RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 NAIPQ13075 1403 aa8.41□□□□□ -1.06
PDE4D-229ENST00000638939 METP08581 1390 aa8.41□□□□□ -1.06
PDE4D-229ENST00000638939 BRINP3Q76B58 766 aa8.41□□□□□ -1.06
PDE4D-229ENST00000638939 KIF1AQ12756 1690 aa8.4□□□□□ -1.06
PDE4D-229ENST00000638939 HFM1A2PYH4 1435 aa8.4□□□□□ -1.06
PDE4D-229ENST00000638939 NUTM2DQ5VT03 806 aaPredicted RBP8.4□□□□□ -1.06
PDE4D-229ENST00000638939 ZNF772Q68DY9 489 aaPredicted RBP8.4□□□□□ -1.06
PDE4D-229ENST00000638939 AMOTL2Q9Y2J4 779 aa8.4□□□□□ -1.06
PDE4D-229ENST00000638939 FMN2Q9NZ56 1722 aa8.4□□□□□ -1.07
PDE4D-229ENST00000638939 ABCA3Q99758 1704 aa8.39□□□□□ -1.07
PDE4D-229ENST00000638939 C1orf167Q5SNV9 1468 aa8.38□□□□□ -1.07
PDE4D-229ENST00000638939 PNPLA6Q8IY17 1366 aa8.38□□□□□ -1.07
PDE4D-229ENST00000638939 MEX3CQ5U5Q3 659 aaKnown RBP8.38□□□□□ -1.07
PDE4D-229ENST00000638939 RGPD8O14715 1765 aaPredicted RBP8.38□□□□□ -1.07
PDE4D-229ENST00000638939 RGS12O14924 1447 aa8.37□□□□□ -1.07
PDE4D-229ENST00000638939 PLCB2Q00722 1185 aa8.37□□□□□ -1.07
PDE4D-229ENST00000638939 ZNF326Q5BKZ1 582 aaKnown RBP8.36□□□□□ -1.07
PDE4D-229ENST00000638939 NWD2Q9ULI1 1742 aa8.36□□□□□ -1.07
PDE4D-229ENST00000638939 PXDNQ92626 1479 aa8.36□□□□□ -1.07
PDE4D-229ENST00000638939 ROBO2Q9HCK4 1378 aa8.35□□□□□ -1.07
PDE4D-229ENST00000638939 PLCH1Q4KWH8 1693 aa8.35□□□□□ -1.07
PDE4D-229ENST00000638939 MYOM2P54296 1465 aa8.35□□□□□ -1.07
PDE4D-229ENST00000638939 ITGAEP38570 1179 aa8.35□□□□□ -1.07
PDE4D-229ENST00000638939 VASPP50552 380 aaPredicted RBP8.35□□□□□ -1.07
PDE4D-229ENST00000638939 BRWD3Q6RI45 1802 aa8.35□□□□□ -1.07
PDE4D-229ENST00000638939 TECPR2O15040 1411 aa8.35□□□□□ -1.07
PDE4D-229ENST00000638939 AFF2P51816 1311 aa8.34□□□□□ -1.07
PDE4D-229ENST00000638939 USP32Q8NFA0 1604 aa8.34□□□□□ -1.07
PDE4D-229ENST00000638939 RXRBP28702 533 aa8.34□□□□□ -1.07
PDE4D-229ENST00000638939 UPF1Q92900 1129 aaKnown RBP eCLIP8.34□□□□□ -1.07
PDE4D-229ENST00000638939 LRRC59Q96AG4 307 aaKnown RBP8.34□□□□□ -1.07
PDE4D-229ENST00000638939 RPGRIP1LQ68CZ1 1315 aa8.33□□□□□ -1.08
PDE4D-229ENST00000638939 TRIM52Q96A61 297 aa8.33□□□□□ -1.08
PDE4D-229ENST00000638939 SOS2Q07890 1332 aaPredicted RBP8.32□□□□□ -1.08
PDE4D-229ENST00000638939 ADGRB2O60241 1585 aa8.32□□□□□ -1.08
PDE4D-229ENST00000638939 PIK3C2GO75747 1445 aa8.32□□□□□ -1.08
PDE4D-229ENST00000638939 SPATA31E1Q6ZUB1 1445 aa8.32□□□□□ -1.08
PDE4D-229ENST00000638939 VGFO15240 615 aaPredicted RBP8.32□□□□□ -1.08
PDE4D-229ENST00000638939 CRYBG1Q9Y4K1 1723 aa8.32□□□□□ -1.08
PDE4D-229ENST00000638939 CCDC144AA2RUR9 1427 aa8.31□□□□□ -1.08
PDE4D-229ENST00000638939 ATRNO75882 1429 aa8.31□□□□□ -1.08
PDE4D-229ENST00000638939 NUTM2BA6NNL0 878 aaPredicted RBP8.31□□□□□ -1.08
PDE4D-229ENST00000638939 NUTM2EB1AL46 878 aaPredicted RBP8.31□□□□□ -1.08
PDE4D-229ENST00000638939 NUTM2AQ8IVF1 878 aaPredicted RBP8.31□□□□□ -1.08
PDE4D-229ENST00000638939 ZBTB12Q9Y330 459 aaPredicted RBP8.31□□□□□ -1.08
PDE4D-229ENST00000638939 ITSN1Q15811 1721 aa8.3□□□□□ -1.08
PDE4D-229ENST00000638939 NRAPQ86VF7 1730 aa8.3□□□□□ -1.08
PDE4D-229ENST00000638939 TRPM3Q9HCF6 1732 aaPredicted RBP8.3□□□□□ -1.08
PDE4D-229ENST00000638939 RBM6P78332 1123 aaKnown RBP8.3□□□□□ -1.08
PDE4D-229ENST00000638939 PROM2Q8N271 834 aa8.3□□□□□ -1.08
PDE4D-229ENST00000638939 NRXN1Q9ULB1 1477 aa8.3□□□□□ -1.08
PDE4D-229ENST00000638939 DDX17Q92841 729 aaKnown RBP8.29□□□□□ -1.08
PDE4D-229ENST00000638939 C8orf37Q96NL8 207 aa8.29□□□□□ -1.08
PDE4D-229ENST00000638939 ATAD2Q6PL18 1390 aa8.29□□□□□ -1.08
PDE4D-229ENST00000638939 ANKRD30BQ9BXX2 1392 aa8.29□□□□□ -1.08
PDE4D-229ENST00000638939 GLI3P10071 1580 aa8.29□□□□□ -1.08
PDE4D-229ENST00000638939 ALS2Q96Q42 1657 aa8.29□□□□□ -1.08
PDE4D-229ENST00000638939 NPHP3Q7Z494 1330 aa8.29□□□□□ -1.08
PDE4D-229ENST00000638939 LRPPRCP42704 1394 aaKnown RBP8.28□□□□□ -1.08
PDE4D-229ENST00000638939 BCL9LQ86UU0 1499 aa8.27□□□□□ -1.09
PDE4D-229ENST00000638939 ARHGEF28Q8N1W1 1705 aaKnown RBP8.27□□□□□ -1.09
PDE4D-229ENST00000638939 HAP1P54257 671 aaPredicted RBP8.27□□□□□ -1.09
PDE4D-229ENST00000638939 FNBP4Q8N3X1 1017 aaPredicted RBP8.27□□□□□ -1.09
PDE4D-229ENST00000638939 NGLY1Q96IV0 654 aa8.27□□□□□ -1.09
PDE4D-229ENST00000638939 ORAI2Q96SN7 254 aa8.27□□□□□ -1.09
PDE4D-229ENST00000638939 SLIT2O94813 1529 aa8.27□□□□□ -1.09
PDE4D-229ENST00000638939 DLC1Q96QB1 1528 aa8.27□□□□□ -1.09
PDE4D-229ENST00000638939 ABCC11Q96J66 1382 aa8.26□□□□□ -1.09
PDE4D-229ENST00000638939 PPARGC1BQ86YN6 1023 aaKnown RBP8.26□□□□□ -1.09
PDE4D-229ENST00000638939 QTRT2Q9H974 415 aaKnown RBP8.26□□□□□ -1.09
PDE4D-229ENST00000638939 YTHDC2Q9H6S0 1430 aaKnown RBP8.26□□□□□ -1.09
PDE4D-229ENST00000638939 RGPD1P0DJD0 1748 aa8.26□□□□□ -1.09
PDE4D-229ENST00000638939 LRP5O75197 1615 aa8.25□□□□□ -1.09
PDE4D-229ENST00000638939 ADAMTS2O95450 1211 aa8.25□□□□□ -1.09
PDE4D-229ENST00000638939 TRPC5Q9UL62 973 aaPredicted RBP8.25□□□□□ -1.09
PDE4D-229ENST00000638939 ADGRF5Q8IZF2 1346 aa8.25□□□□□ -1.09
PDE4D-229ENST00000638939 COL14A1Q05707 1796 aaKnown RBP8.25□□□□□ -1.09
PDE4D-229ENST00000638939 TOPAZ1Q8N9V7 1692 aa8.24□□□□□ -1.09
PDE4D-229ENST00000638939 ADGRB1O14514 1584 aa8.24□□□□□ -1.09
PDE4D-229ENST00000638939 TNS3Q68CZ2 1445 aa8.24□□□□□ -1.09
PDE4D-229ENST00000638939 SPINK5Q9NQ38 1064 aaPredicted RBP8.24□□□□□ -1.09
PDE4D-229ENST00000638939 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.24□□□□□ -1.09
PDE4D-229ENST00000638939 USP21Q9UK80 565 aa8.24□□□□□ -1.09
PDE4D-229ENST00000638939 PHRF1Q9P1Y6 1649 aaKnown RBP8.24□□□□□ -1.09
PDE4D-229ENST00000638939 RALGAPBQ86X10 1494 aa8.24□□□□□ -1.09
PDE4D-229ENST00000638939 TNS1Q9HBL0 1735 aaKnown RBP8.23□□□□□ -1.09
PDE4D-229ENST00000638939 ANKARQ7Z5J8 1434 aa8.23□□□□□ -1.09
PDE4D-229ENST00000638939 ESCO1Q5FWF5 840 aa8.23□□□□□ -1.09
PDE4D-229ENST00000638939 ACIN1Q9UKV3 1341 aaKnown RBP8.23□□□□□ -1.09
PDE4D-229ENST00000638939 KIAA1210Q9ULL0 1709 aa8.23□□□□□ -1.09
PDE4D-229ENST00000638939 PLEKHH1Q9ULM0 1364 aa8.22□□□□□ -1.09
PDE4D-229ENST00000638939 THSD7AQ9UPZ6 1657 aa8.22□□□□□ -1.09
PDE4D-229ENST00000638939 MKRN4PQ13434 485 aaPredicted RBP8.22□□□□□ -1.09
PDE4D-229ENST00000638939 VSIG10Q8N0Z9 540 aa8.22□□□□□ -1.09
PDE4D-229ENST00000638939 TULP4Q9NRJ4 1543 aa8.22□□□□□ -1.09
PDE4D-229ENST00000638939 SPATA31A3Q5VYP0 1347 aa8.21□□□□□ -1.1
PDE4D-229ENST00000638939 SBNO1A3KN83 1393 aa8.21□□□□□ -1.1
PDE4D-229ENST00000638939 FOXO3O43524 673 aa8.2□□□□□ -1.1
PDE4D-229ENST00000638939 SIRT1Q96EB6 747 aa8.2□□□□□ -1.1
PDE4D-229ENST00000638939 MPHOSPH9Q99550 1183 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms