RNA–Protein interactions for RNA: ENST00000625681.2

UBE3A-208, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-208	ENST00000625681	ATRN	O75882	1429 aa		34.09	■■■■□ 3.05
UBE3A-208	ENST00000625681	NUTM2F	A1L443	756 aa		34.08	■■■■□ 3.05
UBE3A-208	ENST00000625681	SLC4A1AP	Q9BWU0	796 aa	Known RBP	34.08	■■■■□ 3.05
UBE3A-208	ENST00000625681	KIF1B	O60333	1816 aa		34.07	■■■■□ 3.04
UBE3A-208	ENST00000625681	NPHP3	Q7Z494	1330 aa		34.06	■■■■□ 3.04
UBE3A-208	ENST00000625681	STK26	Q9P289	416 aa		34.05	■■■■□ 3.04
UBE3A-208	ENST00000625681	EP400	Q96L91	3159 aa		34.04	■■■■□ 3.04
UBE3A-208	ENST00000625681	FOXD1	Q16676	465 aa		34.04	■■■■□ 3.04
UBE3A-208	ENST00000625681	WAPL	Q7Z5K2	1190 aa		34.04	■■■■□ 3.04
UBE3A-208	ENST00000625681	ZRANB1	Q9UGI0	708 aa		34.04	■■■■□ 3.04
UBE3A-208	ENST00000625681	PRAG1	Q86YV5	1406 aa		34.04	■■■■□ 3.04
UBE3A-208	ENST00000625681	BCL9L	Q86UU0	1499 aa		34.03	■■■■□ 3.04
UBE3A-208	ENST00000625681	MYOM2	P54296	1465 aa		34.02	■■■■□ 3.04
UBE3A-208	ENST00000625681	GJD4	Q96KN9	370 aa	Predicted RBP	34	■■■■□ 3.03
UBE3A-208	ENST00000625681	ADGRF5	Q8IZF2	1346 aa		34	■■■■□ 3.03
UBE3A-208	ENST00000625681	RRBP1	Q9P2E9	1410 aa	Known RBP	33.99	■■■■□ 3.03
UBE3A-208	ENST00000625681	RGL3	Q3MIN7	710 aa		33.98	■■■■□ 3.03
UBE3A-208	ENST00000625681	PXDN	Q92626	1479 aa		33.98	■■■■□ 3.03
UBE3A-208	ENST00000625681	COL22A1	Q8NFW1	1626 aa	Predicted RBP	33.97	■■■■□ 3.03
UBE3A-208	ENST00000625681	TMEM132E	Q6IEE7	984 aa		33.94	■■■■□ 3.02
UBE3A-208	ENST00000625681	CCDC125	Q86Z20	511 aa		33.93	■■■■□ 3.02
UBE3A-208	ENST00000625681	LRPPRC	P42704	1394 aa	Known RBP	33.91	■■■■□ 3.02
UBE3A-208	ENST00000625681	PLEKHH1	Q9ULM0	1364 aa		33.91	■■■■□ 3.02
UBE3A-208	ENST00000625681	CDC42BPG	Q6DT37	1551 aa		33.89	■■■■□ 3.02
UBE3A-208	ENST00000625681	UNC5CL	Q8IV45	518 aa		33.89	■■■■□ 3.02
UBE3A-208	ENST00000625681	PPL	O60437	1756 aa		33.87	■■■■□ 3.01
UBE3A-208	ENST00000625681	SPATA31A3	Q5VYP0	1347 aa		33.85	■■■■□ 3.01
UBE3A-208	ENST00000625681	PLEKHG5	O94827	1062 aa		33.85	■■■■□ 3.01
UBE3A-208	ENST00000625681	KRT28	Q7Z3Y7	464 aa		33.85	■■■■□ 3.01
UBE3A-208	ENST00000625681	ABCC11	Q96J66	1382 aa		33.83	■■■■□ 3.01
UBE3A-208	ENST00000625681	RALGAPB	Q86X10	1494 aa		33.82	■■■■□ 3
UBE3A-208	ENST00000625681	TECPR2	O15040	1411 aa		33.81	■■■■□ 3
UBE3A-208	ENST00000625681	CABLES1	Q8TDN4	633 aa		33.8	■■■■□ 3
UBE3A-208	ENST00000625681	CCDC144A	A2RUR9	1427 aa		33.79	■■■■□ 3
UBE3A-208	ENST00000625681	DEFB132	Q7Z7B7	95 aa		33.79	■■■■□ 3
UBE3A-208	ENST00000625681	SLIT2	O94813	1529 aa		33.79	■■■■□ 3
UBE3A-208	ENST00000625681	SPATA31E1	Q6ZUB1	1445 aa		33.78	■■■■□ 3
UBE3A-208	ENST00000625681	ANKRD30B	Q9BXX2	1392 aa		33.76	■■■■□ 3
UBE3A-208	ENST00000625681	HAP1	P54257	671 aa	Predicted RBP	33.76	■■■□□ 2.99
UBE3A-208	ENST00000625681	SEPT12	Q8IYM1	358 aa		33.75	■■■□□ 2.99
UBE3A-208	ENST00000625681	GLI3	P10071	1580 aa		33.74	■■■□□ 2.99
UBE3A-208	ENST00000625681	MPHOSPH9	Q99550	1183 aa		33.74	■■■□□ 2.99
UBE3A-208	ENST00000625681	BLM	P54132	1417 aa	Predicted RBP	33.73	■■■□□ 2.99
UBE3A-208	ENST00000625681	PHF8	Q9UPP1	1060 aa		33.73	■■■□□ 2.99
UBE3A-208	ENST00000625681	MARF1	Q9Y4F3	1742 aa	Known RBP	33.73	■■■□□ 2.99
UBE3A-208	ENST00000625681	YTHDC2	Q9H6S0	1430 aa	Known RBP	33.72	■■■□□ 2.99
UBE3A-208	ENST00000625681	LMOD2	Q6P5Q4	547 aa		33.71	■■■□□ 2.99
UBE3A-208	ENST00000625681	CCDC9	Q9Y3X0	531 aa	Known RBP	33.7	■■■□□ 2.99
UBE3A-208	ENST00000625681	PIK3C2G	O75747	1445 aa		33.7	■■■□□ 2.98
UBE3A-208	ENST00000625681	PSME1	Q06323	249 aa		33.69	■■■□□ 2.98
UBE3A-208	ENST00000625681	SAFB2	Q14151	953 aa	Known RBP eCLIP	33.69	■■■□□ 2.98
UBE3A-208	ENST00000625681	VPS72	Q15906	364 aa		33.69	■■■□□ 2.98
UBE3A-208	ENST00000625681	SF3B2	Q13435	895 aa	Known RBP	33.67	■■■□□ 2.98
UBE3A-208	ENST00000625681	SIRT1	Q96EB6	747 aa		33.67	■■■□□ 2.98
UBE3A-208	ENST00000625681	C14orf93	Q9H972	538 aa	Known RBP	33.66	■■■□□ 2.98
UBE3A-208	ENST00000625681	CFAP70	Q5T0N1	1121 aa		33.65	■■■□□ 2.98
UBE3A-208	ENST00000625681	TNS3	Q68CZ2	1445 aa		33.64	■■■□□ 2.98
UBE3A-208	ENST00000625681	FMN2	Q9NZ56	1722 aa		33.64	■■■□□ 2.98
UBE3A-208	ENST00000625681	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	33.63	■■■□□ 2.97
UBE3A-208	ENST00000625681	FAM83G	A6ND36	823 aa		33.63	■■■□□ 2.97
UBE3A-208	ENST00000625681	ONECUT3	O60422	494 aa	Predicted RBP	33.63	■■■□□ 2.97
UBE3A-208	ENST00000625681	USP32	Q8NFA0	1604 aa		33.62	■■■□□ 2.97
UBE3A-208	ENST00000625681	KRT27	Q7Z3Y8	459 aa		33.62	■■■□□ 2.97
UBE3A-208	ENST00000625681	PMFBP1	Q8TBY8	1022 aa		33.62	■■■□□ 2.97
UBE3A-208	ENST00000625681	PRAM1	Q96QH2	718 aa		33.62	■■■□□ 2.97
UBE3A-208	ENST00000625681	KIF1A	Q12756	1690 aa		33.58	■■■□□ 2.97
UBE3A-208	ENST00000625681	KNDC1	Q76NI1	1749 aa		33.57	■■■□□ 2.96
UBE3A-208	ENST00000625681		A0A0G2JS52	829 aa		33.57	■■■□□ 2.96
UBE3A-208	ENST00000625681	MYT1	Q01538	1121 aa		33.57	■■■□□ 2.96
UBE3A-208	ENST00000625681	SBNO1	A3KN83	1393 aa		33.57	■■■□□ 2.96
UBE3A-208	ENST00000625681	DHX57	Q6P158	1386 aa	Known RBP	33.57	■■■□□ 2.96
UBE3A-208	ENST00000625681	IFT172	Q9UG01	1749 aa		33.55	■■■□□ 2.96
UBE3A-208	ENST00000625681	BRWD3	Q6RI45	1802 aa		33.54	■■■□□ 2.96
UBE3A-208	ENST00000625681	NRXN1	Q9ULB1	1477 aa		33.53	■■■□□ 2.96
UBE3A-208	ENST00000625681	FAM98C	Q17RN3	349 aa	Known RBP	33.53	■■■□□ 2.96
UBE3A-208	ENST00000625681	POGK	Q9P215	609 aa		33.53	■■■□□ 2.96
UBE3A-208	ENST00000625681	ARHGEF10	O15013	1369 aa		33.52	■■■□□ 2.96
UBE3A-208	ENST00000625681	PSD	A5PKW4	1024 aa	Predicted RBP	33.52	■■■□□ 2.96
UBE3A-208	ENST00000625681	BTG4	Q9NY30	223 aa		33.51	■■■□□ 2.95
UBE3A-208	ENST00000625681	HIRIP3	Q9BW71	556 aa	Predicted RBP	33.49	■■■□□ 2.95
UBE3A-208	ENST00000625681	RGPD8	O14715	1765 aa	Predicted RBP	33.49	■■■□□ 2.95
UBE3A-208	ENST00000625681	FAM182B	Q5T319	152 aa		33.47	■■■□□ 2.95
UBE3A-208	ENST00000625681	BAG6	P46379	1132 aa		33.46	■■■□□ 2.95
UBE3A-208	ENST00000625681	PLCH1	Q4KWH8	1693 aa		33.45	■■■□□ 2.94
UBE3A-208	ENST00000625681	TRAK1	Q9UPV9	953 aa		33.43	■■■□□ 2.94
UBE3A-208	ENST00000625681	EN1	Q05925	392 aa	Predicted RBP	33.42	■■■□□ 2.94
UBE3A-208	ENST00000625681	HRC	P23327	699 aa		33.41	■■■□□ 2.94
UBE3A-208	ENST00000625681	MINK1	Q8N4C8	1332 aa	Predicted RBP	33.4	■■■□□ 2.94
UBE3A-208	ENST00000625681	NWD2	Q9ULI1	1742 aa		33.39	■■■□□ 2.94
UBE3A-208	ENST00000625681	ANKAR	Q7Z5J8	1434 aa		33.39	■■■□□ 2.94
UBE3A-208	ENST00000625681	PRR36	Q9H6K5	1346 aa		33.39	■■■□□ 2.94
UBE3A-208	ENST00000625681	GPRASP1	Q5JY77	1395 aa		33.36	■■■□□ 2.93
UBE3A-208	ENST00000625681	ACIN1	Q9UKV3	1341 aa	Known RBP	33.36	■■■□□ 2.93
UBE3A-208	ENST00000625681	ABCA3	Q99758	1704 aa		33.36	■■■□□ 2.93
UBE3A-208	ENST00000625681	PAK3	O75914	559 aa	Predicted RBP	33.35	■■■□□ 2.93
UBE3A-208	ENST00000625681	SPATA31A5	Q5VU36	1347 aa		33.33	■■■□□ 2.93
UBE3A-208	ENST00000625681	SPATA31A7	Q8IWB4	1347 aa		33.33	■■■□□ 2.93
UBE3A-208	ENST00000625681	NGDN	Q8NEJ9	315 aa	Known RBP	33.33	■■■□□ 2.93
UBE3A-208	ENST00000625681	KDM2A	Q9Y2K7	1162 aa		33.33	■■■□□ 2.93
UBE3A-208	ENST00000625681	DLC1	Q96QB1	1528 aa		33.32	■■■□□ 2.92

Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms