RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 ABCC3O15438 1527 aa9.94□□□□□ -0.82
BRCC3-209ENST00000620502 PRDM15P57071 1507 aaPredicted RBP9.94□□□□□ -0.82
BRCC3-209ENST00000620502 NPATQ14207 1427 aa9.94□□□□□ -0.82
BRCC3-209ENST00000620502 CEP152O94986 1710 aa9.93□□□□□ -0.82
BRCC3-209ENST00000620502 ANKRD50Q9ULJ7 1429 aa9.92□□□□□ -0.82
BRCC3-209ENST00000620502 HSPA2P54652 639 aa9.92□□□□□ -0.82
BRCC3-209ENST00000620502 FBXO31Q5XUX0 539 aaPredicted RBP9.92□□□□□ -0.82
BRCC3-209ENST00000620502 CAMSAP1Q5T5Y3 1602 aa9.92□□□□□ -0.82
BRCC3-209ENST00000620502 VWDEQ8N2E2 1590 aa9.92□□□□□ -0.82
BRCC3-209ENST00000620502 PZPP20742 1482 aa9.91□□□□□ -0.82
BRCC3-209ENST00000620502 UHRF1BP1Q6BDS2 1440 aa9.9□□□□□ -0.82
BRCC3-209ENST00000620502 KIF3CO14782 793 aa9.9□□□□□ -0.82
BRCC3-209ENST00000620502 MYO3AQ8NEV4 1616 aa9.89□□□□□ -0.83
BRCC3-209ENST00000620502 LMTK2Q8IWU2 1503 aa9.89□□□□□ -0.83
BRCC3-209ENST00000620502 ARHGAP31Q2M1Z3 1444 aa9.89□□□□□ -0.83
BRCC3-209ENST00000620502 UNC13BO14795 1591 aa9.88□□□□□ -0.83
BRCC3-209ENST00000620502 ZNF142P52746 1687 aaPredicted RBP9.88□□□□□ -0.83
BRCC3-209ENST00000620502 STRCQ7RTU9 1775 aa9.88□□□□□ -0.83
BRCC3-209ENST00000620502 SPATA31D1Q6ZQQ2 1576 aa9.88□□□□□ -0.83
BRCC3-209ENST00000620502 KANK1Q14678 1352 aa9.88□□□□□ -0.83
BRCC3-209ENST00000620502 CFAP65Q6ZU64 1925 aaKnown RBP9.88□□□□□ -0.83
BRCC3-209ENST00000620502 C2orf72A6NCS6 295 aa9.87□□□□□ -0.83
BRCC3-209ENST00000620502 PLCB2Q00722 1185 aa9.87□□□□□ -0.83
BRCC3-209ENST00000620502 CADPS2Q86UW7 1296 aa9.87□□□□□ -0.83
BRCC3-209ENST00000620502 NAIPQ13075 1403 aa9.87□□□□□ -0.83
BRCC3-209ENST00000620502 CEP170BQ9Y4F5 1589 aaPredicted RBP9.87□□□□□ -0.83
BRCC3-209ENST00000620502 TNRQ92752 1358 aa9.87□□□□□ -0.83
BRCC3-209ENST00000620502 GCC2Q8IWJ2 1684 aa9.87□□□□□ -0.83
BRCC3-209ENST00000620502 ERVK-7P63135 1459 aa9.86□□□□□ -0.83
BRCC3-209ENST00000620502 A2ML1A8K2U0 1454 aa9.85□□□□□ -0.83
BRCC3-209ENST00000620502 CRISPLD2Q9H0B8 497 aa9.85□□□□□ -0.83
BRCC3-209ENST00000620502 TET3O43151 1660 aa9.85□□□□□ -0.83
BRCC3-209ENST00000620502 EFCAB6Q5THR3 1501 aa9.85□□□□□ -0.83
BRCC3-209ENST00000620502 IQGAP3Q86VI3 1631 aa9.85□□□□□ -0.83
BRCC3-209ENST00000620502 NCKAP5LQ9HCH0 1330 aa9.84□□□□□ -0.83
BRCC3-209ENST00000620502 HFM1A2PYH4 1435 aa9.84□□□□□ -0.83
BRCC3-209ENST00000620502 TMC2Q8TDI7 906 aa9.84□□□□□ -0.83
BRCC3-209ENST00000620502 GPHNQ9NQX3 736 aaPredicted RBP9.84□□□□□ -0.83
BRCC3-209ENST00000620502 NLRP1Q9C000 1473 aa9.84□□□□□ -0.83
BRCC3-209ENST00000620502 NUP155O75694 1391 aa9.83□□□□□ -0.84
BRCC3-209ENST00000620502 E9PCH4 1651 aa9.83□□□□□ -0.84
BRCC3-209ENST00000620502 NOS1P29475 1434 aa9.82□□□□□ -0.84
BRCC3-209ENST00000620502 SYNMO15061 1565 aa9.81□□□□□ -0.84
BRCC3-209ENST00000620502 UGGT1Q9NYU2 1555 aa9.81□□□□□ -0.84
BRCC3-209ENST00000620502 PLA2R1Q13018 1463 aa9.81□□□□□ -0.84
BRCC3-209ENST00000620502 RPRD2Q5VT52 1461 aaKnown RBP9.81□□□□□ -0.84
BRCC3-209ENST00000620502 UBR1Q8IWV7 1749 aa9.81□□□□□ -0.84
BRCC3-209ENST00000620502 PDE4AP27815 886 aa9.8□□□□□ -0.84
BRCC3-209ENST00000620502 FOXK1P85037 733 aa9.8□□□□□ -0.84
BRCC3-209ENST00000620502 PIK3C2BO00750 1634 aa9.8□□□□□ -0.84
BRCC3-209ENST00000620502 SNPHO15079 494 aa9.79□□□□□ -0.84
BRCC3-209ENST00000620502 HOXB3P14651 431 aaPredicted RBP9.79□□□□□ -0.84
BRCC3-209ENST00000620502 IDI1Q13907 227 aa9.79□□□□□ -0.84
BRCC3-209ENST00000620502 THEMISQ8N1K5 641 aaPredicted RBP9.79□□□□□ -0.84
BRCC3-209ENST00000620502 TSHZ2Q9NRE2 1034 aa9.79□□□□□ -0.84
BRCC3-209ENST00000620502 PTPRTO14522 1441 aa9.79□□□□□ -0.84
BRCC3-209ENST00000620502 DSG2Q14126 1118 aa9.78□□□□□ -0.84
BRCC3-209ENST00000620502 POLR1AO95602 1720 aaPredicted RBP9.78□□□□□ -0.84
BRCC3-209ENST00000620502 KDM5AP29375 1690 aaKnown RBP9.77□□□□□ -0.84
BRCC3-209ENST00000620502 NEURL4Q96JN8 1562 aa9.77□□□□□ -0.85
BRCC3-209ENST00000620502 MFSD10Q14728 455 aa9.77□□□□□ -0.85
BRCC3-209ENST00000620502 SLC52A1Q9NWF4 448 aa9.77□□□□□ -0.85
BRCC3-209ENST00000620502 TRIM52Q96A61 297 aa9.76□□□□□ -0.85
BRCC3-209ENST00000620502 LARP6Q9BRS8 491 aaKnown RBP9.76□□□□□ -0.85
BRCC3-209ENST00000620502 ARHGAP23Q9P227 1491 aa9.76□□□□□ -0.85
BRCC3-209ENST00000620502 SETD5Q9C0A6 1442 aa9.75□□□□□ -0.85
BRCC3-209ENST00000620502 LCE2DQ5TA82 110 aaPredicted RBP9.75□□□□□ -0.85
BRCC3-209ENST00000620502 ANKLE2Q86XL3 938 aa9.75□□□□□ -0.85
BRCC3-209ENST00000620502 PLPP6Q8IY26 295 aa9.75□□□□□ -0.85
BRCC3-209ENST00000620502 SPHKAPQ2M3C7 1700 aa9.75□□□□□ -0.85
BRCC3-209ENST00000620502 SLIT1O75093 1534 aa9.75□□□□□ -0.85
BRCC3-209ENST00000620502 MYO5BQ9ULV0 1848 aa9.75□□□□□ -0.85
BRCC3-209ENST00000620502 TMEM131LA2VDJ0 1609 aa9.74□□□□□ -0.85
BRCC3-209ENST00000620502 MED14O60244 1454 aa9.74□□□□□ -0.85
BRCC3-209ENST00000620502 ADGRB3O60242 1522 aa9.74□□□□□ -0.85
BRCC3-209ENST00000620502 DOK7Q18PE1 504 aa9.74□□□□□ -0.85
BRCC3-209ENST00000620502 PPP1R15BQ5SWA1 713 aa9.74□□□□□ -0.85
BRCC3-209ENST00000620502 LTKP29376 864 aa9.73□□□□□ -0.85
BRCC3-209ENST00000620502 FAM163AQ96GL9 167 aaPredicted RBP9.73□□□□□ -0.85
BRCC3-209ENST00000620502 DDX27Q96GQ7 796 aaKnown RBP9.73□□□□□ -0.85
BRCC3-209ENST00000620502 TMEM2Q9UHN6 1383 aa9.73□□□□□ -0.85
BRCC3-209ENST00000620502 ST18O60284 1047 aa9.72□□□□□ -0.85
BRCC3-209ENST00000620502 TXNDC2Q86VQ3 553 aa9.72□□□□□ -0.85
BRCC3-209ENST00000620502 RAB3GAP2Q9H2M9 1393 aa9.72□□□□□ -0.85
BRCC3-209ENST00000620502 NPHP4O75161 1426 aaPredicted RBP9.72□□□□□ -0.85
BRCC3-209ENST00000620502 LTBP4Q8N2S1 1624 aa9.71□□□□□ -0.85
BRCC3-209ENST00000620502 IQGAP1P46940 1657 aa9.71□□□□□ -0.85
BRCC3-209ENST00000620502 SLC34A2O95436 690 aa9.71□□□□□ -0.86
BRCC3-209ENST00000620502 MPHOSPH9Q99550 1183 aa9.71□□□□□ -0.86
BRCC3-209ENST00000620502 SCAF11Q99590 1463 aaKnown RBP9.71□□□□□ -0.86
BRCC3-209ENST00000620502 TRPM2O94759 1503 aa9.71□□□□□ -0.86
BRCC3-209ENST00000620502 CLTCL1P53675 1640 aa9.71□□□□□ -0.86
BRCC3-209ENST00000620502 ACIN1Q9UKV3 1341 aaKnown RBP9.7□□□□□ -0.86
BRCC3-209ENST00000620502 ZFYVE9O95405 1425 aa9.7□□□□□ -0.86
BRCC3-209ENST00000620502 HRCP23327 699 aa9.69□□□□□ -0.86
BRCC3-209ENST00000620502 CERKQ8TCT0 537 aa9.69□□□□□ -0.86
BRCC3-209ENST00000620502 ZNF335Q9H4Z2 1342 aaPredicted RBP9.69□□□□□ -0.86
BRCC3-209ENST00000620502 ZSWIM6Q9HCJ5 1215 aa9.69□□□□□ -0.86
BRCC3-209ENST00000620502 EID1Q9Y6B2 187 aa9.69□□□□□ -0.86
BRCC3-209ENST00000620502 RIMBP2O15034 1052 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms