RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 CDCA7LQ96GN5 454 aa26.19■■□□□ 1.78
PCDHB11-202ENST00000624887 ANKRD36BQ8N2N9 1353 aa26.18■■□□□ 1.78
PCDHB11-202ENST00000624887 RCAN3Q9UKA8 241 aa26.18■■□□□ 1.78
PCDHB11-202ENST00000624887 RIMS2Q9UQ26 1411 aa26.16■■□□□ 1.78
PCDHB11-202ENST00000624887 POLR3AO14802 1390 aaPredicted RBP26.16■■□□□ 1.78
PCDHB11-202ENST00000624887 NINLQ9Y2I6 1382 aa26.16■■□□□ 1.78
PCDHB11-202ENST00000624887 SAFB2Q14151 953 aaKnown RBP eCLIP26.15■■□□□ 1.78
PCDHB11-202ENST00000624887 SENP3Q9H4L4 574 aaPredicted RBP26.15■■□□□ 1.78
PCDHB11-202ENST00000624887 CABP2Q9NPB3 220 aa26.15■■□□□ 1.78
PCDHB11-202ENST00000624887 CGNL1Q0VF96 1302 aa26.15■■□□□ 1.78
PCDHB11-202ENST00000624887 B4GALNT3Q6L9W6 998 aa26.15■■□□□ 1.78
PCDHB11-202ENST00000624887 MORC1Q86VD1 984 aa26.15■■□□□ 1.78
PCDHB11-202ENST00000624887 TNRQ92752 1358 aa26.14■■□□□ 1.78
PCDHB11-202ENST00000624887 RRP1P56182 461 aaKnown RBP26.13■■□□□ 1.77
PCDHB11-202ENST00000624887 PRAM1Q96QH2 718 aa26.13■■□□□ 1.77
PCDHB11-202ENST00000624887 PLEKHH1Q9ULM0 1364 aa26.13■■□□□ 1.77
PCDHB11-202ENST00000624887 ZNF521Q96K83 1311 aa26.12■■□□□ 1.77
PCDHB11-202ENST00000624887 POGKQ9P215 609 aa26.11■■□□□ 1.77
PCDHB11-202ENST00000624887 NSD2O96028 1365 aa26.11■■□□□ 1.77
PCDHB11-202ENST00000624887 SETD1AO15047 1707 aaKnown RBP26.11■■□□□ 1.77
PCDHB11-202ENST00000624887 ATAD2Q6PL18 1390 aa26.1■■□□□ 1.77
PCDHB11-202ENST00000624887 DLC1Q96QB1 1528 aa26.09■■□□□ 1.77
PCDHB11-202ENST00000624887 SRPK2P78362 688 aaKnown RBP26.09■■□□□ 1.77
PCDHB11-202ENST00000624887 FER1L4A9Z1Z3 1794 aa26.07■■□□□ 1.76
PCDHB11-202ENST00000624887 MINK1Q8N4C8 1332 aaPredicted RBP26.07■■□□□ 1.76
PCDHB11-202ENST00000624887 CEBPAP49715 358 aaPredicted RBP26.06■■□□□ 1.76
PCDHB11-202ENST00000624887 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.06■■□□□ 1.76
PCDHB11-202ENST00000624887 A0A1W2PP64 1363 aa26.05■■□□□ 1.76
PCDHB11-202ENST00000624887 SHPRHQ149N8 1683 aa26.05■■□□□ 1.76
PCDHB11-202ENST00000624887 CCDC146Q8IYE0 955 aa26.04■■□□□ 1.76
PCDHB11-202ENST00000624887 NRXN3Q9Y4C0 1643 aa26.04■■□□□ 1.76
PCDHB11-202ENST00000624887 ABCC11Q96J66 1382 aa26.04■■□□□ 1.76
PCDHB11-202ENST00000624887 C3P01024 1663 aa26.03■■□□□ 1.76
PCDHB11-202ENST00000624887 GOLGA2Q08379 1002 aa26.03■■□□□ 1.76
PCDHB11-202ENST00000624887 NGEFQ8N5V2 710 aa26.03■■□□□ 1.76
PCDHB11-202ENST00000624887 TNNT2P45379 298 aaPredicted RBP26.02■■□□□ 1.76
PCDHB11-202ENST00000624887 APAF1O14727 1248 aa26.01■■□□□ 1.75
PCDHB11-202ENST00000624887 DUSP27Q5VZP5 1158 aa26.01■■□□□ 1.75
PCDHB11-202ENST00000624887 NLRP1Q9C000 1473 aa26.01■■□□□ 1.75
PCDHB11-202ENST00000624887 CCDC136Q96JN2 1154 aa26■■□□□ 1.75
PCDHB11-202ENST00000624887 CD163L1Q9NR16 1453 aa26■■□□□ 1.75
PCDHB11-202ENST00000624887 TERF2IPQ9NYB0 399 aa26■■□□□ 1.75
PCDHB11-202ENST00000624887 CDK19Q9BWU1 502 aa25.99■■□□□ 1.75
PCDHB11-202ENST00000624887 RBM19Q9Y4C8 960 aaKnown RBP25.99■■□□□ 1.75
PCDHB11-202ENST00000624887 MTHFSP49914 203 aa25.98■■□□□ 1.75
PCDHB11-202ENST00000624887 HDGFP51858 240 aaKnown RBP25.98■■□□□ 1.75
PCDHB11-202ENST00000624887 SLFN5Q08AF3 891 aa25.97■■□□□ 1.75
PCDHB11-202ENST00000624887 UBR1Q8IWV7 1749 aa25.97■■□□□ 1.75
PCDHB11-202ENST00000624887 TRMT2AQ8IZ69 625 aaKnown RBP25.96■■□□□ 1.75
PCDHB11-202ENST00000624887 CFAP53Q96M91 514 aa25.96■■□□□ 1.75
PCDHB11-202ENST00000624887 MED14O60244 1454 aa25.95■■□□□ 1.74
PCDHB11-202ENST00000624887 ANKRD26Q9UPS8 1709 aa25.95■■□□□ 1.74
PCDHB11-202ENST00000624887 WAPLQ7Z5K2 1190 aa25.95■■□□□ 1.74
PCDHB11-202ENST00000624887 EXOC6Q8TAG9 804 aa25.94■■□□□ 1.74
PCDHB11-202ENST00000624887 METP08581 1390 aa25.94■■□□□ 1.74
PCDHB11-202ENST00000624887 TMEM2Q9UHN6 1383 aa25.94■■□□□ 1.74
PCDHB11-202ENST00000624887 PLPPR3Q6T4P5 718 aa25.93■■□□□ 1.74
PCDHB11-202ENST00000624887 HDGFL2Q7Z4V5 671 aaPredicted RBP25.92■■□□□ 1.74
PCDHB11-202ENST00000624887 KNDC1Q76NI1 1749 aa25.92■■□□□ 1.74
PCDHB11-202ENST00000624887 RUNDC1Q96C34 613 aa25.9■■□□□ 1.74
PCDHB11-202ENST00000624887 CABP1Q9NZU7 370 aa25.9■■□□□ 1.74
PCDHB11-202ENST00000624887 TECPR2O15040 1411 aa25.89■■□□□ 1.74
PCDHB11-202ENST00000624887 FYB1O15117 783 aa25.89■■□□□ 1.74
PCDHB11-202ENST00000624887 E9PSI1 815 aa25.89■■□□□ 1.73
PCDHB11-202ENST00000624887 SIRT1Q96EB6 747 aa25.89■■□□□ 1.73
PCDHB11-202ENST00000624887 ATP7BP35670 1465 aa25.88■■□□□ 1.73
PCDHB11-202ENST00000624887 PLIN1O60240 522 aa25.88■■□□□ 1.73
PCDHB11-202ENST00000624887 GGNBP2Q9H3C7 697 aa25.88■■□□□ 1.73
PCDHB11-202ENST00000624887 ADAMTSL3P82987 1691 aa25.88■■□□□ 1.73
PCDHB11-202ENST00000624887 RIMS1Q86UR5 1692 aaKnown RBP25.88■■□□□ 1.73
PCDHB11-202ENST00000624887 FAM135BQ49AJ0 1406 aa25.88■■□□□ 1.73
PCDHB11-202ENST00000624887 IQSEC2Q5JU85 1478 aa25.88■■□□□ 1.73
PCDHB11-202ENST00000624887 SPINK5Q9NQ38 1064 aaPredicted RBP25.87■■□□□ 1.73
PCDHB11-202ENST00000624887 NKTRP30414 1462 aaKnown RBP25.86■■□□□ 1.73
PCDHB11-202ENST00000624887 KIF20BQ96Q89 1820 aa25.86■■□□□ 1.73
PCDHB11-202ENST00000624887 CPS1P31327 1500 aa25.85■■□□□ 1.73
PCDHB11-202ENST00000624887 WWC1Q8IX03 1113 aa25.85■■□□□ 1.73
PCDHB11-202ENST00000624887 WASLO00401 505 aaPredicted RBP25.84■■□□□ 1.73
PCDHB11-202ENST00000624887 TXNDC2Q86VQ3 553 aa25.82■■□□□ 1.72
PCDHB11-202ENST00000624887 TCP11L2Q8N4U5 519 aa25.82■■□□□ 1.72
PCDHB11-202ENST00000624887 PHF23Q9BUL5 403 aaPredicted RBP25.82■■□□□ 1.72
PCDHB11-202ENST00000624887 DMRT2Q9Y5R5 561 aa25.82■■□□□ 1.72
PCDHB11-202ENST00000624887 NCBP3Q53F19 620 aaKnown RBP25.81■■□□□ 1.72
PCDHB11-202ENST00000624887 COL3A1P02461 1466 aaPredicted RBP25.81■■□□□ 1.72
PCDHB11-202ENST00000624887 ADAMTS13Q76LX8 1427 aa25.81■■□□□ 1.72
PCDHB11-202ENST00000624887 SLIT1O75093 1534 aa25.8■■□□□ 1.72
PCDHB11-202ENST00000624887 ARHGAP23Q9P227 1491 aa25.8■■□□□ 1.72
PCDHB11-202ENST00000624887 LTKP29376 864 aa25.8■■□□□ 1.72
PCDHB11-202ENST00000624887 THEMISQ8N1K5 641 aaPredicted RBP25.8■■□□□ 1.72
PCDHB11-202ENST00000624887 PLEKHG1Q9ULL1 1385 aa25.79■■□□□ 1.72
PCDHB11-202ENST00000624887 CRBNQ96SW2 442 aa25.79■■□□□ 1.72
PCDHB11-202ENST00000624887 U2AF1L5P0DN76 240 aaPredicted RBP25.78■■□□□ 1.72
PCDHB11-202ENST00000624887 U2AF1Q01081 240 aaKnown RBP eCLIP25.78■■□□□ 1.72
PCDHB11-202ENST00000624887 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.78■■□□□ 1.72
PCDHB11-202ENST00000624887 CPSF1Q10570 1443 aaKnown RBP25.78■■□□□ 1.72
PCDHB11-202ENST00000624887 CCDC27Q2M243 656 aa25.78■■□□□ 1.72
PCDHB11-202ENST00000624887 EID1Q9Y6B2 187 aa25.78■■□□□ 1.72
PCDHB11-202ENST00000624887 ADGRB2O60241 1585 aa25.77■■□□□ 1.72
PCDHB11-202ENST00000624887 PPIP5K1Q6PFW1 1433 aa25.77■■□□□ 1.72
PCDHB11-202ENST00000624887 C20orf194Q5TEA3 1177 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms