RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 SALL2Q9Y467 1007 aaPredicted RBP20.89■□□□□ 0.93
NR1H3-235ENST00000616973 ZMYM3Q14202 1370 aa20.89■□□□□ 0.93
NR1H3-235ENST00000616973 SHPRHQ149N8 1683 aa20.88■□□□□ 0.93
NR1H3-235ENST00000616973 MLECQ14165 292 aa20.88■□□□□ 0.93
NR1H3-235ENST00000616973 RCAN3Q9UKA8 241 aa20.88■□□□□ 0.93
NR1H3-235ENST00000616973 CGNL1Q0VF96 1302 aa20.87■□□□□ 0.93
NR1H3-235ENST00000616973 NRXN3Q9Y4C0 1643 aa20.87■□□□□ 0.93
NR1H3-235ENST00000616973 STK26Q9P289 416 aa20.86■□□□□ 0.93
NR1H3-235ENST00000616973 ATAD2Q6PL18 1390 aa20.86■□□□□ 0.93
NR1H3-235ENST00000616973 ANKRD26Q9UPS8 1709 aa20.86■□□□□ 0.93
NR1H3-235ENST00000616973 ESF1Q9H501 851 aaKnown RBP20.86■□□□□ 0.93
NR1H3-235ENST00000616973 ZNF521Q96K83 1311 aa20.85■□□□□ 0.93
NR1H3-235ENST00000616973 MORC1Q86VD1 984 aa20.85■□□□□ 0.93
NR1H3-235ENST00000616973 CDCA7LQ96GN5 454 aa20.85■□□□□ 0.93
NR1H3-235ENST00000616973 RRP1P56182 461 aaKnown RBP20.84■□□□□ 0.93
NR1H3-235ENST00000616973 PRAM1Q96QH2 718 aa20.84■□□□□ 0.93
NR1H3-235ENST00000616973 CABP2Q9NPB3 220 aa20.84■□□□□ 0.93
NR1H3-235ENST00000616973 PLEKHH1Q9ULM0 1364 aa20.83■□□□□ 0.93
NR1H3-235ENST00000616973 NGEFQ8N5V2 710 aa20.83■□□□□ 0.93
NR1H3-235ENST00000616973 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.83■□□□□ 0.93
NR1H3-235ENST00000616973 KNDC1Q76NI1 1749 aa20.83■□□□□ 0.92
NR1H3-235ENST00000616973 UBR1Q8IWV7 1749 aa20.83■□□□□ 0.92
NR1H3-235ENST00000616973 POGKQ9P215 609 aa20.82■□□□□ 0.92
NR1H3-235ENST00000616973 B4GALNT3Q6L9W6 998 aa20.81■□□□□ 0.92
NR1H3-235ENST00000616973 ABCC11Q96J66 1382 aa20.81■□□□□ 0.92
NR1H3-235ENST00000616973 SAFB2Q14151 953 aaKnown RBP eCLIP20.8■□□□□ 0.92
NR1H3-235ENST00000616973 TNRQ92752 1358 aa20.8■□□□□ 0.92
NR1H3-235ENST00000616973 SRPK2P78362 688 aaKnown RBP20.79■□□□□ 0.92
NR1H3-235ENST00000616973 A0A1W2PP64 1363 aa20.79■□□□□ 0.92
NR1H3-235ENST00000616973 MED14O60244 1454 aa20.78■□□□□ 0.92
NR1H3-235ENST00000616973 MINK1Q8N4C8 1332 aaPredicted RBP20.78■□□□□ 0.92
NR1H3-235ENST00000616973 CD163L1Q9NR16 1453 aa20.78■□□□□ 0.92
NR1H3-235ENST00000616973 HDGFP51858 240 aaKnown RBP20.77■□□□□ 0.92
NR1H3-235ENST00000616973 KIF20BQ96Q89 1820 aa20.77■□□□□ 0.92
NR1H3-235ENST00000616973 GOLGA2Q08379 1002 aa20.76■□□□□ 0.91
NR1H3-235ENST00000616973 TERF2IPQ9NYB0 399 aa20.76■□□□□ 0.91
NR1H3-235ENST00000616973 SENP3Q9H4L4 574 aaPredicted RBP20.75■□□□□ 0.91
NR1H3-235ENST00000616973 DUSP27Q5VZP5 1158 aa20.74■□□□□ 0.91
NR1H3-235ENST00000616973 CCDC146Q8IYE0 955 aa20.74■□□□□ 0.91
NR1H3-235ENST00000616973 TRMT2AQ8IZ69 625 aaKnown RBP20.74■□□□□ 0.91
NR1H3-235ENST00000616973 CDK19Q9BWU1 502 aa20.74■□□□□ 0.91
NR1H3-235ENST00000616973 APAF1O14727 1248 aa20.73■□□□□ 0.91
NR1H3-235ENST00000616973 TECPR2O15040 1411 aa20.73■□□□□ 0.91
NR1H3-235ENST00000616973 SLFN5Q08AF3 891 aa20.72■□□□□ 0.91
NR1H3-235ENST00000616973 SIRT1Q96EB6 747 aa20.72■□□□□ 0.91
NR1H3-235ENST00000616973 CCDC136Q96JN2 1154 aa20.72■□□□□ 0.91
NR1H3-235ENST00000616973 CFAP53Q96M91 514 aa20.72■□□□□ 0.91
NR1H3-235ENST00000616973 CPS1P31327 1500 aa20.72■□□□□ 0.91
NR1H3-235ENST00000616973 NLRP1Q9C000 1473 aa20.72■□□□□ 0.91
NR1H3-235ENST00000616973 ATP7BP35670 1465 aa20.71■□□□□ 0.91
NR1H3-235ENST00000616973 FAM135BQ49AJ0 1406 aa20.71■□□□□ 0.91
NR1H3-235ENST00000616973 MTHFSP49914 203 aa20.71■□□□□ 0.91
NR1H3-235ENST00000616973 TMEM2Q9UHN6 1383 aa20.71■□□□□ 0.91
NR1H3-235ENST00000616973 C3P01024 1663 aa20.7■□□□□ 0.9
NR1H3-235ENST00000616973 RBM19Q9Y4C8 960 aaKnown RBP20.7■□□□□ 0.9
NR1H3-235ENST00000616973 IQSEC2Q5JU85 1478 aa20.7■□□□□ 0.9
NR1H3-235ENST00000616973 TNNT2P45379 298 aaPredicted RBP20.69■□□□□ 0.9
NR1H3-235ENST00000616973 HDGFL2Q7Z4V5 671 aaPredicted RBP20.69■□□□□ 0.9
NR1H3-235ENST00000616973 METP08581 1390 aa20.69■□□□□ 0.9
NR1H3-235ENST00000616973 FER1L4A9Z1Z3 1794 aa20.68■□□□□ 0.9
NR1H3-235ENST00000616973 NCBP3Q53F19 620 aaKnown RBP20.67■□□□□ 0.9
NR1H3-235ENST00000616973 RUNDC1Q96C34 613 aa20.67■□□□□ 0.9
NR1H3-235ENST00000616973 WAPLQ7Z5K2 1190 aa20.66■□□□□ 0.9
NR1H3-235ENST00000616973 EXOC6Q8TAG9 804 aa20.66■□□□□ 0.9
NR1H3-235ENST00000616973 E9PSI1 815 aa20.66■□□□□ 0.9
NR1H3-235ENST00000616973 FYB1O15117 783 aa20.66■□□□□ 0.9
NR1H3-235ENST00000616973 NKTRP30414 1462 aaKnown RBP20.66■□□□□ 0.9
NR1H3-235ENST00000616973 ADGRB2O60241 1585 aa20.65■□□□□ 0.9
NR1H3-235ENST00000616973 COL3A1P02461 1466 aaPredicted RBP20.65■□□□□ 0.9
NR1H3-235ENST00000616973 CABP1Q9NZU7 370 aa20.64■□□□□ 0.89
NR1H3-235ENST00000616973 PLEKHG1Q9ULL1 1385 aa20.63■□□□□ 0.89
NR1H3-235ENST00000616973 ADAMTS13Q76LX8 1427 aa20.63■□□□□ 0.89
NR1H3-235ENST00000616973 MON2Q7Z3U7 1717 aa20.62■□□□□ 0.89
NR1H3-235ENST00000616973 AKAP12Q02952 1782 aa20.62■□□□□ 0.89
NR1H3-235ENST00000616973 WASLO00401 505 aaPredicted RBP20.62■□□□□ 0.89
NR1H3-235ENST00000616973 WWC1Q8IX03 1113 aa20.62■□□□□ 0.89
NR1H3-235ENST00000616973 PHF23Q9BUL5 403 aaPredicted RBP20.62■□□□□ 0.89
NR1H3-235ENST00000616973 GGNBP2Q9H3C7 697 aa20.62■□□□□ 0.89
NR1H3-235ENST00000616973 CPSF1Q10570 1443 aaKnown RBP20.61■□□□□ 0.89
NR1H3-235ENST00000616973 SLIT1O75093 1534 aa20.61■□□□□ 0.89
NR1H3-235ENST00000616973 ITSN1Q15811 1721 aa20.61■□□□□ 0.89
NR1H3-235ENST00000616973 CDC42BPGQ6DT37 1551 aa20.6■□□□□ 0.89
NR1H3-235ENST00000616973 CCDC27Q2M243 656 aa20.6■□□□□ 0.89
NR1H3-235ENST00000616973 SPINK5Q9NQ38 1064 aaPredicted RBP20.6■□□□□ 0.89
NR1H3-235ENST00000616973 ARHGAP23Q9P227 1491 aa20.59■□□□□ 0.89
NR1H3-235ENST00000616973 PLIN1O60240 522 aa20.59■□□□□ 0.89
NR1H3-235ENST00000616973 TCP11L2Q8N4U5 519 aa20.59■□□□□ 0.89
NR1H3-235ENST00000616973 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.59■□□□□ 0.89
NR1H3-235ENST00000616973 TXNDC2Q86VQ3 553 aa20.58■□□□□ 0.88
NR1H3-235ENST00000616973 EDC4Q6P2E9 1401 aaKnown RBP20.58■□□□□ 0.88
NR1H3-235ENST00000616973 PPIP5K1Q6PFW1 1433 aa20.58■□□□□ 0.88
NR1H3-235ENST00000616973 PNPLA6Q8IY17 1366 aa20.57■□□□□ 0.88
NR1H3-235ENST00000616973 MAP2P11137 1827 aaKnown RBP20.57■□□□□ 0.88
NR1H3-235ENST00000616973 WDR63Q8IWG1 891 aa20.57■□□□□ 0.88
NR1H3-235ENST00000616973 DNAJC5Q9H3Z4 198 aa20.57■□□□□ 0.88
NR1H3-235ENST00000616973 CRBNQ96SW2 442 aa20.56■□□□□ 0.88
NR1H3-235ENST00000616973 DMRT2Q9Y5R5 561 aa20.56■□□□□ 0.88
NR1H3-235ENST00000616973 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.55■□□□□ 0.88
NR1H3-235ENST00000616973 U2AF1L5P0DN76 240 aaPredicted RBP20.55■□□□□ 0.88
NR1H3-235ENST00000616973 U2AF1Q01081 240 aaKnown RBP eCLIP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms