RNA–Protein interactions for RNA: ENST00000640715.1

SLC35A3-222, Transcript of solute carrier family 35 member A3, humanhuman

TSL 5 BASIC

Gene SLC35A3, Length 1,989 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35A3-222ENST00000640715 TMC1Q8TDI8 760 aa27.48■■□□□ 1.99
SLC35A3-222ENST00000640715 SRPK2P78362 688 aaKnown RBP27.48■■□□□ 1.99
SLC35A3-222ENST00000640715 KNSTRNQ9Y448 316 aa27.48■■□□□ 1.99
SLC35A3-222ENST00000640715 FAM135BQ49AJ0 1406 aa27.46■■□□□ 1.99
SLC35A3-222ENST00000640715 SLC12A5Q9H2X9 1139 aa27.46■■□□□ 1.99
SLC35A3-222ENST00000640715 PTPRUQ92729 1446 aa27.45■■□□□ 1.98
SLC35A3-222ENST00000640715 DIP2AQ14689 1571 aa27.45■■□□□ 1.98
SLC35A3-222ENST00000640715 CPS1P31327 1500 aa27.45■■□□□ 1.98
SLC35A3-222ENST00000640715 CDK19Q9BWU1 502 aa27.44■■□□□ 1.98
SLC35A3-222ENST00000640715 KTN1Q86UP2 1357 aaKnown RBP27.44■■□□□ 1.98
SLC35A3-222ENST00000640715 KDM4FA0A1W2PPD8 638 aa27.44■■□□□ 1.98
SLC35A3-222ENST00000640715 RALBP1Q15311 655 aa27.44■■□□□ 1.98
SLC35A3-222ENST00000640715 CCDC184Q52MB2 194 aa27.44■■□□□ 1.98
SLC35A3-222ENST00000640715 CC2D1BQ5T0F9 858 aaKnown RBP27.44■■□□□ 1.98
SLC35A3-222ENST00000640715 AMOTL2Q9Y2J4 779 aa27.44■■□□□ 1.98
SLC35A3-222ENST00000640715 ROBO2Q9HCK4 1378 aa27.43■■□□□ 1.98
SLC35A3-222ENST00000640715 CARD14Q9BXL6 1004 aa27.4■■□□□ 1.98
SLC35A3-222ENST00000640715 MRS2Q9HD23 443 aa27.39■■□□□ 1.98
SLC35A3-222ENST00000640715 ATAD2Q6PL18 1390 aa27.37■■□□□ 1.97
SLC35A3-222ENST00000640715 PARD3Q8TEW0 1356 aa27.37■■□□□ 1.97
SLC35A3-222ENST00000640715 AMER1Q5JTC6 1135 aaPredicted RBP27.37■■□□□ 1.97
SLC35A3-222ENST00000640715 WASLO00401 505 aaPredicted RBP27.36■■□□□ 1.97
SLC35A3-222ENST00000640715 MYBBP1AQ9BQG0 1328 aaKnown RBP27.36■■□□□ 1.97
SLC35A3-222ENST00000640715 NCKAP5LQ9HCH0 1330 aa27.35■■□□□ 1.97
SLC35A3-222ENST00000640715 PIK3R4Q99570 1358 aa27.34■■□□□ 1.97
SLC35A3-222ENST00000640715 CENPBP07199 599 aaPredicted RBP27.34■■□□□ 1.97
SLC35A3-222ENST00000640715 NPHP4O75161 1426 aaPredicted RBP27.33■■□□□ 1.97
SLC35A3-222ENST00000640715 NINLQ9Y2I6 1382 aa27.33■■□□□ 1.97
SLC35A3-222ENST00000640715 PTCH1Q13635 1447 aa27.3■■□□□ 1.96
SLC35A3-222ENST00000640715 ANKRD36BQ8N2N9 1353 aa27.3■■□□□ 1.96
SLC35A3-222ENST00000640715 NPC1L1Q9UHC9 1359 aa27.3■■□□□ 1.96
SLC35A3-222ENST00000640715 KCNA6P17658 529 aa27.3■■□□□ 1.96
SLC35A3-222ENST00000640715 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.29■■□□□ 1.96
SLC35A3-222ENST00000640715 NSD3Q9BZ95 1437 aa27.29■■□□□ 1.96
SLC35A3-222ENST00000640715 XRN1Q8IZH2 1706 aaKnown RBP27.29■■□□□ 1.96
SLC35A3-222ENST00000640715 CABP1Q9NZU7 370 aa27.28■■□□□ 1.96
SLC35A3-222ENST00000640715 FAM9BQ8IZU0 186 aa27.26■■□□□ 1.95
SLC35A3-222ENST00000640715 TERF2IPQ9NYB0 399 aa27.26■■□□□ 1.95
SLC35A3-222ENST00000640715 CHD2O14647 1828 aaKnown RBP27.26■■□□□ 1.95
SLC35A3-222ENST00000640715 NLRP13Q86W25 1043 aa27.26■■□□□ 1.95
SLC35A3-222ENST00000640715 NUDT16Q96DE0 195 aaKnown RBP27.25■■□□□ 1.95
SLC35A3-222ENST00000640715 BRD4O60885 1362 aaPredicted RBP27.25■■□□□ 1.95
SLC35A3-222ENST00000640715 A0A1W2PP64 1363 aa27.24■■□□□ 1.95
SLC35A3-222ENST00000640715 HSPA2P54652 639 aa27.23■■□□□ 1.95
SLC35A3-222ENST00000640715 ADGRB2O60241 1585 aa27.22■■□□□ 1.95
SLC35A3-222ENST00000640715 HDGFL2Q7Z4V5 671 aaPredicted RBP27.22■■□□□ 1.95
SLC35A3-222ENST00000640715 CD163L1Q9NR16 1453 aa27.21■■□□□ 1.95
SLC35A3-222ENST00000640715 CGNL1Q0VF96 1302 aa27.21■■□□□ 1.95
SLC35A3-222ENST00000640715 CCDC61Q9Y6R9 512 aa27.2■■□□□ 1.95
SLC35A3-222ENST00000640715 PPIP5K1Q6PFW1 1433 aa27.19■■□□□ 1.94
SLC35A3-222ENST00000640715 PPP2R1AP30153 589 aa27.18■■□□□ 1.94
SLC35A3-222ENST00000640715 PRR36Q9H6K5 1346 aa27.18■■□□□ 1.94
SLC35A3-222ENST00000640715 NUTM2FA1L443 756 aa27.17■■□□□ 1.94
SLC35A3-222ENST00000640715 PNISRQ8TF01 805 aaKnown RBP27.17■■□□□ 1.94
SLC35A3-222ENST00000640715 USP32Q8NFA0 1604 aa27.16■■□□□ 1.94
SLC35A3-222ENST00000640715 ATP7BP35670 1465 aa27.15■■□□□ 1.94
SLC35A3-222ENST00000640715 MORC1Q86VD1 984 aa27.15■■□□□ 1.94
SLC35A3-222ENST00000640715 LMTK3Q96Q04 1460 aa27.13■■□□□ 1.93
SLC35A3-222ENST00000640715 RBM33Q96EV2 1170 aaKnown RBP27.12■■□□□ 1.93
SLC35A3-222ENST00000640715 HNRNPUQ00839 825 aaKnown RBP eCLIP27.11■■□□□ 1.93
SLC35A3-222ENST00000640715 NSD2O96028 1365 aa27.1■■□□□ 1.93
SLC35A3-222ENST00000640715 CPSF1Q10570 1443 aaKnown RBP27.1■■□□□ 1.93
SLC35A3-222ENST00000640715 FYB1O15117 783 aa27.08■■□□□ 1.92
SLC35A3-222ENST00000640715 TNNT2P45379 298 aaPredicted RBP27.08■■□□□ 1.92
SLC35A3-222ENST00000640715 GGNBP2Q9H3C7 697 aa27.08■■□□□ 1.92
SLC35A3-222ENST00000640715 CDC42BPGQ6DT37 1551 aa27.07■■□□□ 1.92
SLC35A3-222ENST00000640715 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.06■■□□□ 1.92
SLC35A3-222ENST00000640715 PLEKHG3A1L390 1219 aa27.06■■□□□ 1.92
SLC35A3-222ENST00000640715 ZNF692Q9BU19 519 aaPredicted RBP27.06■■□□□ 1.92
SLC35A3-222ENST00000640715 NWD1Q149M9 1564 aa27.05■■□□□ 1.92
SLC35A3-222ENST00000640715 TOPAZ1Q8N9V7 1692 aa27.04■■□□□ 1.92
SLC35A3-222ENST00000640715 PROSER2Q86WR7 435 aaPredicted RBP27.04■■□□□ 1.92
SLC35A3-222ENST00000640715 NALCNQ8IZF0 1738 aa27.04■■□□□ 1.92
SLC35A3-222ENST00000640715 ACEP12821 1306 aa27.03■■□□□ 1.92
SLC35A3-222ENST00000640715 C14orf37Q86TY3 774 aa27.02■■□□□ 1.92
SLC35A3-222ENST00000640715 RGPD8O14715 1765 aaPredicted RBP27.02■■□□□ 1.92
SLC35A3-222ENST00000640715 EDC4Q6P2E9 1401 aaKnown RBP27.02■■□□□ 1.92
SLC35A3-222ENST00000640715 ITSN1Q15811 1721 aa27.02■■□□□ 1.92
SLC35A3-222ENST00000640715 AKAP12Q02952 1782 aa27.01■■□□□ 1.91
SLC35A3-222ENST00000640715 PMFBP1Q8TBY8 1022 aa27■■□□□ 1.91
SLC35A3-222ENST00000640715 ADGRL3Q9HAR2 1447 aa27■■□□□ 1.91
SLC35A3-222ENST00000640715 FMN2Q9NZ56 1722 aa27■■□□□ 1.91
SLC35A3-222ENST00000640715 STRCQ7RTU9 1775 aa26.99■■□□□ 1.91
SLC35A3-222ENST00000640715 ANKARQ7Z5J8 1434 aa26.99■■□□□ 1.91
SLC35A3-222ENST00000640715 KIF20BQ96Q89 1820 aa26.99■■□□□ 1.91
SLC35A3-222ENST00000640715 MON2Q7Z3U7 1717 aa26.99■■□□□ 1.91
SLC35A3-222ENST00000640715 NKTRP30414 1462 aaKnown RBP26.99■■□□□ 1.91
SLC35A3-222ENST00000640715 ANKRD26Q9UPS8 1709 aa26.97■■□□□ 1.91
SLC35A3-222ENST00000640715 NGDNQ8NEJ9 315 aaKnown RBP26.96■■□□□ 1.91
SLC35A3-222ENST00000640715 NME9Q86XW9 330 aa26.95■■□□□ 1.91
SLC35A3-222ENST00000640715 MTHFSP49914 203 aa26.95■■□□□ 1.9
SLC35A3-222ENST00000640715 WDR43Q15061 677 aaKnown RBP eCLIP26.93■■□□□ 1.9
SLC35A3-222ENST00000640715 STRCP1A6NGW2 1772 aa26.93■■□□□ 1.9
SLC35A3-222ENST00000640715 USP6P35125 1406 aa26.92■■□□□ 1.9
SLC35A3-222ENST00000640715 ADAMTS8Q9UP79 889 aa26.92■■□□□ 1.9
SLC35A3-222ENST00000640715 POLR3AO14802 1390 aaPredicted RBP26.92■■□□□ 1.9
SLC35A3-222ENST00000640715 TTC21BQ7Z4L5 1316 aa26.92■■□□□ 1.9
SLC35A3-222ENST00000640715 ZRANB1Q9UGI0 708 aa26.91■■□□□ 1.9
SLC35A3-222ENST00000640715 ZBED9Q6R2W3 1325 aa26.89■■□□□ 1.9
SLC35A3-222ENST00000640715 SENP3-EIF4A1A0A087X0R7 540 aa26.89■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms