RNA–Protein interactions for RNA: ENST00000637115.2

TCF4-283, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 7,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-283ENST00000637115 SMC4Q9NTJ3 1288 aa9.45□□□□□ -0.9
TCF4-283ENST00000637115 TCERG1O14776 1098 aaKnown RBP9.45□□□□□ -0.9
TCF4-283ENST00000637115 SPINK5Q9NQ38 1064 aaPredicted RBP9.45□□□□□ -0.9
TCF4-283ENST00000637115 SLC26A8Q96RN1 970 aa9.45□□□□□ -0.9
TCF4-283ENST00000637115 PDE4AP27815 886 aa9.44□□□□□ -0.9
TCF4-283ENST00000637115 RIPK4P57078 832 aa9.44□□□□□ -0.9
TCF4-283ENST00000637115 WWC1Q8IX03 1113 aa9.44□□□□□ -0.9
TCF4-283ENST00000637115 TET3O43151 1660 aa9.44□□□□□ -0.9
TCF4-283ENST00000637115 DMRT2Q9Y5R5 561 aa9.44□□□□□ -0.9
TCF4-283ENST00000637115 ERVK-7P63135 1459 aa9.44□□□□□ -0.9
TCF4-283ENST00000637115 ITPRIPQ8IWB1 547 aa9.43□□□□□ -0.9
TCF4-283ENST00000637115 EID1Q9Y6B2 187 aa9.43□□□□□ -0.9
TCF4-283ENST00000637115 MLH3Q9UHC1 1453 aa9.43□□□□□ -0.9
TCF4-283ENST00000637115 MSH5O43196 834 aa9.43□□□□□ -0.9
TCF4-283ENST00000637115 NEO1Q92859 1461 aa9.43□□□□□ -0.9
TCF4-283ENST00000637115 PAK3O75914 559 aaPredicted RBP9.43□□□□□ -0.9
TCF4-283ENST00000637115 COG3Q96JB2 828 aa9.43□□□□□ -0.9
TCF4-283ENST00000637115 MADDQ8WXG6 1647 aa9.43□□□□□ -0.9
TCF4-283ENST00000637115 INO80Q9ULG1 1556 aaPredicted RBP9.42□□□□□ -0.9
TCF4-283ENST00000637115 LMOD2Q6P5Q4 547 aa9.42□□□□□ -0.9
TCF4-283ENST00000637115 EFCAB6Q5THR3 1501 aa9.42□□□□□ -0.9
TCF4-283ENST00000637115 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.42□□□□□ -0.9
TCF4-283ENST00000637115 NCKAP5LQ9HCH0 1330 aa9.42□□□□□ -0.9
TCF4-283ENST00000637115 HECW2Q9P2P5 1572 aa9.42□□□□□ -0.9
TCF4-283ENST00000637115 RRS1Q15050 365 aaKnown RBP9.41□□□□□ -0.9
TCF4-283ENST00000637115 SPHKAPQ2M3C7 1700 aa9.41□□□□□ -0.9
TCF4-283ENST00000637115 FANCIQ9NVI1 1328 aa9.41□□□□□ -0.9
TCF4-283ENST00000637115 NGDNQ8NEJ9 315 aaKnown RBP9.41□□□□□ -0.9
TCF4-283ENST00000637115 NME9Q86XW9 330 aa9.41□□□□□ -0.9
TCF4-283ENST00000637115 NUTM2GQ5VZR2 741 aa9.41□□□□□ -0.9
TCF4-283ENST00000637115 PRKAR2BP31323 418 aa9.4□□□□□ -0.9
TCF4-283ENST00000637115 PNNQ9H307 717 aaKnown RBP9.4□□□□□ -0.9
TCF4-283ENST00000637115 ABCC3O15438 1527 aa9.4□□□□□ -0.9
TCF4-283ENST00000637115 PMFBP1Q8TBY8 1022 aa9.4□□□□□ -0.9
TCF4-283ENST00000637115 EXOSC9Q06265 439 aaKnown RBP9.4□□□□□ -0.9
TCF4-283ENST00000637115 ZRANB1Q9UGI0 708 aa9.4□□□□□ -0.9
TCF4-283ENST00000637115 SLC4A3P48751 1232 aa9.4□□□□□ -0.9
TCF4-283ENST00000637115 CENPQQ7L2Z9 268 aaPredicted RBP9.4□□□□□ -0.9
TCF4-283ENST00000637115 ATAD2Q6PL18 1390 aa9.4□□□□□ -0.9
TCF4-283ENST00000637115 MYOM2P54296 1465 aa9.4□□□□□ -0.91
TCF4-283ENST00000637115 EMILIN1Q9Y6C2 1016 aa9.4□□□□□ -0.91
TCF4-283ENST00000637115 PPRC1Q5VV67 1664 aaKnown RBP9.39□□□□□ -0.91
TCF4-283ENST00000637115 A0A1W2PP64 1363 aa9.39□□□□□ -0.91
TCF4-283ENST00000637115 LTV1Q96GA3 475 aaPredicted RBP9.39□□□□□ -0.91
TCF4-283ENST00000637115 IPO9Q96P70 1041 aaKnown RBP9.39□□□□□ -0.91
TCF4-283ENST00000637115 RNF17Q9BXT8 1623 aaKnown RBP9.39□□□□□ -0.91
TCF4-283ENST00000637115 PIK3C2GO75747 1445 aa9.39□□□□□ -0.91
TCF4-283ENST00000637115 BLMP54132 1417 aaPredicted RBP9.39□□□□□ -0.91
TCF4-283ENST00000637115 CEP152O94986 1710 aa9.39□□□□□ -0.91
TCF4-283ENST00000637115 FYB1O15117 783 aa9.39□□□□□ -0.91
TCF4-283ENST00000637115 THUMPD2Q9BTF0 503 aaKnown RBP9.39□□□□□ -0.91
TCF4-283ENST00000637115 NUDT16Q96DE0 195 aaKnown RBP9.39□□□□□ -0.91
TCF4-283ENST00000637115 ANKRD36BQ8N2N9 1353 aa9.38□□□□□ -0.91
TCF4-283ENST00000637115 RIMS2Q9UQ26 1411 aa9.38□□□□□ -0.91
TCF4-283ENST00000637115 KIDINS220Q9ULH0 1771 aa9.38□□□□□ -0.91
TCF4-283ENST00000637115 TNNQ9UQP3 1299 aa9.38□□□□□ -0.91
TCF4-283ENST00000637115 CFAP74Q9C0B2 1584 aa9.38□□□□□ -0.91
TCF4-283ENST00000637115 RNF123Q5XPI4 1314 aa9.38□□□□□ -0.91
TCF4-283ENST00000637115 YTHDC2Q9H6S0 1430 aaKnown RBP9.37□□□□□ -0.91
TCF4-283ENST00000637115 ABCA6Q8N139 1617 aa9.37□□□□□ -0.91
TCF4-283ENST00000637115 ZKSCAN2Q63HK3 967 aa9.37□□□□□ -0.91
TCF4-283ENST00000637115 RBM33Q96EV2 1170 aaKnown RBP9.37□□□□□ -0.91
TCF4-283ENST00000637115 MAP3K4Q9Y6R4 1608 aa9.37□□□□□ -0.91
TCF4-283ENST00000637115 UPF2Q9HAU5 1272 aaKnown RBP9.37□□□□□ -0.91
TCF4-283ENST00000637115 WASLO00401 505 aaPredicted RBP9.36□□□□□ -0.91
TCF4-283ENST00000637115 KDM5AP29375 1690 aaKnown RBP9.36□□□□□ -0.91
TCF4-283ENST00000637115 NKTRP30414 1462 aaKnown RBP9.36□□□□□ -0.91
TCF4-283ENST00000637115 TSPOAP1O95153 1857 aa9.36□□□□□ -0.91
TCF4-283ENST00000637115 TMPOP42166 694 aaKnown RBP9.36□□□□□ -0.91
TCF4-283ENST00000637115 POLR3AO14802 1390 aaPredicted RBP9.36□□□□□ -0.91
TCF4-283ENST00000637115 SYNMO15061 1565 aa9.35□□□□□ -0.91
TCF4-283ENST00000637115 ZMYM4Q5VZL5 1548 aa9.35□□□□□ -0.91
TCF4-283ENST00000637115 NGEFQ8N5V2 710 aa9.35□□□□□ -0.91
TCF4-283ENST00000637115 ZMYM3Q14202 1370 aa9.35□□□□□ -0.91
TCF4-283ENST00000637115 POLR1AO95602 1720 aaPredicted RBP9.35□□□□□ -0.91
TCF4-283ENST00000637115 AMPHP49418 695 aa9.35□□□□□ -0.91
TCF4-283ENST00000637115 DZIP1LQ8IYY4 767 aaKnown RBP9.35□□□□□ -0.91
TCF4-283ENST00000637115 RWDD1Q9H446 243 aaPredicted RBP9.35□□□□□ -0.91
TCF4-283ENST00000637115 KIF1BO60333 1816 aa9.35□□□□□ -0.91
TCF4-283ENST00000637115 APBB1O00213 710 aa9.35□□□□□ -0.91
TCF4-283ENST00000637115 DDRGK1Q96HY6 314 aa9.35□□□□□ -0.91
TCF4-283ENST00000637115 NPC1L1Q9UHC9 1359 aa9.34□□□□□ -0.91
TCF4-283ENST00000637115 RARSP54136 660 aaKnown RBP9.34□□□□□ -0.91
TCF4-283ENST00000637115 WDR63Q8IWG1 891 aa9.34□□□□□ -0.91
TCF4-283ENST00000637115 TNRQ92752 1358 aa9.34□□□□□ -0.91
TCF4-283ENST00000637115 ADGRB3O60242 1522 aa9.34□□□□□ -0.91
TCF4-283ENST00000637115 FRMPD1Q5SYB0 1578 aa9.34□□□□□ -0.91
TCF4-283ENST00000637115 MS4A1P11836 297 aa9.34□□□□□ -0.91
TCF4-283ENST00000637115 IPO8O15397 1037 aaKnown RBP9.33□□□□□ -0.92
TCF4-283ENST00000637115 SPRYD3Q8NCJ5 442 aa9.33□□□□□ -0.92
TCF4-283ENST00000637115 DCTN1Q14203 1278 aa9.33□□□□□ -0.92
TCF4-283ENST00000637115 CCDC61Q9Y6R9 512 aa9.33□□□□□ -0.92
TCF4-283ENST00000637115 MROH1Q8NDA8 1641 aa9.33□□□□□ -0.92
TCF4-283ENST00000637115 FAM161AQ3B820 660 aa9.33□□□□□ -0.92
TCF4-283ENST00000637115 NOB1Q9ULX3 412 aaKnown RBP9.33□□□□□ -0.92
TCF4-283ENST00000637115 RTF1Q92541 710 aaKnown RBP9.33□□□□□ -0.92
TCF4-283ENST00000637115 PPP6R1Q9UPN7 881 aa9.32□□□□□ -0.92
TCF4-283ENST00000637115 DIP2CQ9Y2E4 1556 aa9.32□□□□□ -0.92
TCF4-283ENST00000637115 BACH2Q9BYV9 841 aa9.32□□□□□ -0.92
TCF4-283ENST00000637115 VWDEQ8N2E2 1590 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms