RNA–Protein interactions for RNA: ENST00000621453.4

FMR1-219, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 1,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-219ENST00000621453 NSD3Q9BZ95 1437 aa37.47■■■■□ 3.59
FMR1-219ENST00000621453 KNDC1Q76NI1 1749 aa37.47■■■■□ 3.59
FMR1-219ENST00000621453 SRPK2P78362 688 aaKnown RBP37.45■■■■□ 3.59
FMR1-219ENST00000621453 RIMS1Q86UR5 1692 aaKnown RBP37.45■■■■□ 3.59
FMR1-219ENST00000621453 NINLQ9Y2I6 1382 aa37.45■■■■□ 3.59
FMR1-219ENST00000621453 SLIT1O75093 1534 aa37.45■■■■□ 3.59
FMR1-219ENST00000621453 PLEKHG1Q9ULL1 1385 aa37.45■■■■□ 3.59
FMR1-219ENST00000621453 BCANQ96GW7 911 aa37.45■■■■□ 3.59
FMR1-219ENST00000621453 USP32Q8NFA0 1604 aa37.44■■■■□ 3.58
FMR1-219ENST00000621453 ANKRD36BQ8N2N9 1353 aa37.44■■■■□ 3.58
FMR1-219ENST00000621453 ATAD2Q6PL18 1390 aa37.44■■■■□ 3.58
FMR1-219ENST00000621453 LTKP29376 864 aa37.43■■■■□ 3.58
FMR1-219ENST00000621453 ARHGAP23Q9P227 1491 aa37.43■■■■□ 3.58
FMR1-219ENST00000621453 ADAMTS13Q76LX8 1427 aa37.41■■■■□ 3.58
FMR1-219ENST00000621453 WAPLQ7Z5K2 1190 aa37.4■■■■□ 3.58
FMR1-219ENST00000621453 TXNDC2Q86VQ3 553 aa37.4■■■■□ 3.58
FMR1-219ENST00000621453 TECPR2O15040 1411 aa37.4■■■■□ 3.58
FMR1-219ENST00000621453 PLEKHH1Q9ULM0 1364 aa37.4■■■■□ 3.58
FMR1-219ENST00000621453 EID1Q9Y6B2 187 aa37.39■■■■□ 3.58
FMR1-219ENST00000621453 CPS1P31327 1500 aa37.37■■■■□ 3.57
FMR1-219ENST00000621453 INSRP06213 1382 aa37.37■■■■□ 3.57
FMR1-219ENST00000621453 ADAMTSL3P82987 1691 aa37.36■■■■□ 3.57
FMR1-219ENST00000621453 THEMISQ8N1K5 641 aaPredicted RBP37.36■■■■□ 3.57
FMR1-219ENST00000621453 CDK19Q9BWU1 502 aa37.36■■■■□ 3.57
FMR1-219ENST00000621453 SIRT1Q96EB6 747 aa37.35■■■■□ 3.57
FMR1-219ENST00000621453 FAM135BQ49AJ0 1406 aa37.35■■■■□ 3.57
FMR1-219ENST00000621453 CGNL1Q0VF96 1302 aa37.32■■■■□ 3.56
FMR1-219ENST00000621453 MED14O60244 1454 aa37.31■■■■□ 3.56
FMR1-219ENST00000621453 CEP170BQ9Y4F5 1589 aaPredicted RBP37.31■■■■□ 3.56
FMR1-219ENST00000621453 A0A1W2PP64 1363 aa37.3■■■■□ 3.56
FMR1-219ENST00000621453 BLMP54132 1417 aaPredicted RBP37.27■■■■□ 3.56
FMR1-219ENST00000621453 SUPT16HQ9Y5B9 1047 aaKnown RBP37.27■■■■□ 3.56
FMR1-219ENST00000621453 NSD2O96028 1365 aa37.26■■■■□ 3.56
FMR1-219ENST00000621453 MORC1Q86VD1 984 aa37.25■■■■□ 3.55
FMR1-219ENST00000621453 CD163L1Q9NR16 1453 aa37.25■■■■□ 3.55
FMR1-219ENST00000621453 TERF2IPQ9NYB0 399 aa37.24■■■■□ 3.55
FMR1-219ENST00000621453 WASLO00401 505 aaPredicted RBP37.2■■■■□ 3.55
FMR1-219ENST00000621453 WDR43Q15061 677 aaKnown RBP eCLIP37.2■■■■□ 3.55
FMR1-219ENST00000621453 SLC26A8Q96RN1 970 aa37.2■■■■□ 3.55
FMR1-219ENST00000621453 DIP2AQ14689 1571 aa37.2■■■■□ 3.55
FMR1-219ENST00000621453 SENP3-EIF4A1A0A087X0R7 540 aa37.2■■■■□ 3.55
FMR1-219ENST00000621453 NEFLP07196 543 aa37.2■■■■□ 3.55
FMR1-219ENST00000621453 ROBO2Q9HCK4 1378 aa37.2■■■■□ 3.54
FMR1-219ENST00000621453 ADAMTS8Q9UP79 889 aa37.18■■■■□ 3.54
FMR1-219ENST00000621453 TBX22Q9Y458 520 aa37.18■■■■□ 3.54
FMR1-219ENST00000621453 SMG6Q86US8 1419 aaKnown RBP37.18■■■■□ 3.54
FMR1-219ENST00000621453 ZNF142P52746 1687 aaPredicted RBP37.18■■■■□ 3.54
FMR1-219ENST00000621453 CABP1Q9NZU7 370 aa37.18■■■■□ 3.54
FMR1-219ENST00000621453 HDGFL2Q7Z4V5 671 aaPredicted RBP37.17■■■■□ 3.54
FMR1-219ENST00000621453 PTPRUQ92729 1446 aa37.16■■■■□ 3.54
FMR1-219ENST00000621453 FKBP8Q14318 412 aa37.16■■■■□ 3.54
FMR1-219ENST00000621453 ATP7BP35670 1465 aa37.15■■■■□ 3.54
FMR1-219ENST00000621453 SETD1BQ9UPS6 1966 aaKnown RBP37.15■■■■□ 3.54
FMR1-219ENST00000621453 POLR3AO14802 1390 aaPredicted RBP37.14■■■■□ 3.54
FMR1-219ENST00000621453 NUDCQ9Y266 331 aa37.11■■■■□ 3.53
FMR1-219ENST00000621453 ADGRB2O60241 1585 aa37.11■■■■□ 3.53
FMR1-219ENST00000621453 ANKRD26Q9UPS8 1709 aa37.11■■■■□ 3.53
FMR1-219ENST00000621453 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.1■■■■□ 3.53
FMR1-219ENST00000621453 TNNT2P45379 298 aaPredicted RBP37.09■■■■□ 3.53
FMR1-219ENST00000621453 AMOTL2Q9Y2J4 779 aa37.07■■■■□ 3.52
FMR1-219ENST00000621453 PPIP5K1Q6PFW1 1433 aa37.07■■■■□ 3.52
FMR1-219ENST00000621453 KIF20BQ96Q89 1820 aa37.06■■■■□ 3.52
FMR1-219ENST00000621453 PTCH1Q13635 1447 aa37.05■■■■□ 3.52
FMR1-219ENST00000621453 NUDT16Q96DE0 195 aaKnown RBP37.05■■■■□ 3.52
FMR1-219ENST00000621453 SALL2Q9Y467 1007 aaPredicted RBP37.05■■■■□ 3.52
FMR1-219ENST00000621453 FYB1O15117 783 aa37.03■■■■□ 3.52
FMR1-219ENST00000621453 PDE3BQ13370 1112 aa37.02■■■■□ 3.52
FMR1-219ENST00000621453 GGNBP2Q9H3C7 697 aa37.02■■■■□ 3.52
FMR1-219ENST00000621453 XRN1Q8IZH2 1706 aaKnown RBP37.01■■■■□ 3.51
FMR1-219ENST00000621453 CCDC61Q9Y6R9 512 aa37.01■■■■□ 3.51
FMR1-219ENST00000621453 CPSF1Q10570 1443 aaKnown RBP37■■■■□ 3.51
FMR1-219ENST00000621453 SHPRHQ149N8 1683 aa37■■■■□ 3.51
FMR1-219ENST00000621453 MTHFSP49914 203 aa36.99■■■■□ 3.51
FMR1-219ENST00000621453 CDC42BPGQ6DT37 1551 aa36.99■■■■□ 3.51
FMR1-219ENST00000621453 ANKLE2Q86XL3 938 aa36.99■■■■□ 3.51
FMR1-219ENST00000621453 PIK3R4Q99570 1358 aa36.98■■■■□ 3.51
FMR1-219ENST00000621453 CFAP53Q96M91 514 aa36.94■■■■□ 3.5
FMR1-219ENST00000621453 PRR36Q9H6K5 1346 aa36.94■■■■□ 3.5
FMR1-219ENST00000621453 AKAP12Q02952 1782 aa36.94■■■■□ 3.5
FMR1-219ENST00000621453 EDC4Q6P2E9 1401 aaKnown RBP36.94■■■■□ 3.5
FMR1-219ENST00000621453 ITSN1Q15811 1721 aa36.94■■■■□ 3.5
FMR1-219ENST00000621453 MON2Q7Z3U7 1717 aa36.94■■■■□ 3.5
FMR1-219ENST00000621453 TOPAZ1Q8N9V7 1692 aa36.92■■■■□ 3.5
FMR1-219ENST00000621453 NCKAP5LQ9HCH0 1330 aa36.92■■■■□ 3.5
FMR1-219ENST00000621453 SUGP2Q8IX01 1082 aaKnown RBP eCLIP36.89■■■■□ 3.5
FMR1-219ENST00000621453 CCDC146Q8IYE0 955 aa36.88■■■■□ 3.49
FMR1-219ENST00000621453 CHD2O14647 1828 aaKnown RBP36.85■■■■□ 3.49
FMR1-219ENST00000621453 ZNF692Q9BU19 519 aaPredicted RBP36.85■■■■□ 3.49
FMR1-219ENST00000621453 KCNA6P17658 529 aa36.84■■■■□ 3.49
FMR1-219ENST00000621453 CDCA7LQ96GN5 454 aa36.83■■■■□ 3.49
FMR1-219ENST00000621453 IRX6P78412 446 aaPredicted RBP36.82■■■■□ 3.49
FMR1-219ENST00000621453 PLEKHG3A1L390 1219 aa36.79■■■■□ 3.48
FMR1-219ENST00000621453 APAF1O14727 1248 aa36.79■■■■□ 3.48
FMR1-219ENST00000621453 ZNF521Q96K83 1311 aa36.79■■■■□ 3.48
FMR1-219ENST00000621453 NUTM2FA1L443 756 aa36.78■■■■□ 3.48
FMR1-219ENST00000621453 RNF123Q5XPI4 1314 aa36.78■■■■□ 3.48
FMR1-219ENST00000621453 ERICH6BQ5W0A0 696 aa36.77■■■■□ 3.48
FMR1-219ENST00000621453 NGEFQ8N5V2 710 aa36.77■■■■□ 3.48
FMR1-219ENST00000621453 COL3A1P02461 1466 aaPredicted RBP36.77■■■■□ 3.48
FMR1-219ENST00000621453 NKTRP30414 1462 aaKnown RBP36.76■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms