RNA–Protein interactions for RNA: ENST00000627515.2

ACAA1-220, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 5 BASIC

Gene ACAA1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-220ENST00000627515 CABP2Q9NPB3 220 aa33.55■■■□□ 2.96
ACAA1-220ENST00000627515 TMEM2Q9UHN6 1383 aa33.55■■■□□ 2.96
ACAA1-220ENST00000627515 NINLQ9Y2I6 1382 aa33.54■■■□□ 2.96
ACAA1-220ENST00000627515 MINK1Q8N4C8 1332 aaPredicted RBP33.53■■■□□ 2.96
ACAA1-220ENST00000627515 ANKRD36BQ8N2N9 1353 aa33.53■■■□□ 2.96
ACAA1-220ENST00000627515 KNDC1Q76NI1 1749 aa33.51■■■□□ 2.95
ACAA1-220ENST00000627515 SENP3-EIF4A1A0A087X0R7 540 aa33.5■■■□□ 2.95
ACAA1-220ENST00000627515 SRPK2P78362 688 aaKnown RBP33.5■■■□□ 2.95
ACAA1-220ENST00000627515 ATAD2Q6PL18 1390 aa33.5■■■□□ 2.95
ACAA1-220ENST00000627515 ABCC11Q96J66 1382 aa33.5■■■□□ 2.95
ACAA1-220ENST00000627515 CEBPAP49715 358 aaPredicted RBP33.5■■■□□ 2.95
ACAA1-220ENST00000627515 NUDCQ9Y266 331 aa33.48■■■□□ 2.95
ACAA1-220ENST00000627515 METP08581 1390 aa33.46■■■□□ 2.95
ACAA1-220ENST00000627515 CGNL1Q0VF96 1302 aa33.46■■■□□ 2.95
ACAA1-220ENST00000627515 WDR43Q15061 677 aaKnown RBP eCLIP33.45■■■□□ 2.95
ACAA1-220ENST00000627515 BCANQ96GW7 911 aa33.44■■■□□ 2.94
ACAA1-220ENST00000627515 ADAMTS8Q9UP79 889 aa33.42■■■□□ 2.94
ACAA1-220ENST00000627515 NSD2O96028 1365 aa33.41■■■□□ 2.94
ACAA1-220ENST00000627515 PLEKHH1Q9ULM0 1364 aa33.41■■■□□ 2.94
ACAA1-220ENST00000627515 MORC1Q86VD1 984 aa33.4■■■□□ 2.94
ACAA1-220ENST00000627515 A0A1W2PP64 1363 aa33.4■■■□□ 2.94
ACAA1-220ENST00000627515 CPS1P31327 1500 aa33.4■■■□□ 2.94
ACAA1-220ENST00000627515 WAPLQ7Z5K2 1190 aa33.39■■■□□ 2.94
ACAA1-220ENST00000627515 TECPR2O15040 1411 aa33.39■■■□□ 2.94
ACAA1-220ENST00000627515 CDK19Q9BWU1 502 aa33.39■■■□□ 2.94
ACAA1-220ENST00000627515 PLEKHG1Q9ULL1 1385 aa33.37■■■□□ 2.93
ACAA1-220ENST00000627515 SLIT1O75093 1534 aa33.36■■■□□ 2.93
ACAA1-220ENST00000627515 FAM135BQ49AJ0 1406 aa33.35■■■□□ 2.93
ACAA1-220ENST00000627515 ADAMTS13Q76LX8 1427 aa33.35■■■□□ 2.93
ACAA1-220ENST00000627515 SALL2Q9Y467 1007 aaPredicted RBP33.35■■■□□ 2.93
ACAA1-220ENST00000627515 CD163L1Q9NR16 1453 aa33.35■■■□□ 2.93
ACAA1-220ENST00000627515 PDE3BQ13370 1112 aa33.34■■■□□ 2.93
ACAA1-220ENST00000627515 TERF2IPQ9NYB0 399 aa33.34■■■□□ 2.93
ACAA1-220ENST00000627515 POLR3AO14802 1390 aaPredicted RBP33.34■■■□□ 2.93
ACAA1-220ENST00000627515 ARHGAP23Q9P227 1491 aa33.33■■■□□ 2.93
ACAA1-220ENST00000627515 PLPPR3Q6T4P5 718 aa33.33■■■□□ 2.93
ACAA1-220ENST00000627515 ANKRD26Q9UPS8 1709 aa33.33■■■□□ 2.93
ACAA1-220ENST00000627515 LTKP29376 864 aa33.32■■■□□ 2.92
ACAA1-220ENST00000627515 IRX6P78412 446 aaPredicted RBP33.31■■■□□ 2.92
ACAA1-220ENST00000627515 SIRT1Q96EB6 747 aa33.31■■■□□ 2.92
ACAA1-220ENST00000627515 RIMS1Q86UR5 1692 aaKnown RBP33.3■■■□□ 2.92
ACAA1-220ENST00000627515 TXNDC2Q86VQ3 553 aa33.3■■■□□ 2.92
ACAA1-220ENST00000627515 EID1Q9Y6B2 187 aa33.29■■■□□ 2.92
ACAA1-220ENST00000627515 PELP1Q8IZL8 1130 aaKnown RBP33.29■■■□□ 2.92
ACAA1-220ENST00000627515 SHPRHQ149N8 1683 aa33.28■■■□□ 2.92
ACAA1-220ENST00000627515 TNNT2P45379 298 aaPredicted RBP33.27■■■□□ 2.92
ACAA1-220ENST00000627515 ERICH6BQ5W0A0 696 aa33.27■■■□□ 2.92
ACAA1-220ENST00000627515 DNAJC5Q9H3Z4 198 aa33.27■■■□□ 2.92
ACAA1-220ENST00000627515 KIF20BQ96Q89 1820 aa33.27■■■□□ 2.92
ACAA1-220ENST00000627515 HDGFL2Q7Z4V5 671 aaPredicted RBP33.26■■■□□ 2.91
ACAA1-220ENST00000627515 MED14O60244 1454 aa33.26■■■□□ 2.91
ACAA1-220ENST00000627515 ATP7BP35670 1465 aa33.25■■■□□ 2.91
ACAA1-220ENST00000627515 CABP1Q9NZU7 370 aa33.24■■■□□ 2.91
ACAA1-220ENST00000627515 WASLO00401 505 aaPredicted RBP33.23■■■□□ 2.91
ACAA1-220ENST00000627515 THEMISQ8N1K5 641 aaPredicted RBP33.22■■■□□ 2.91
ACAA1-220ENST00000627515 RNF123Q5XPI4 1314 aa33.21■■■□□ 2.91
ACAA1-220ENST00000627515 CEP170BQ9Y4F5 1589 aaPredicted RBP33.2■■■□□ 2.91
ACAA1-220ENST00000627515 ROBO2Q9HCK4 1378 aa33.2■■■□□ 2.91
ACAA1-220ENST00000627515 DIP2AQ14689 1571 aa33.18■■■□□ 2.9
ACAA1-220ENST00000627515 ADGRB2O60241 1585 aa33.18■■■□□ 2.9
ACAA1-220ENST00000627515 ADAMTSL3P82987 1691 aa33.17■■■□□ 2.9
ACAA1-220ENST00000627515 MTHFSP49914 203 aa33.16■■■□□ 2.9
ACAA1-220ENST00000627515 CDCA7LQ96GN5 454 aa33.16■■■□□ 2.9
ACAA1-220ENST00000627515 CCDC146Q8IYE0 955 aa33.15■■■□□ 2.9
ACAA1-220ENST00000627515 CFAP53Q96M91 514 aa33.15■■■□□ 2.9
ACAA1-220ENST00000627515 GGNBP2Q9H3C7 697 aa33.15■■■□□ 2.9
ACAA1-220ENST00000627515 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.15■■■□□ 2.9
ACAA1-220ENST00000627515 PPIP5K1Q6PFW1 1433 aa33.15■■■□□ 2.9
ACAA1-220ENST00000627515 FYB1O15117 783 aa33.14■■■□□ 2.9
ACAA1-220ENST00000627515 SLC26A8Q96RN1 970 aa33.14■■■□□ 2.9
ACAA1-220ENST00000627515 PTPRUQ92729 1446 aa33.13■■■□□ 2.89
ACAA1-220ENST00000627515 CDC42BPGQ6DT37 1551 aa33.11■■■□□ 2.89
ACAA1-220ENST00000627515 ITSN1Q15811 1721 aa33.11■■■□□ 2.89
ACAA1-220ENST00000627515 ZNF142P52746 1687 aaPredicted RBP33.11■■■□□ 2.89
ACAA1-220ENST00000627515 ZNF521Q96K83 1311 aa33.1■■■□□ 2.89
ACAA1-220ENST00000627515 TBX22Q9Y458 520 aa33.1■■■□□ 2.89
ACAA1-220ENST00000627515 CPSF1Q10570 1443 aaKnown RBP33.1■■■□□ 2.89
ACAA1-220ENST00000627515 MON2Q7Z3U7 1717 aa33.1■■■□□ 2.89
ACAA1-220ENST00000627515 AKAP12Q02952 1782 aa33.09■■■□□ 2.89
ACAA1-220ENST00000627515 NUDT16Q96DE0 195 aaKnown RBP33.09■■■□□ 2.89
ACAA1-220ENST00000627515 RCAN3Q9UKA8 241 aa33.08■■■□□ 2.89
ACAA1-220ENST00000627515 PPP4R2Q9NY27 417 aa33.08■■■□□ 2.89
ACAA1-220ENST00000627515 APAF1O14727 1248 aa33.07■■■□□ 2.88
ACAA1-220ENST00000627515 EDC4Q6P2E9 1401 aaKnown RBP33.06■■■□□ 2.88
ACAA1-220ENST00000627515 PTCH1Q13635 1447 aa33.06■■■□□ 2.88
ACAA1-220ENST00000627515 CCDC61Q9Y6R9 512 aa33.05■■■□□ 2.88
ACAA1-220ENST00000627515 NGEFQ8N5V2 710 aa33.05■■■□□ 2.88
ACAA1-220ENST00000627515 TOPAZ1Q8N9V7 1692 aa33.04■■■□□ 2.88
ACAA1-220ENST00000627515 XRN1Q8IZH2 1706 aaKnown RBP33.03■■■□□ 2.88
ACAA1-220ENST00000627515 AMOTL2Q9Y2J4 779 aa33.02■■■□□ 2.88
ACAA1-220ENST00000627515 SETD1BQ9UPS6 1966 aaKnown RBP33.02■■■□□ 2.88
ACAA1-220ENST00000627515 GOLGA2Q08379 1002 aa33.01■■■□□ 2.88
ACAA1-220ENST00000627515 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.01■■■□□ 2.88
ACAA1-220ENST00000627515 COL3A1P02461 1466 aaPredicted RBP33■■■□□ 2.87
ACAA1-220ENST00000627515 PRR36Q9H6K5 1346 aa33■■■□□ 2.87
ACAA1-220ENST00000627515 RRP1P56182 461 aaKnown RBP32.99■■■□□ 2.87
ACAA1-220ENST00000627515 NCKAP5LQ9HCH0 1330 aa32.98■■■□□ 2.87
ACAA1-220ENST00000627515 IQSEC2Q5JU85 1478 aa32.98■■■□□ 2.87
ACAA1-220ENST00000627515 RUNDC1Q96C34 613 aa32.97■■■□□ 2.87
ACAA1-220ENST00000627515 DUSP27Q5VZP5 1158 aa32.95■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms