RNA–Protein interactions for RNA: ENST00000620505.1

TARDBP-222, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 657 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-222ENST00000620505 C8orf37Q96NL8 207 aa13.13□□□□□ -0.31
TARDBP-222ENST00000620505 ORAI2Q96SN7 254 aa13.13□□□□□ -0.31
TARDBP-222ENST00000620505 C1orf167Q5SNV9 1468 aa13.12□□□□□ -0.31
TARDBP-222ENST00000620505 PNPLA6Q8IY17 1366 aa13.12□□□□□ -0.31
TARDBP-222ENST00000620505 RXRBP28702 533 aa13.12□□□□□ -0.31
TARDBP-222ENST00000620505 RPGRIP1LQ68CZ1 1315 aa13.12□□□□□ -0.31
TARDBP-222ENST00000620505 ADAMTS2O95450 1211 aa13.11□□□□□ -0.31
TARDBP-222ENST00000620505 STK26Q9P289 416 aa13.11□□□□□ -0.31
TARDBP-222ENST00000620505 PTCH1Q13635 1447 aa13.1□□□□□ -0.31
TARDBP-222ENST00000620505 ADGRF5Q8IZF2 1346 aa13.1□□□□□ -0.31
TARDBP-222ENST00000620505 PPLO60437 1756 aa13.09□□□□□ -0.31
TARDBP-222ENST00000620505 UPF1Q92900 1129 aaKnown RBP eCLIP13.09□□□□□ -0.31
TARDBP-222ENST00000620505 NUTM2FA1L443 756 aa13.08□□□□□ -0.32
TARDBP-222ENST00000620505 MPHOSPH9Q99550 1183 aa13.08□□□□□ -0.32
TARDBP-222ENST00000620505 CCDC144AA2RUR9 1427 aa13.07□□□□□ -0.32
TARDBP-222ENST00000620505 TMEM132EQ6IEE7 984 aa13.07□□□□□ -0.32
TARDBP-222ENST00000620505 NGLY1Q96IV0 654 aa13.07□□□□□ -0.32
TARDBP-222ENST00000620505 QTRT2Q9H974 415 aaKnown RBP13.07□□□□□ -0.32
TARDBP-222ENST00000620505 NPM3O75607 178 aaKnown RBP13.06□□□□□ -0.32
TARDBP-222ENST00000620505 XPCQ01831 940 aaPredicted RBP13.06□□□□□ -0.32
TARDBP-222ENST00000620505 ESCO1Q5FWF5 840 aa13.06□□□□□ -0.32
TARDBP-222ENST00000620505 WAPLQ7Z5K2 1190 aa13.06□□□□□ -0.32
TARDBP-222ENST00000620505 SOS2Q07890 1332 aaPredicted RBP13.06□□□□□ -0.32
TARDBP-222ENST00000620505 PLEKHH1Q9ULM0 1364 aa13.04□□□□□ -0.32
TARDBP-222ENST00000620505 SPATA31E1Q6ZUB1 1445 aa13.04□□□□□ -0.32
TARDBP-222ENST00000620505 FOXO3O43524 673 aa13.03□□□□□ -0.32
TARDBP-222ENST00000620505 RBM6P78332 1123 aaKnown RBP13.03□□□□□ -0.32
TARDBP-222ENST00000620505 RGS12O14924 1447 aa13.03□□□□□ -0.32
TARDBP-222ENST00000620505 PRAG1Q86YV5 1406 aa13.03□□□□□ -0.32
TARDBP-222ENST00000620505 USP21Q9UK80 565 aa13.02□□□□□ -0.33
TARDBP-222ENST00000620505 LAMC1P11047 1609 aa13.02□□□□□ -0.33
TARDBP-222ENST00000620505 LRPPRCP42704 1394 aaKnown RBP13.01□□□□□ -0.33
TARDBP-222ENST00000620505 ANKRD30BQ9BXX2 1392 aa13.01□□□□□ -0.33
TARDBP-222ENST00000620505 CDK12Q9NYV4 1490 aaPredicted RBP13.01□□□□□ -0.33
TARDBP-222ENST00000620505 CDC42BPGQ6DT37 1551 aa13.01□□□□□ -0.33
TARDBP-222ENST00000620505 IFT172Q9UG01 1749 aa13□□□□□ -0.33
TARDBP-222ENST00000620505 NPHP3Q7Z494 1330 aa13□□□□□ -0.33
TARDBP-222ENST00000620505 PIK3C2GO75747 1445 aa12.99□□□□□ -0.33
TARDBP-222ENST00000620505 PLEKHG5O94827 1062 aa12.99□□□□□ -0.33
TARDBP-222ENST00000620505 PXDNQ92626 1479 aa12.98□□□□□ -0.33
TARDBP-222ENST00000620505 YTHDC2Q9H6S0 1430 aaKnown RBP12.98□□□□□ -0.33
TARDBP-222ENST00000620505 SAFB2Q14151 953 aaKnown RBP eCLIP12.98□□□□□ -0.33
TARDBP-222ENST00000620505 CFAP70Q5T0N1 1121 aa12.98□□□□□ -0.33
TARDBP-222ENST00000620505 TECPR2O15040 1411 aa12.97□□□□□ -0.33
TARDBP-222ENST00000620505 ABCC11Q96J66 1382 aa12.97□□□□□ -0.33
TARDBP-222ENST00000620505 TRPC5Q9UL62 973 aaPredicted RBP12.97□□□□□ -0.33
TARDBP-222ENST00000620505 COL22A1Q8NFW1 1626 aaPredicted RBP12.96□□□□□ -0.33
TARDBP-222ENST00000620505 FNBP4Q8N3X1 1017 aaPredicted RBP12.96□□□□□ -0.33
TARDBP-222ENST00000620505 MYOM2P54296 1465 aa12.96□□□□□ -0.34
TARDBP-222ENST00000620505 KNDC1Q76NI1 1749 aa12.96□□□□□ -0.34
TARDBP-222ENST00000620505 C14orf93Q9H972 538 aaKnown RBP12.95□□□□□ -0.34
TARDBP-222ENST00000620505 FMN2Q9NZ56 1722 aa12.95□□□□□ -0.34
TARDBP-222ENST00000620505 RAB3GAP2Q9H2M9 1393 aa12.94□□□□□ -0.34
TARDBP-222ENST00000620505 KRT28Q7Z3Y7 464 aa12.94□□□□□ -0.34
TARDBP-222ENST00000620505 ATRNO75882 1429 aa12.94□□□□□ -0.34
TARDBP-222ENST00000620505 DHX57Q6P158 1386 aaKnown RBP12.94□□□□□ -0.34
TARDBP-222ENST00000620505 PRAM1Q96QH2 718 aa12.93□□□□□ -0.34
TARDBP-222ENST00000620505 SPATA31A3Q5VYP0 1347 aa12.92□□□□□ -0.34
TARDBP-222ENST00000620505 BCL9LQ86UU0 1499 aa12.92□□□□□ -0.34
TARDBP-222ENST00000620505 LMOD2Q6P5Q4 547 aa12.92□□□□□ -0.34
TARDBP-222ENST00000620505 CABLES1Q8TDN4 633 aa12.92□□□□□ -0.34
TARDBP-222ENST00000620505 POGKQ9P215 609 aa12.92□□□□□ -0.34
TARDBP-222ENST00000620505 PHF8Q9UPP1 1060 aa12.92□□□□□ -0.34
TARDBP-222ENST00000620505 KDM2AQ9Y2K7 1162 aa12.92□□□□□ -0.34
TARDBP-222ENST00000620505 ATAD2Q6PL18 1390 aa12.92□□□□□ -0.34
TARDBP-222ENST00000620505 HAP1P54257 671 aaPredicted RBP12.91□□□□□ -0.34
TARDBP-222ENST00000620505 SIRT1Q96EB6 747 aa12.91□□□□□ -0.34
TARDBP-222ENST00000620505 NRXN1Q9ULB1 1477 aa12.91□□□□□ -0.34
TARDBP-222ENST00000620505 RGPD8O14715 1765 aaPredicted RBP12.9□□□□□ -0.34
TARDBP-222ENST00000620505 PMFBP1Q8TBY8 1022 aa12.9□□□□□ -0.34
TARDBP-222ENST00000620505 GJD4Q96KN9 370 aaPredicted RBP12.9□□□□□ -0.34
TARDBP-222ENST00000620505 HIRIP3Q9BW71 556 aaPredicted RBP12.9□□□□□ -0.34
TARDBP-222ENST00000620505 TRAK1Q9UPV9 953 aa12.9□□□□□ -0.34
TARDBP-222ENST00000620505 MARF1Q9Y4F3 1742 aaKnown RBP12.9□□□□□ -0.34
TARDBP-222ENST00000620505 KIF1AQ12756 1690 aa12.89□□□□□ -0.35
TARDBP-222ENST00000620505 PSME1Q06323 249 aa12.88□□□□□ -0.35
TARDBP-222ENST00000620505 UNC5CLQ8IV45 518 aa12.88□□□□□ -0.35
TARDBP-222ENST00000620505 DCAF11Q8TEB1 546 aa12.88□□□□□ -0.35
TARDBP-222ENST00000620505 TNS3Q68CZ2 1445 aa12.88□□□□□ -0.35
TARDBP-222ENST00000620505 MINK1Q8N4C8 1332 aaPredicted RBP12.88□□□□□ -0.35
TARDBP-222ENST00000620505 ACIN1Q9UKV3 1341 aaKnown RBP12.88□□□□□ -0.35
TARDBP-222ENST00000620505 CCDC9Q9Y3X0 531 aaKnown RBP12.86□□□□□ -0.35
TARDBP-222ENST00000620505 USP32Q8NFA0 1604 aa12.86□□□□□ -0.35
TARDBP-222ENST00000620505 RALGAPBQ86X10 1494 aa12.85□□□□□ -0.35
TARDBP-222ENST00000620505 SLIT2O94813 1529 aa12.85□□□□□ -0.35
TARDBP-222ENST00000620505 GLI3P10071 1580 aa12.85□□□□□ -0.35
TARDBP-222ENST00000620505 DLC1Q96QB1 1528 aa12.84□□□□□ -0.35
TARDBP-222ENST00000620505 ADGRB1O14514 1584 aa12.84□□□□□ -0.35
TARDBP-222ENST00000620505 SBNO1A3KN83 1393 aa12.83□□□□□ -0.36
TARDBP-222ENST00000620505 PRR36Q9H6K5 1346 aa12.83□□□□□ -0.36
TARDBP-222ENST00000620505 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.82□□□□□ -0.36
TARDBP-222ENST00000620505 ANKARQ7Z5J8 1434 aa12.82□□□□□ -0.36
TARDBP-222ENST00000620505 ARHGEF10O15013 1369 aa12.81□□□□□ -0.36
TARDBP-222ENST00000620505 A0A0G2JS52 829 aa12.81□□□□□ -0.36
TARDBP-222ENST00000620505 FAM83GA6ND36 823 aa12.81□□□□□ -0.36
TARDBP-222ENST00000620505 WASLO00401 505 aaPredicted RBP12.81□□□□□ -0.36
TARDBP-222ENST00000620505 MYT1Q01538 1121 aa12.81□□□□□ -0.36
TARDBP-222ENST00000620505 SEPT12Q8IYM1 358 aa12.81□□□□□ -0.36
TARDBP-222ENST00000620505 ADGRB2O60241 1585 aa12.81□□□□□ -0.36
TARDBP-222ENST00000620505 PLCH1Q4KWH8 1693 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms