RNA–Protein interactions for RNA: ENST00000619160.4

PCSK6-218, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,093 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-218ENST00000619160 NSD3Q9BZ95 1437 aa29.36■■■□□ 2.29
PCSK6-218ENST00000619160 KANK1Q14678 1352 aa29.36■■■□□ 2.29
PCSK6-218ENST00000619160 GOLGA6L3A6NEY3 463 aa29.36■■■□□ 2.29
PCSK6-218ENST00000619160 PLCH2O75038 1416 aa29.36■■■□□ 2.29
PCSK6-218ENST00000619160 HSP90AA2PQ14568 343 aaPredicted RBP29.36■■■□□ 2.29
PCSK6-218ENST00000619160 PANK2Q9BZ23 570 aa29.36■■■□□ 2.29
PCSK6-218ENST00000619160 NLRP1Q9C000 1473 aa29.35■■■□□ 2.29
PCSK6-218ENST00000619160 U2AF1L5P0DN76 240 aaPredicted RBP29.35■■■□□ 2.29
PCSK6-218ENST00000619160 U2AF1Q01081 240 aaKnown RBP eCLIP29.35■■■□□ 2.29
PCSK6-218ENST00000619160 MYOM1P52179 1685 aa29.35■■■□□ 2.29
PCSK6-218ENST00000619160 KDM5AP29375 1690 aaKnown RBP29.34■■■□□ 2.29
PCSK6-218ENST00000619160 CFAP53Q96M91 514 aa29.33■■■□□ 2.29
PCSK6-218ENST00000619160 TRPM2O94759 1503 aa29.33■■■□□ 2.29
PCSK6-218ENST00000619160 C22orf23Q9BZE7 217 aa29.32■■■□□ 2.28
PCSK6-218ENST00000619160 MCM4P33991 863 aa29.31■■■□□ 2.28
PCSK6-218ENST00000619160 CLTCL1P53675 1640 aa29.31■■■□□ 2.28
PCSK6-218ENST00000619160 WDR63Q8IWG1 891 aa29.31■■■□□ 2.28
PCSK6-218ENST00000619160 TSR2Q969E8 191 aaKnown RBP29.31■■■□□ 2.28
PCSK6-218ENST00000619160 MYH16Q9H6N6 1097 aa29.31■■■□□ 2.28
PCSK6-218ENST00000619160 XRCC6P12956 609 aaKnown RBP eCLIP29.3■■■□□ 2.28
PCSK6-218ENST00000619160 MVPQ14764 893 aaKnown RBP29.3■■■□□ 2.28
PCSK6-218ENST00000619160 ZKSCAN2Q63HK3 967 aa29.3■■■□□ 2.28
PCSK6-218ENST00000619160 AAMPQ13685 434 aa29.29■■■□□ 2.28
PCSK6-218ENST00000619160 HSP90AA1P07900 732 aaKnown RBP29.29■■■□□ 2.28
PCSK6-218ENST00000619160 DZIP1LQ8IYY4 767 aaKnown RBP29.29■■■□□ 2.28
PCSK6-218ENST00000619160 PTPRTO14522 1441 aa29.29■■■□□ 2.28
PCSK6-218ENST00000619160 SMC4Q9NTJ3 1288 aa29.29■■■□□ 2.28
PCSK6-218ENST00000619160 TMEM132EQ6IEE7 984 aa29.28■■■□□ 2.28
PCSK6-218ENST00000619160 ITPRIPQ8IWB1 547 aa29.28■■■□□ 2.28
PCSK6-218ENST00000619160 SPHKAPQ2M3C7 1700 aa29.27■■■□□ 2.28
PCSK6-218ENST00000619160 SENP3Q9H4L4 574 aaPredicted RBP29.26■■■□□ 2.27
PCSK6-218ENST00000619160 UGGT1Q9NYU2 1555 aa29.25■■■□□ 2.27
PCSK6-218ENST00000619160 CHMP5Q9NZZ3 219 aa29.24■■■□□ 2.27
PCSK6-218ENST00000619160 U2SURPO15042 1029 aaKnown RBP29.24■■■□□ 2.27
PCSK6-218ENST00000619160 TRAK2O60296 914 aa29.24■■■□□ 2.27
PCSK6-218ENST00000619160 HSCBQ8IWL3 235 aa29.22■■■□□ 2.27
PCSK6-218ENST00000619160 VIRMAQ69YN4 1812 aaKnown RBP29.21■■■□□ 2.27
PCSK6-218ENST00000619160 EXOSC9Q06265 439 aaKnown RBP29.2■■■□□ 2.27
PCSK6-218ENST00000619160 PHF23Q9BUL5 403 aaPredicted RBP29.19■■■□□ 2.26
PCSK6-218ENST00000619160 CEP152O94986 1710 aa29.19■■■□□ 2.26
PCSK6-218ENST00000619160 ABCC1P33527 1531 aa29.19■■■□□ 2.26
PCSK6-218ENST00000619160 SAFB2Q14151 953 aaKnown RBP eCLIP29.18■■■□□ 2.262e-6■□□□□ 9.5
PCSK6-218ENST00000619160 ERCC6L2Q5T890 1561 aa29.18■■■□□ 2.26
PCSK6-218ENST00000619160 NUTM2DQ5VT03 806 aaPredicted RBP29.18■■■□□ 2.26
PCSK6-218ENST00000619160 TRIM27P14373 513 aa29.17■■■□□ 2.26
PCSK6-218ENST00000619160 NOS1P29475 1434 aa29.14■■■□□ 2.26
PCSK6-218ENST00000619160 CCDC27Q2M243 656 aa29.14■■■□□ 2.26
PCSK6-218ENST00000619160 SSH1Q8WYL5 1049 aa29.14■■■□□ 2.26
PCSK6-218ENST00000619160 FSD2A1L4K1 749 aa29.13■■■□□ 2.25
PCSK6-218ENST00000619160 DDX19BQ9UMR2 479 aa29.12■■■□□ 2.25
PCSK6-218ENST00000619160 CLCN1P35523 988 aa29.12■■■□□ 2.25
PCSK6-218ENST00000619160 NOB1Q9ULX3 412 aaKnown RBP29.12■■■□□ 2.25
PCSK6-218ENST00000619160 LNPKQ9C0E8 428 aa29.11■■■□□ 2.25
PCSK6-218ENST00000619160 ABCA6Q8N139 1617 aa29.11■■■□□ 2.25
PCSK6-218ENST00000619160 ZMYM3Q14202 1370 aa29.1■■■□□ 2.25
PCSK6-218ENST00000619160 RTEL1-TNFRSF6BF6WH68 1400 aa29.1■■■□□ 2.25
PCSK6-218ENST00000619160 FOXD4L1Q9NU39 408 aa29.1■■■□□ 2.25
PCSK6-218ENST00000619160 RRP9O43818 475 aaKnown RBP29.09■■■□□ 2.25
PCSK6-218ENST00000619160 IQSEC2Q5JU85 1478 aa29.09■■■□□ 2.25
PCSK6-218ENST00000619160 ATF7IPQ6VMQ6 1270 aa29.09■■■□□ 2.25
PCSK6-218ENST00000619160 TMEM57Q8N5G2 664 aa29.09■■■□□ 2.25
PCSK6-218ENST00000619160 ZFYVE16Q7Z3T8 1539 aa29.08■■■□□ 2.25
PCSK6-218ENST00000619160 MAP3K4Q9Y6R4 1608 aa29.08■■■□□ 2.25
PCSK6-218ENST00000619160 CABP2Q9NPB3 220 aa29.08■■■□□ 2.25
PCSK6-218ENST00000619160 HSP90AB1P08238 724 aaKnown RBP29.07■■■□□ 2.24
PCSK6-218ENST00000619160 MRE11P49959 708 aa29.07■■■□□ 2.24
PCSK6-218ENST00000619160 DDX11L8A8MPP1 907 aa29.06■■■□□ 2.24
PCSK6-218ENST00000619160 ZNF518AQ6AHZ1 1483 aa29.06■■■□□ 2.24
PCSK6-218ENST00000619160 SBNO2Q9Y2G9 1366 aa29.06■■■□□ 2.24
PCSK6-218ENST00000619160 HDAC1Q13547 482 aaPredicted RBP29.05■■■□□ 2.24
PCSK6-218ENST00000619160 MYOM2P54296 1465 aa29.05■■■□□ 2.24
PCSK6-218ENST00000619160 GGNBP2Q9H3C7 697 aa29.05■■■□□ 2.24
PCSK6-218ENST00000619160 GRPEL1Q9HAV7 217 aa29.05■■■□□ 2.24
PCSK6-218ENST00000619160 TET3O43151 1660 aa29.04■■■□□ 2.24
PCSK6-218ENST00000619160 TMPOP42166 694 aaKnown RBP29.04■■■□□ 2.24
PCSK6-218ENST00000619160 GGT6Q6P531 493 aa29.04■■■□□ 2.24
PCSK6-218ENST00000619160 SHPRHQ149N8 1683 aa29.02■■■□□ 2.24
PCSK6-218ENST00000619160 C14orf93Q9H972 538 aaKnown RBP29.02■■■□□ 2.24
PCSK6-218ENST00000619160 SMC5Q8IY18 1101 aa29■■■□□ 2.23
PCSK6-218ENST00000619160 SHROOM2Q13796 1616 aa29■■■□□ 2.23
PCSK6-218ENST00000619160 KIAA1210Q9ULL0 1709 aa29■■■□□ 2.23
PCSK6-218ENST00000619160 RIPK4P57078 832 aa29■■■□□ 2.23
PCSK6-218ENST00000619160 ERBB4Q15303 1308 aa29■■■□□ 2.23
PCSK6-218ENST00000619160 EVC2Q86UK5 1308 aa29■■■□□ 2.23
PCSK6-218ENST00000619160 CT47B1P0C2W7 299 aaPredicted RBP28.99■■■□□ 2.23
PCSK6-218ENST00000619160 TNPO1Q92973 898 aaKnown RBP28.99■■■□□ 2.23
PCSK6-218ENST00000619160 TRIM44Q96DX7 344 aaPredicted RBP28.99■■■□□ 2.23
PCSK6-218ENST00000619160 STK26Q9P289 416 aa28.98■■■□□ 2.23
PCSK6-218ENST00000619160 SRPK2P78362 688 aaKnown RBP28.98■■■□□ 2.23
PCSK6-218ENST00000619160 TRIM35Q9UPQ4 493 aa28.98■■■□□ 2.23
PCSK6-218ENST00000619160 ATP7AQ04656 1500 aa28.97■■■□□ 2.23
PCSK6-218ENST00000619160 ZNF692Q9BU19 519 aaPredicted RBP28.96■■■□□ 2.23
PCSK6-218ENST00000619160 ZBTB40Q9NUA8 1239 aa28.96■■■□□ 2.23
PCSK6-218ENST00000619160 IPO8O15397 1037 aaKnown RBP28.96■■■□□ 2.23
PCSK6-218ENST00000619160 ZCCHC11Q5TAX3 1644 aaKnown RBP28.96■■■□□ 2.23
PCSK6-218ENST00000619160 FANCAO15360 1455 aa28.96■■■□□ 2.23
PCSK6-218ENST00000619160 ANKRD45Q5TZF3 282 aa28.95■■■□□ 2.23
PCSK6-218ENST00000619160 CHD1O14646 1710 aa28.95■■■□□ 2.23
PCSK6-218ENST00000619160 GBP4Q96PP9 640 aa28.95■■■□□ 2.22
PCSK6-218ENST00000619160 ESPNB1AK53 854 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms