RNA–Protein interactions for RNA: ENST00000640958.1

SP3-208, Transcript of Sp3 transcription factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP3, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-208ENST00000640958 DLC1Q96QB1 1528 aa27.21■■□□□ 1.95
SP3-208ENST00000640958 ESF1Q9H501 851 aaKnown RBP27.21■■□□□ 1.95
SP3-208ENST00000640958 SAFB2Q14151 953 aaKnown RBP eCLIP27.2■■□□□ 1.95
SP3-208ENST00000640958 TSHZ2Q9NRE2 1034 aa27.2■■□□□ 1.95
SP3-208ENST00000640958 CABP2Q9NPB3 220 aa27.19■■□□□ 1.94
SP3-208ENST00000640958 PRAM1Q96QH2 718 aa27.19■■□□□ 1.94
SP3-208ENST00000640958 NINLQ9Y2I6 1382 aa27.18■■□□□ 1.94
SP3-208ENST00000640958 TNRQ92752 1358 aa27.17■■□□□ 1.94
SP3-208ENST00000640958 UBR1Q8IWV7 1749 aa27.16■■□□□ 1.94
SP3-208ENST00000640958 POLR3AO14802 1390 aaPredicted RBP27.16■■□□□ 1.94
SP3-208ENST00000640958 SHPRHQ149N8 1683 aa27.15■■□□□ 1.94
SP3-208ENST00000640958 CDCA7LQ96GN5 454 aa27.14■■□□□ 1.94
SP3-208ENST00000640958 CGNL1Q0VF96 1302 aa27.14■■□□□ 1.94
SP3-208ENST00000640958 MINK1Q8N4C8 1332 aaPredicted RBP27.14■■□□□ 1.93
SP3-208ENST00000640958 NSD2O96028 1365 aa27.13■■□□□ 1.93
SP3-208ENST00000640958 ATAD2Q6PL18 1390 aa27.13■■□□□ 1.93
SP3-208ENST00000640958 POGKQ9P215 609 aa27.13■■□□□ 1.93
SP3-208ENST00000640958 PLEKHH1Q9ULM0 1364 aa27.13■■□□□ 1.93
SP3-208ENST00000640958 MORC1Q86VD1 984 aa27.13■■□□□ 1.93
SP3-208ENST00000640958 A0A1W2PP64 1363 aa27.11■■□□□ 1.93
SP3-208ENST00000640958 SRPK2P78362 688 aaKnown RBP27.11■■□□□ 1.93
SP3-208ENST00000640958 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.11■■□□□ 1.93
SP3-208ENST00000640958 KNDC1Q76NI1 1749 aa27.1■■□□□ 1.93
SP3-208ENST00000640958 RCAN3Q9UKA8 241 aa27.09■■□□□ 1.93
SP3-208ENST00000640958 CD163L1Q9NR16 1453 aa27.09■■□□□ 1.93
SP3-208ENST00000640958 ZNF521Q96K83 1311 aa27.08■■□□□ 1.93
SP3-208ENST00000640958 ABCC11Q96J66 1382 aa27.08■■□□□ 1.93
SP3-208ENST00000640958 ANKRD26Q9UPS8 1709 aa27.08■■□□□ 1.93
SP3-208ENST00000640958 RRP1P56182 461 aaKnown RBP27.05■■□□□ 1.92
SP3-208ENST00000640958 METP08581 1390 aa27.03■■□□□ 1.92
SP3-208ENST00000640958 TMEM2Q9UHN6 1383 aa27.03■■□□□ 1.92
SP3-208ENST00000640958 B4GALNT3Q6L9W6 998 aa27.03■■□□□ 1.92
SP3-208ENST00000640958 CCDC146Q8IYE0 955 aa27.02■■□□□ 1.92
SP3-208ENST00000640958 CDK19Q9BWU1 502 aa27.02■■□□□ 1.92
SP3-208ENST00000640958 C3P01024 1663 aa27.02■■□□□ 1.92
SP3-208ENST00000640958 TNNT2P45379 298 aaPredicted RBP27.02■■□□□ 1.92
SP3-208ENST00000640958 NLRP1Q9C000 1473 aa27.01■■□□□ 1.91
SP3-208ENST00000640958 FER1L4A9Z1Z3 1794 aa27.01■■□□□ 1.91
SP3-208ENST00000640958 CPS1P31327 1500 aa27■■□□□ 1.91
SP3-208ENST00000640958 TECPR2O15040 1411 aa27■■□□□ 1.91
SP3-208ENST00000640958 MED14O60244 1454 aa27■■□□□ 1.91
SP3-208ENST00000640958 KIF20BQ96Q89 1820 aa27■■□□□ 1.91
SP3-208ENST00000640958 WAPLQ7Z5K2 1190 aa26.99■■□□□ 1.91
SP3-208ENST00000640958 HDGFP51858 240 aaKnown RBP26.99■■□□□ 1.91
SP3-208ENST00000640958 TERF2IPQ9NYB0 399 aa26.99■■□□□ 1.91
SP3-208ENST00000640958 APAF1O14727 1248 aa26.97■■□□□ 1.91
SP3-208ENST00000640958 FAM135BQ49AJ0 1406 aa26.96■■□□□ 1.91
SP3-208ENST00000640958 MTHFSP49914 203 aa26.96■■□□□ 1.91
SP3-208ENST00000640958 GOLGA2Q08379 1002 aa26.95■■□□□ 1.91
SP3-208ENST00000640958 DUSP27Q5VZP5 1158 aa26.95■■□□□ 1.91
SP3-208ENST00000640958 ATP7BP35670 1465 aa26.95■■□□□ 1.9
SP3-208ENST00000640958 ADAMTS13Q76LX8 1427 aa26.94■■□□□ 1.9
SP3-208ENST00000640958 NGEFQ8N5V2 710 aa26.93■■□□□ 1.9
SP3-208ENST00000640958 IQSEC2Q5JU85 1478 aa26.93■■□□□ 1.9
SP3-208ENST00000640958 HDGFL2Q7Z4V5 671 aaPredicted RBP26.92■■□□□ 1.9
SP3-208ENST00000640958 SIRT1Q96EB6 747 aa26.92■■□□□ 1.9
SP3-208ENST00000640958 CFAP53Q96M91 514 aa26.92■■□□□ 1.9
SP3-208ENST00000640958 CEBPAP49715 358 aaPredicted RBP26.91■■□□□ 1.9
SP3-208ENST00000640958 SLFN5Q08AF3 891 aa26.91■■□□□ 1.9
SP3-208ENST00000640958 CABP1Q9NZU7 370 aa26.91■■□□□ 1.9
SP3-208ENST00000640958 PLEKHG1Q9ULL1 1385 aa26.91■■□□□ 1.9
SP3-208ENST00000640958 GGNBP2Q9H3C7 697 aa26.9■■□□□ 1.9
SP3-208ENST00000640958 FYB1O15117 783 aa26.9■■□□□ 1.9
SP3-208ENST00000640958 TRMT2AQ8IZ69 625 aaKnown RBP26.9■■□□□ 1.9
SP3-208ENST00000640958 COL3A1P02461 1466 aaPredicted RBP26.88■■□□□ 1.89
SP3-208ENST00000640958 TXNDC2Q86VQ3 553 aa26.88■■□□□ 1.89
SP3-208ENST00000640958 SLIT1O75093 1534 aa26.87■■□□□ 1.89
SP3-208ENST00000640958 WASLO00401 505 aaPredicted RBP26.87■■□□□ 1.89
SP3-208ENST00000640958 ARHGAP23Q9P227 1491 aa26.87■■□□□ 1.89
SP3-208ENST00000640958 CCDC136Q96JN2 1154 aa26.86■■□□□ 1.89
SP3-208ENST00000640958 LTKP29376 864 aa26.85■■□□□ 1.89
SP3-208ENST00000640958 EXOC6Q8TAG9 804 aa26.85■■□□□ 1.89
SP3-208ENST00000640958 RUNDC1Q96C34 613 aa26.85■■□□□ 1.89
SP3-208ENST00000640958 ADGRB2O60241 1585 aa26.84■■□□□ 1.89
SP3-208ENST00000640958 SPINK5Q9NQ38 1064 aaPredicted RBP26.84■■□□□ 1.89
SP3-208ENST00000640958 CPSF1Q10570 1443 aaKnown RBP26.84■■□□□ 1.89
SP3-208ENST00000640958 TRHP20396 242 aaPredicted RBP26.83■■□□□ 1.89
SP3-208ENST00000640958 CDC42BPGQ6DT37 1551 aa26.83■■□□□ 1.89
SP3-208ENST00000640958 MON2Q7Z3U7 1717 aa26.83■■□□□ 1.89
SP3-208ENST00000640958 PPIP5K1Q6PFW1 1433 aa26.83■■□□□ 1.88
SP3-208ENST00000640958 ROBO2Q9HCK4 1378 aa26.82■■□□□ 1.88
SP3-208ENST00000640958 AKAP12Q02952 1782 aa26.82■■□□□ 1.88
SP3-208ENST00000640958 NKTRP30414 1462 aaKnown RBP26.81■■□□□ 1.88
SP3-208ENST00000640958 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.81■■□□□ 1.88
SP3-208ENST00000640958 E9PSI1 815 aa26.81■■□□□ 1.88
SP3-208ENST00000640958 DMRT2Q9Y5R5 561 aa26.81■■□□□ 1.88
SP3-208ENST00000640958 PLIN1O60240 522 aa26.8■■□□□ 1.88
SP3-208ENST00000640958 ITSN1Q15811 1721 aa26.8■■□□□ 1.88
SP3-208ENST00000640958 WWC1Q8IX03 1113 aa26.79■■□□□ 1.88
SP3-208ENST00000640958 RBM19Q9Y4C8 960 aaKnown RBP26.78■■□□□ 1.88
SP3-208ENST00000640958 EDC4Q6P2E9 1401 aaKnown RBP26.78■■□□□ 1.88
SP3-208ENST00000640958 TCP11L2Q8N4U5 519 aa26.78■■□□□ 1.88
SP3-208ENST00000640958 PHF23Q9BUL5 403 aaPredicted RBP26.78■■□□□ 1.88
SP3-208ENST00000640958 PTPRUQ92729 1446 aa26.76■■□□□ 1.87
SP3-208ENST00000640958 NUDT16Q96DE0 195 aaKnown RBP26.76■■□□□ 1.87
SP3-208ENST00000640958 TOPAZ1Q8N9V7 1692 aa26.76■■□□□ 1.87
SP3-208ENST00000640958 PNPLA6Q8IY17 1366 aa26.75■■□□□ 1.87
SP3-208ENST00000640958 U2AF1L5P0DN76 240 aaPredicted RBP26.74■■□□□ 1.87
SP3-208ENST00000640958 U2AF1Q01081 240 aaKnown RBP eCLIP26.74■■□□□ 1.87
SP3-208ENST00000640958 EID1Q9Y6B2 187 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms