDH-214ENST00000641314 PROSER2Q86WR7 435 aaPredicted RBP24.06■■□□□ 1.44
PHGDH-214ENST00000641314 NUDT16Q96DE0 195 aaKnown RBP24.06■■□□□ 1.44
PHGDH-214ENST00000641314 STRCP1A6NGW2 1772 aa24.06■■□□□ 1.44
PHGDH-214ENST00000641314 CABP1Q9NZU7 370 aa24.05■■□□□ 1.44
PHGDH-214ENST00000641314 ATP7BP35670 1465 aa24.04■■□□□ 1.44
PHGDH-214ENST00000641314 ANKRD36BQ8N2N9 1353 aa24.04■■□□□ 1.44
PHGDH-214ENST00000641314 NUTM2FA1L443 756 aa24.04■■□□□ 1.44
PHGDH-214ENST00000641314 C14orf37Q86TY3 774 aa24.04■■□□□ 1.44
PHGDH-214ENST00000641314 CARD14Q9BXL6 1004 aa24.03■■□□□ 1.44
PHGDH-214ENST00000641314 PPIP5K1Q6PFW1 1433 aa24.03■■□□□ 1.44
PHGDH-214ENST00000641314 PRR36Q9H6K5 1346 aa24.03■■□□□ 1.44
PHGDH-214ENST00000641314 KTN1Q86UP2 1357 aaKnown RBP24.03■■□□□ 1.44
PHGDH-214ENST00000641314 CC2D1BQ5T0F9 858 aaKnown RBP24.03■■□□□ 1.44
PHGDH-214ENST00000641314 ADGRL3Q9HAR2 1447 aa24.03■■□□□ 1.44
PHGDH-214ENST00000641314 TERF2IPQ9NYB0 399 aa24.02■■□□□ 1.44
PHGDH-214ENST00000641314 NSD3Q9BZ95 1437 aa24.02■■□□□ 1.44
PHGDH-214ENST00000641314 A0A1W2PP64 1363 aa24.01■■□□□ 1.43
PHGDH-214ENST00000641314 CDC42BPGQ6DT37 1551 aa24■■□□□ 1.43
PHGDH-214ENST00000641314 CCDC61Q9Y6R9 512 aa24■■□□□ 1.43
PHGDH-214ENST00000641314 FMN2Q9NZ56 1722 aa24■■□□□ 1.43
PHGDH-214ENST00000641314 CD163L1Q9NR16 1453 aa23.99■■□□□ 1.43
PHGDH-214ENST00000641314 HDGFL2Q7Z4V5 671 aaPredicted RBP23.99■■□□□ 1.43
PHGDH-214ENST00000641314 USP32Q8NFA0 1604 aa23.99■■□□□ 1.43
PHGDH-214ENST00000641314 TOPAZ1Q8N9V7 1692 aa23.99■■□□□ 1.43
PHGDH-214ENST00000641314 DMRT2Q9Y5R5 561 aa23.99■■□□□ 1.43
PHGDH-214ENST00000641314 CCER2I3L3R5 266 aa23.98■■□□□ 1.43
PHGDH-214ENST00000641314 AMER1Q5JTC6 1135 aaPredicted RBP23.98■■□□□ 1.43
PHGDH-214ENST00000641314 RALBP1Q15311 655 aa23.96■■□□□ 1.43
PHGDH-214ENST00000641314 AEBP2Q6ZN18 517 aaPredicted RBP23.96■■□□□ 1.43
PHGDH-214ENST00000641314 ZNF335Q9H4Z2 1342 aaPredicted RBP23.96■■□□□ 1.43
PHGDH-214ENST00000641314 TMEM94Q12767 1356 aa23.96■■□□□ 1.43
PHGDH-214ENST00000641314 ITSN1Q15811 1721 aa23.96■■□□□ 1.43
PHGDH-214ENST00000641314 RGPD8O14715 1765 aaPredicted RBP23.96■■□□□ 1.43
PHGDH-214ENST00000641314 ANKARQ7Z5J8 1434 aa23.95■■□□□ 1.42
PHGDH-214ENST00000641314 PARD3Q8TEW0 1356 aa23.95■■□□□ 1.42
PHGDH-214ENST00000641314 NPC1L1Q9UHC9 1359 aa23.93■■□□□ 1.42
PHGDH-214ENST00000641314 CGNL1Q0VF96 1302 aa23.92■■□□□ 1.42
PHGDH-214ENST00000641314 CPSF1Q10570 1443 aaKnown RBP23.91■■□□□ 1.42
PHGDH-214ENST00000641314 AKAP12Q02952 1782 aa23.91■■□□□ 1.42
PHGDH-214ENST00000641314 MYBBP1AQ9BQG0 1328 aaKnown RBP23.9■■□□□ 1.42
PHGDH-214ENST00000641314 PLEKHG3A1L390 1219 aa23.9■■□□□ 1.42
PHGDH-214ENST00000641314 PMFBP1Q8TBY8 1022 aa23.89■■□□□ 1.41
PHGDH-214ENST00000641314 C19orf44Q9H6X5 657 aa23.89■■□□□ 1.41
PHGDH-214ENST00000641314 NCOA3Q9Y6Q9 1424 aa23.89■■□□□ 1.41
PHGDH-214ENST00000641314 ACEP12821 1306 aa23.88■■□□□ 1.41
PHGDH-214ENST00000641314 MON2Q7Z3U7 1717 aa23.88■■□□□ 1.41
PHGDH-214ENST00000641314 CCDC184Q52MB2 194 aa23.87■■□□□ 1.41
PHGDH-214ENST00000641314 LRRC7Q96NW7 1537 aa23.87■■□□□ 1.41
PHGDH-214ENST00000641314 XIRP1Q702N8 1843 aaKnown RBP23.86■■□□□ 1.41
PHGDH-214ENST00000641314 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.86■■□□□ 1.41
PHGDH-214ENST00000641314 ZNF692Q9BU19 519 aaPredicted RBP23.86■■□□□ 1.41
PHGDH-214ENST00000641314 MRS2Q9HD23 443 aa23.86■■□□□ 1.41
PHGDH-214ENST00000641314 EDC4Q6P2E9 1401 aaKnown RBP23.85■■□□□ 1.41
PHGDH-214ENST00000641314 NGDNQ8NEJ9 315 aaKnown RBP23.85■■□□□ 1.41
PHGDH-214ENST00000641314 NSD2O96028 1365 aa23.85■■□□□ 1.41
PHGDH-214ENST00000641314 KIF20BQ96Q89 1820 aa23.84■■□□□ 1.41
PHGDH-214ENST00000641314 ATF3P18847 181 aa23.84■■□□□ 1.41
PHGDH-214ENST00000641314 MSH6P52701 1360 aa23.83■■□□□ 1.41
PHGDH-214ENST00000641314 MORC1Q86VD1 984 aa23.83■■□□□ 1.41
PHGDH-214ENST00000641314 DCCP43146 1447 aa23.82■■□□□ 1.4
PHGDH-214ENST00000641314 POLR3AO14802 1390 aaPredicted RBP23.82■■□□□ 1.4
PHGDH-214ENST00000641314 ESCO1Q5FWF5 840 aa23.82■■□□□ 1.4
PHGDH-214ENST00000641314 NLRP13Q86W25 1043 aa23.82■■□□□ 1.4
PHGDH-214ENST00000641314 YTHDC1Q96MU7 727 aaKnown RBP23.82■■□□□ 1.4
PHGDH-214ENST00000641314 GGNBP2Q9H3C7 697 aa23.82■■□□□ 1.4
PHGDH-214ENST00000641314 PHF8Q9UPP1 1060 aa23.82■■□□□ 1.4
PHGDH-214ENST00000641314 FYB1O15117 783 aa23.81■■□□□ 1.4
PHGDH-214ENST00000641314 USP6P35125 1406 aa23.81■■□□□ 1.4
PHGDH-214ENST00000641314 ANKRD26Q9UPS8 1709 aa23.8■■□□□ 1.4
PHGDH-214ENST00000641314 NRKQ7Z2Y5 1582 aa23.8■■□□□ 1.4
PHGDH-214ENST00000641314 PPP2R1AP30153 589 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms