RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 DIP2AQ14689 1571 aa29■■■□□ 2.23
CLN8-213ENST00000637156 TULP4Q9NRJ4 1543 aa28.99■■■□□ 2.23
CLN8-213ENST00000637156 NPHP4O75161 1426 aaPredicted RBP28.99■■■□□ 2.23
CLN8-213ENST00000637156 PIK3R4Q99570 1358 aa28.98■■■□□ 2.23
CLN8-213ENST00000637156 CDK19Q9BWU1 502 aa28.97■■■□□ 2.23
CLN8-213ENST00000637156 PRKRIP1Q9H875 184 aaPredicted RBP28.96■■■□□ 2.23
CLN8-213ENST00000637156 CPS1P31327 1500 aa28.96■■■□□ 2.23
CLN8-213ENST00000637156 KNDC1Q76NI1 1749 aa28.96■■■□□ 2.23
CLN8-213ENST00000637156 SLC12A5Q9H2X9 1139 aa28.95■■■□□ 2.23
CLN8-213ENST00000637156 KCNA6P17658 529 aa28.95■■■□□ 2.22
CLN8-213ENST00000637156 SRPK2P78362 688 aaKnown RBP28.95■■■□□ 2.22
CLN8-213ENST00000637156 TMC1Q8TDI8 760 aa28.92■■■□□ 2.22
CLN8-213ENST00000637156 LMTK3Q96Q04 1460 aa28.92■■■□□ 2.22
CLN8-213ENST00000637156 WASLO00401 505 aaPredicted RBP28.91■■■□□ 2.22
CLN8-213ENST00000637156 CNGB1Q14028 1251 aaPredicted RBP28.9■■■□□ 2.22
CLN8-213ENST00000637156 MYOM1P52179 1685 aa28.88■■■□□ 2.21
CLN8-213ENST00000637156 PTCH1Q13635 1447 aa28.88■■■□□ 2.21
CLN8-213ENST00000637156 CARD14Q9BXL6 1004 aa28.88■■■□□ 2.21
CLN8-213ENST00000637156 CCER2I3L3R5 266 aa28.87■■■□□ 2.21
CLN8-213ENST00000637156 KNSTRNQ9Y448 316 aa28.85■■■□□ 2.21
CLN8-213ENST00000637156 XRN1Q8IZH2 1706 aaKnown RBP28.84■■■□□ 2.21
CLN8-213ENST00000637156 ATAD2Q6PL18 1390 aa28.83■■■□□ 2.21
CLN8-213ENST00000637156 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.82■■■□□ 2.2
CLN8-213ENST00000637156 CHD2O14647 1828 aaKnown RBP28.81■■■□□ 2.2
CLN8-213ENST00000637156 AMER1Q5JTC6 1135 aaPredicted RBP28.8■■■□□ 2.2
CLN8-213ENST00000637156 CABP1Q9NZU7 370 aa28.8■■■□□ 2.2
CLN8-213ENST00000637156 CC2D1BQ5T0F9 858 aaKnown RBP28.79■■■□□ 2.2
CLN8-213ENST00000637156 NUDT16Q96DE0 195 aaKnown RBP28.78■■■□□ 2.2
CLN8-213ENST00000637156 NINLQ9Y2I6 1382 aa28.77■■■□□ 2.2
CLN8-213ENST00000637156 RBM33Q96EV2 1170 aaKnown RBP28.77■■■□□ 2.2
CLN8-213ENST00000637156 RALBP1Q15311 655 aa28.76■■■□□ 2.2
CLN8-213ENST00000637156 CCDC184Q52MB2 194 aa28.76■■■□□ 2.19
CLN8-213ENST00000637156 ANKRD36BQ8N2N9 1353 aa28.75■■■□□ 2.19
CLN8-213ENST00000637156 KTN1Q86UP2 1357 aaKnown RBP28.75■■■□□ 2.19
CLN8-213ENST00000637156 CCDC61Q9Y6R9 512 aa28.74■■■□□ 2.19
CLN8-213ENST00000637156 PRR36Q9H6K5 1346 aa28.74■■■□□ 2.19
CLN8-213ENST00000637156 ADGRB2O60241 1585 aa28.72■■■□□ 2.19
CLN8-213ENST00000637156 PARD3Q8TEW0 1356 aa28.72■■■□□ 2.19
CLN8-213ENST00000637156 NUTM2FA1L443 756 aa28.71■■■□□ 2.19
CLN8-213ENST00000637156 TERF2IPQ9NYB0 399 aa28.71■■■□□ 2.19
CLN8-213ENST00000637156 CD163L1Q9NR16 1453 aa28.71■■■□□ 2.19
CLN8-213ENST00000637156 A0A1W2PP64 1363 aa28.7■■■□□ 2.19
CLN8-213ENST00000637156 NPC1L1Q9UHC9 1359 aa28.7■■■□□ 2.19
CLN8-213ENST00000637156 STRCQ7RTU9 1775 aa28.7■■■□□ 2.18
CLN8-213ENST00000637156 NSD3Q9BZ95 1437 aa28.69■■■□□ 2.18
CLN8-213ENST00000637156 PPIP5K1Q6PFW1 1433 aa28.67■■■□□ 2.18
CLN8-213ENST00000637156 PROSER2Q86WR7 435 aaPredicted RBP28.67■■■□□ 2.18
CLN8-213ENST00000637156 ATP7BP35670 1465 aa28.66■■■□□ 2.18
CLN8-213ENST00000637156 HDGFL2Q7Z4V5 671 aaPredicted RBP28.66■■■□□ 2.18
CLN8-213ENST00000637156 MYBBP1AQ9BQG0 1328 aaKnown RBP28.65■■■□□ 2.18
CLN8-213ENST00000637156 NWD1Q149M9 1564 aa28.65■■■□□ 2.18
CLN8-213ENST00000637156 YTHDC1Q96MU7 727 aaKnown RBP28.63■■■□□ 2.17
CLN8-213ENST00000637156 MRS2Q9HD23 443 aa28.63■■■□□ 2.17
CLN8-213ENST00000637156 PLEKHG3A1L390 1219 aa28.62■■■□□ 2.17
CLN8-213ENST00000637156 CPSF1Q10570 1443 aaKnown RBP28.61■■■□□ 2.17
CLN8-213ENST00000637156 CGNL1Q0VF96 1302 aa28.61■■■□□ 2.17
CLN8-213ENST00000637156 ADGRL3Q9HAR2 1447 aa28.58■■■□□ 2.17
CLN8-213ENST00000637156 C14orf37Q86TY3 774 aa28.58■■■□□ 2.17
CLN8-213ENST00000637156 NLRP13Q86W25 1043 aa28.57■■■□□ 2.16
CLN8-213ENST00000637156 ZNF692Q9BU19 519 aaPredicted RBP28.57■■■□□ 2.16
CLN8-213ENST00000637156 NKTRP30414 1462 aaKnown RBP28.57■■■□□ 2.16
CLN8-213ENST00000637156 FYB1O15117 783 aa28.57■■■□□ 2.16
CLN8-213ENST00000637156 ACEP12821 1306 aa28.56■■■□□ 2.16
CLN8-213ENST00000637156 PPP2R1AP30153 589 aa28.55■■■□□ 2.16
CLN8-213ENST00000637156 USP32Q8NFA0 1604 aa28.55■■■□□ 2.16
CLN8-213ENST00000637156 STRCP1A6NGW2 1772 aa28.55■■■□□ 2.16
CLN8-213ENST00000637156 NALCNQ8IZF0 1738 aa28.54■■■□□ 2.16
CLN8-213ENST00000637156 PMFBP1Q8TBY8 1022 aa28.54■■■□□ 2.16
CLN8-213ENST00000637156 C19orf44Q9H6X5 657 aa28.54■■■□□ 2.16
CLN8-213ENST00000637156 BRD4O60885 1362 aaPredicted RBP28.53■■■□□ 2.16
CLN8-213ENST00000637156 TMEM94Q12767 1356 aa28.53■■■□□ 2.16
CLN8-213ENST00000637156 MORC1Q86VD1 984 aa28.53■■■□□ 2.16
CLN8-213ENST00000637156 DMRT2Q9Y5R5 561 aa28.53■■■□□ 2.16
CLN8-213ENST00000637156 ANKARQ7Z5J8 1434 aa28.52■■■□□ 2.16
CLN8-213ENST00000637156 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.52■■■□□ 2.16
CLN8-213ENST00000637156 ZNF335Q9H4Z2 1342 aaPredicted RBP28.52■■■□□ 2.16
CLN8-213ENST00000637156 GGNBP2Q9H3C7 697 aa28.51■■■□□ 2.15
CLN8-213ENST00000637156 CDC42BPGQ6DT37 1551 aa28.51■■■□□ 2.15
CLN8-213ENST00000637156 PNISRQ8TF01 805 aaKnown RBP28.49■■■□□ 2.15
CLN8-213ENST00000637156 NSD2O96028 1365 aa28.49■■■□□ 2.15
CLN8-213ENST00000637156 FAM9BQ8IZU0 186 aa28.49■■■□□ 2.15
CLN8-213ENST00000637156 TOPAZ1Q8N9V7 1692 aa28.48■■■□□ 2.15
CLN8-213ENST00000637156 FMN2Q9NZ56 1722 aa28.48■■■□□ 2.15
CLN8-213ENST00000637156 EDC4Q6P2E9 1401 aaKnown RBP28.47■■■□□ 2.15
CLN8-213ENST00000637156 NCOA3Q9Y6Q9 1424 aa28.47■■■□□ 2.15
CLN8-213ENST00000637156 TNNT2P45379 298 aaPredicted RBP28.46■■■□□ 2.15
CLN8-213ENST00000637156 NGDNQ8NEJ9 315 aaKnown RBP28.46■■■□□ 2.15
CLN8-213ENST00000637156 RGPD8O14715 1765 aaPredicted RBP28.46■■■□□ 2.15
CLN8-213ENST00000637156 POLR3AO14802 1390 aaPredicted RBP28.46■■■□□ 2.15
CLN8-213ENST00000637156 ESCO1Q5FWF5 840 aa28.43■■■□□ 2.14
CLN8-213ENST00000637156 NME9Q86XW9 330 aa28.43■■■□□ 2.14
CLN8-213ENST00000637156 PHF8Q9UPP1 1060 aa28.43■■■□□ 2.14
CLN8-213ENST00000637156 USP6P35125 1406 aa28.42■■■□□ 2.14
CLN8-213ENST00000637156 TTC21BQ7Z4L5 1316 aa28.42■■■□□ 2.14
CLN8-213ENST00000637156 ORAI2Q96SN7 254 aa28.4■■■□□ 2.14
CLN8-213ENST00000637156 ZRANB1Q9UGI0 708 aa28.4■■■□□ 2.14
CLN8-213ENST00000637156 SSH2Q76I76 1423 aa28.4■■■□□ 2.14
CLN8-213ENST00000637156 AKAP12Q02952 1782 aa28.4■■■□□ 2.14
CLN8-213ENST00000637156 ATF3P18847 181 aa28.4■■■□□ 2.14
CLN8-213ENST00000637156 LRRC7Q96NW7 1537 aa28.39■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms