RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 FOXO3O43524 673 aa15.03■□□□□ -0
PHGDH-212ENST00000641247 ESCO1Q5FWF5 840 aa15.03■□□□□ -0
PHGDH-212ENST00000641247 COL22A1Q8NFW1 1626 aaPredicted RBP15.03■□□□□ -0
PHGDH-212ENST00000641247 IQGAP3Q86VI3 1631 aa15.02□□□□□ -0.01
PHGDH-212ENST00000641247 GLI3P10071 1580 aa15.02□□□□□ -0.01
PHGDH-212ENST00000641247 PXDNQ92626 1479 aa15.01□□□□□ -0.01
PHGDH-212ENST00000641247 SEPT12Q8IYM1 358 aa15.01□□□□□ -0.01
PHGDH-212ENST00000641247 NEXMIFQ5QGS0 1516 aa15.01□□□□□ -0.01
PHGDH-212ENST00000641247 HRCP23327 699 aa15□□□□□ -0.01
PHGDH-212ENST00000641247 SLIT2O94813 1529 aa15□□□□□ -0.01
PHGDH-212ENST00000641247 NPHP3Q7Z494 1330 aa14.99□□□□□ -0.01
PHGDH-212ENST00000641247 NUTM2FA1L443 756 aa14.99□□□□□ -0.01
PHGDH-212ENST00000641247 ROCK1Q13464 1354 aa14.98□□□□□ -0.01
PHGDH-212ENST00000641247 ONECUT3O60422 494 aaPredicted RBP14.97□□□□□ -0.01
PHGDH-212ENST00000641247 LRP5O75197 1615 aa14.95□□□□□ -0.02
PHGDH-212ENST00000641247 ITGAEP38570 1179 aa14.95□□□□□ -0.02
PHGDH-212ENST00000641247 SF3B2Q13435 895 aaKnown RBP14.95□□□□□ -0.02
PHGDH-212ENST00000641247 CABLES1Q8TDN4 633 aa14.95□□□□□ -0.02
PHGDH-212ENST00000641247 PRAG1Q86YV5 1406 aa14.94□□□□□ -0.02
PHGDH-212ENST00000641247 VPS72Q15906 364 aa14.94□□□□□ -0.02
PHGDH-212ENST00000641247 KRT27Q7Z3Y8 459 aa14.94□□□□□ -0.02
PHGDH-212ENST00000641247 WAPLQ7Z5K2 1190 aa14.94□□□□□ -0.02
PHGDH-212ENST00000641247 SPATA31A3Q5VYP0 1347 aa14.93□□□□□ -0.02
PHGDH-212ENST00000641247 HFM1A2PYH4 1435 aa14.92□□□□□ -0.02
PHGDH-212ENST00000641247 CLTCL1P53675 1640 aa14.92□□□□□ -0.02
PHGDH-212ENST00000641247 VGFO15240 615 aaPredicted RBP14.92□□□□□ -0.02
PHGDH-212ENST00000641247 PLEKHG5O94827 1062 aa14.92□□□□□ -0.02
PHGDH-212ENST00000641247 EN1Q05925 392 aaPredicted RBP14.92□□□□□ -0.02
PHGDH-212ENST00000641247 FAM182BQ5T319 152 aa14.91□□□□□ -0.02
PHGDH-212ENST00000641247 BRWD3Q6RI45 1802 aa14.91□□□□□ -0.02
PHGDH-212ENST00000641247 PLEKHH1Q9ULM0 1364 aa14.9□□□□□ -0.02
PHGDH-212ENST00000641247 R3HDM1Q15032 1099 aaKnown RBP14.9□□□□□ -0.02
PHGDH-212ENST00000641247 KRT28Q7Z3Y7 464 aa14.9□□□□□ -0.02
PHGDH-212ENST00000641247 SPHKAPQ2M3C7 1700 aa14.89□□□□□ -0.03
PHGDH-212ENST00000641247 MARF1Q9Y4F3 1742 aaKnown RBP14.89□□□□□ -0.03
PHGDH-212ENST00000641247 NAIPQ13075 1403 aa14.89□□□□□ -0.03
PHGDH-212ENST00000641247 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.89□□□□□ -0.03
PHGDH-212ENST00000641247 LRPPRCP42704 1394 aaKnown RBP14.88□□□□□ -0.03
PHGDH-212ENST00000641247 FAM83GA6ND36 823 aa14.88□□□□□ -0.03
PHGDH-212ENST00000641247 BAG6P46379 1132 aa14.88□□□□□ -0.03
PHGDH-212ENST00000641247 STK26Q9P289 416 aa14.88□□□□□ -0.03
PHGDH-212ENST00000641247 CCDC9Q9Y3X0 531 aaKnown RBP14.88□□□□□ -0.03
PHGDH-212ENST00000641247 CDC42BPGQ6DT37 1551 aa14.86□□□□□ -0.03
PHGDH-212ENST00000641247 FAM98CQ17RN3 349 aaKnown RBP14.86□□□□□ -0.03
PHGDH-212ENST00000641247 ADGRF5Q8IZF2 1346 aa14.86□□□□□ -0.03
PHGDH-212ENST00000641247 EZH2Q15910 746 aaKnown RBP14.85□□□□□ -0.03
PHGDH-212ENST00000641247 TMEM132EQ6IEE7 984 aa14.85□□□□□ -0.03
PHGDH-212ENST00000641247 RPGRIP1LQ68CZ1 1315 aa14.84□□□□□ -0.03
PHGDH-212ENST00000641247 USP32Q8NFA0 1604 aa14.84□□□□□ -0.03
PHGDH-212ENST00000641247 A0A0G2JS52 829 aa14.82□□□□□ -0.04
PHGDH-212ENST00000641247 YY1P25490 414 aa14.82□□□□□ -0.04
PHGDH-212ENST00000641247 HAP1P54257 671 aaPredicted RBP14.82□□□□□ -0.04
PHGDH-212ENST00000641247 MYT1Q01538 1121 aa14.82□□□□□ -0.04
PHGDH-212ENST00000641247 CAMKK2Q96RR4 588 aa14.81□□□□□ -0.04
PHGDH-212ENST00000641247 LMOD2Q6P5Q4 547 aa14.8□□□□□ -0.04
PHGDH-212ENST00000641247 PPARGC1BQ86YN6 1023 aaKnown RBP14.8□□□□□ -0.04
PHGDH-212ENST00000641247 BTG4Q9NY30 223 aa14.8□□□□□ -0.04
PHGDH-212ENST00000641247 PHF8Q9UPP1 1060 aa14.8□□□□□ -0.04
PHGDH-212ENST00000641247 CCDC144AA2RUR9 1427 aa14.8□□□□□ -0.04
PHGDH-212ENST00000641247 TECPR2O15040 1411 aa14.8□□□□□ -0.04
PHGDH-212ENST00000641247 TNS3Q68CZ2 1445 aa14.8□□□□□ -0.04
PHGDH-212ENST00000641247 ABCC11Q96J66 1382 aa14.79□□□□□ -0.04
PHGDH-212ENST00000641247 PSME1Q06323 249 aa14.77□□□□□ -0.05
PHGDH-212ENST00000641247 DISP2A7MBM2 1401 aa14.76□□□□□ -0.05
PHGDH-212ENST00000641247 SBNO1A3KN83 1393 aa14.76□□□□□ -0.05
PHGDH-212ENST00000641247 PMFBP1Q8TBY8 1022 aa14.76□□□□□ -0.05
PHGDH-212ENST00000641247 PLCH1Q4KWH8 1693 aa14.76□□□□□ -0.05
PHGDH-212ENST00000641247 KIF1BO60333 1816 aa14.76□□□□□ -0.05
PHGDH-212ENST00000641247 SPATA31A5Q5VU36 1347 aa14.75□□□□□ -0.05
PHGDH-212ENST00000641247 SPATA31A7Q8IWB4 1347 aa14.75□□□□□ -0.05
PHGDH-212ENST00000641247 TRIM37O94972 964 aa14.75□□□□□ -0.05
PHGDH-212ENST00000641247 RGL3Q3MIN7 710 aa14.75□□□□□ -0.05
PHGDH-212ENST00000641247 FMN2Q9NZ56 1722 aa14.73□□□□□ -0.05
PHGDH-212ENST00000641247 NRXN1Q9ULB1 1477 aa14.73□□□□□ -0.05
PHGDH-212ENST00000641247 NWD2Q9ULI1 1742 aa14.72□□□□□ -0.05
PHGDH-212ENST00000641247 SIRT1Q96EB6 747 aa14.72□□□□□ -0.05
PHGDH-212ENST00000641247 YTHDC2Q9H6S0 1430 aaKnown RBP14.72□□□□□ -0.05
PHGDH-212ENST00000641247 RRBP1Q9P2E9 1410 aaKnown RBP14.72□□□□□ -0.05
PHGDH-212ENST00000641247 PPLO60437 1756 aa14.72□□□□□ -0.05
PHGDH-212ENST00000641247 APBA3O96018 575 aa14.71□□□□□ -0.05
PHGDH-212ENST00000641247 SAFB2Q14151 953 aaKnown RBP eCLIP14.71□□□□□ -0.05
PHGDH-212ENST00000641247 SLC4A1APQ9BWU0 796 aaKnown RBP14.71□□□□□ -0.05
PHGDH-212ENST00000641247 NRAPQ86VF7 1730 aa14.71□□□□□ -0.05
PHGDH-212ENST00000641247 ARHGEF10O15013 1369 aa14.71□□□□□ -0.06
PHGDH-212ENST00000641247 KIF1AQ12756 1690 aa14.71□□□□□ -0.06
PHGDH-212ENST00000641247 ABCA3Q99758 1704 aa14.69□□□□□ -0.06
PHGDH-212ENST00000641247 SPATA31E1Q6ZUB1 1445 aa14.68□□□□□ -0.06
PHGDH-212ENST00000641247 FAM196AQ6ZSG2 479 aa14.68□□□□□ -0.06
PHGDH-212ENST00000641247 RGPD1P0DJD0 1748 aa14.68□□□□□ -0.06
PHGDH-212ENST00000641247 TNS1Q9HBL0 1735 aaKnown RBP14.68□□□□□ -0.06
PHGDH-212ENST00000641247 SPATA31A1Q5TZJ5 1347 aa14.67□□□□□ -0.06
PHGDH-212ENST00000641247 PIK3C2GO75747 1445 aa14.67□□□□□ -0.06
PHGDH-212ENST00000641247 CFAP70Q5T0N1 1121 aa14.67□□□□□ -0.06
PHGDH-212ENST00000641247 PRAM1Q96QH2 718 aa14.67□□□□□ -0.06
PHGDH-212ENST00000641247 C14orf93Q9H972 538 aaKnown RBP14.67□□□□□ -0.06
PHGDH-212ENST00000641247 THSD7AQ9UPZ6 1657 aa14.67□□□□□ -0.06
PHGDH-212ENST00000641247 RGPD8O14715 1765 aaPredicted RBP14.67□□□□□ -0.06
PHGDH-212ENST00000641247 PRR36Q9H6K5 1346 aa14.66□□□□□ -0.06
PHGDH-212ENST00000641247 KCNQ2O43526 872 aa14.65□□□□□ -0.06
PHGDH-212ENST00000641247 CHRNA2Q15822 529 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms