RNA–Protein interactions for RNA: ENST00000616527.4

MALAT1-208, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-208ENST00000616527 FOSBP53539 338 aa11.28□□□□□ -0.6
MALAT1-208ENST00000616527 EFCAB2Q5VUJ9 269 aa11.28□□□□□ -0.6
MALAT1-208ENST00000616527 ZNF777Q9ULD5 760 aaPredicted RBP11.28□□□□□ -0.6
MALAT1-208ENST00000616527 WDR7Q9Y4E6 1490 aa11.27□□□□□ -0.6
MALAT1-208ENST00000616527 KDM5DQ9BY66 1539 aa11.27□□□□□ -0.61
MALAT1-208ENST00000616527 TRIM52Q96A61 297 aa11.27□□□□□ -0.61
MALAT1-208ENST00000616527 WDR70Q9NW82 654 aa11.27□□□□□ -0.61
MALAT1-208ENST00000616527 SAMD9LQ8IVG5 1584 aa11.27□□□□□ -0.61
MALAT1-208ENST00000616527 KDM6BO15054 1643 aa11.27□□□□□ -0.61
MALAT1-208ENST00000616527 TONSLQ96HA7 1378 aa11.27□□□□□ -0.61
MALAT1-208ENST00000616527 TTC37Q6PGP7 1564 aa11.26□□□□□ -0.61
MALAT1-208ENST00000616527 CDC42BPBQ9Y5S2 1711 aa11.26□□□□□ -0.61
MALAT1-208ENST00000616527 ARHGAP5Q13017 1502 aa11.25□□□□□ -0.61
MALAT1-208ENST00000616527 DPYSL4O14531 572 aa11.25□□□□□ -0.61
MALAT1-208ENST00000616527 PTGER2P43116 358 aa11.25□□□□□ -0.61
MALAT1-208ENST00000616527 PZPP20742 1482 aa11.25□□□□□ -0.61
MALAT1-208ENST00000616527 PSEN2P49810 448 aa11.24□□□□□ -0.61
MALAT1-208ENST00000616527 HNRNPMP52272 730 aaKnown RBP eCLIP11.24□□□□□ -0.612e-39■□□□□ 8.4
MALAT1-208ENST00000616527 NEUROD1Q13562 356 aa11.24□□□□□ -0.61
MALAT1-208ENST00000616527 KIF15Q9NS87 1388 aa11.24□□□□□ -0.61
MALAT1-208ENST00000616527 RTEL1-TNFRSF6BF6WH68 1400 aa11.24□□□□□ -0.61
MALAT1-208ENST00000616527 MYO5CQ9NQX4 1742 aa11.23□□□□□ -0.61
MALAT1-208ENST00000616527 E2F4Q16254 413 aa11.23□□□□□ -0.61
MALAT1-208ENST00000616527 BCL2L12Q9HB09 334 aa11.23□□□□□ -0.61
MALAT1-208ENST00000616527 RPRD2Q5VT52 1461 aaKnown RBP11.23□□□□□ -0.61
MALAT1-208ENST00000616527 PLXNC1O60486 1568 aa11.22□□□□□ -0.61
MALAT1-208ENST00000616527 ZDHHC16Q969W1 377 aa11.22□□□□□ -0.61
MALAT1-208ENST00000616527 KCNH8Q96L42 1107 aa11.22□□□□□ -0.61
MALAT1-208ENST00000616527 MYT1LQ9UL68 1186 aa11.22□□□□□ -0.61
MALAT1-208ENST00000616527 DMRTA1Q5VZB9 504 aa11.21□□□□□ -0.61
MALAT1-208ENST00000616527 KCNK17Q96T54 332 aa11.21□□□□□ -0.61
MALAT1-208ENST00000616527 ABCA9Q8IUA7 1624 aa11.2□□□□□ -0.62
MALAT1-208ENST00000616527 ABCC1P33527 1531 aa11.2□□□□□ -0.62
MALAT1-208ENST00000616527 SYCP2Q9BX26 1530 aa11.2□□□□□ -0.62
MALAT1-208ENST00000616527 TK2O00142 265 aa11.2□□□□□ -0.62
MALAT1-208ENST00000616527 ADGRD1Q6QNK2 874 aa11.2□□□□□ -0.62
MALAT1-208ENST00000616527 ASXL2Q76L83 1435 aa11.19□□□□□ -0.62
MALAT1-208ENST00000616527 ERBINQ96RT1 1412 aa11.19□□□□□ -0.62
MALAT1-208ENST00000616527 PCDHGA10Q9Y5H3 936 aa11.19□□□□□ -0.62
MALAT1-208ENST00000616527 DUOX2Q9NRD8 1548 aa11.19□□□□□ -0.62
MALAT1-208ENST00000616527 ARHGEF12Q9NZN5 1544 aa11.19□□□□□ -0.62
MALAT1-208ENST00000616527 NUP155O75694 1391 aa11.18□□□□□ -0.62
MALAT1-208ENST00000616527 PHF14O94880 888 aa11.18□□□□□ -0.62
MALAT1-208ENST00000616527 PTPREP23469 700 aa11.18□□□□□ -0.62
MALAT1-208ENST00000616527 RNF166Q96A37 237 aaPredicted RBP11.18□□□□□ -0.62
MALAT1-208ENST00000616527 ARIH1Q9Y4X5 557 aaPredicted RBP11.18□□□□□ -0.62
MALAT1-208ENST00000616527 TPRNQ4KMQ1 711 aa11.17□□□□□ -0.62
MALAT1-208ENST00000616527 ADAM33Q9BZ11 813 aa11.17□□□□□ -0.62
MALAT1-208ENST00000616527 SPDYE16A6NNV3 312 aaPredicted RBP11.16□□□□□ -0.62
MALAT1-208ENST00000616527 PDIA6Q15084 440 aa11.16□□□□□ -0.62
MALAT1-208ENST00000616527 MAGI2Q86UL8 1455 aa11.16□□□□□ -0.62
MALAT1-208ENST00000616527 TEX14Q8IWB6 1497 aa11.16□□□□□ -0.62
MALAT1-208ENST00000616527 TYW1BQ6NUM6 668 aa11.15□□□□□ -0.62
MALAT1-208ENST00000616527 FBXW7Q969H0 707 aa11.15□□□□□ -0.62
MALAT1-208ENST00000616527 UNC13BO14795 1591 aa11.15□□□□□ -0.62
MALAT1-208ENST00000616527 FANCAO15360 1455 aa11.14□□□□□ -0.63
MALAT1-208ENST00000616527 L3MBTL2Q969R5 705 aa11.14□□□□□ -0.63
MALAT1-208ENST00000616527 TRAPPC8Q9Y2L5 1435 aa11.14□□□□□ -0.63
MALAT1-208ENST00000616527 ATP10AO60312 1499 aa11.13□□□□□ -0.63
MALAT1-208ENST00000616527 SPAG9O60271 1321 aaKnown RBP11.13□□□□□ -0.63
MALAT1-208ENST00000616527 HRO43593 1189 aa11.13□□□□□ -0.63
MALAT1-208ENST00000616527 NBR1Q14596 966 aa11.13□□□□□ -0.63
MALAT1-208ENST00000616527 EPAS1Q99814 870 aa11.13□□□□□ -0.63
MALAT1-208ENST00000616527 SLC4A5Q9BY07 1137 aa11.13□□□□□ -0.63
MALAT1-208ENST00000616527 FAM135AQ9P2D6 1515 aa11.12□□□□□ -0.63
MALAT1-208ENST00000616527 UHRF1BP1Q6BDS2 1440 aa11.11□□□□□ -0.63
MALAT1-208ENST00000616527 VPS9D1Q9Y2B5 631 aa11.11□□□□□ -0.63
MALAT1-208ENST00000616527 DDX12PQ92771 950 aa11.1□□□□□ -0.63
MALAT1-208ENST00000616527 ADGRL1O94910 1474 aa11.1□□□□□ -0.63
MALAT1-208ENST00000616527 CD109Q6YHK3 1445 aa11.09□□□□□ -0.63
MALAT1-208ENST00000616527 SCAPERQ9BY12 1400 aa11.09□□□□□ -0.63
MALAT1-208ENST00000616527 ZFYVE16Q7Z3T8 1539 aa11.09□□□□□ -0.63
MALAT1-208ENST00000616527 IQGAP3Q86VI3 1631 aa11.09□□□□□ -0.63
MALAT1-208ENST00000616527 CFAP74Q9C0B2 1584 aa11.09□□□□□ -0.63
MALAT1-208ENST00000616527 NEO1Q92859 1461 aa11.09□□□□□ -0.63
MALAT1-208ENST00000616527 ZBED2Q9BTP6 218 aa11.09□□□□□ -0.63
MALAT1-208ENST00000616527 DHX29Q7Z478 1369 aaKnown RBP11.08□□□□□ -0.64
MALAT1-208ENST00000616527 INO80Q9ULG1 1556 aaPredicted RBP11.07□□□□□ -0.64
MALAT1-208ENST00000616527 ZNF518AQ6AHZ1 1483 aa11.07□□□□□ -0.64
MALAT1-208ENST00000616527 PPP1R3GB7ZBB8 358 aa11.07□□□□□ -0.64
MALAT1-208ENST00000616527 EIF4G2P78344 907 aaKnown RBP eCLIP11.07□□□□□ -0.64
MALAT1-208ENST00000616527 AFAP1Q8N556 730 aa11.07□□□□□ -0.64
MALAT1-208ENST00000616527 STAC3Q96MF2 364 aa11.07□□□□□ -0.64
MALAT1-208ENST00000616527 GLI2P10070 1586 aa11.07□□□□□ -0.64
MALAT1-208ENST00000616527 MLH3Q9UHC1 1453 aa11.06□□□□□ -0.64
MALAT1-208ENST00000616527 ATP7AQ04656 1500 aa11.06□□□□□ -0.64
MALAT1-208ENST00000616527 SPATA31E1Q6ZUB1 1445 aa11.06□□□□□ -0.64
MALAT1-208ENST00000616527 C6orf132Q5T0Z8 1188 aa11.05□□□□□ -0.64
MALAT1-208ENST00000616527 PLA2R1Q13018 1463 aa11.05□□□□□ -0.64
MALAT1-208ENST00000616527 KDM5CP41229 1560 aa11.04□□□□□ -0.64
MALAT1-208ENST00000616527 VWDEQ8N2E2 1590 aa11.04□□□□□ -0.64
MALAT1-208ENST00000616527 POGZQ7Z3K3 1410 aa11.04□□□□□ -0.64
MALAT1-208ENST00000616527 CENPBP07199 599 aaPredicted RBP11.04□□□□□ -0.64
MALAT1-208ENST00000616527 COL9A1P20849 921 aa11.04□□□□□ -0.64
MALAT1-208ENST00000616527 NBPF8Q3BBV2 869 aa11.04□□□□□ -0.64
MALAT1-208ENST00000616527 ARHGEF1Q92888 912 aaKnown RBP11.04□□□□□ -0.64
MALAT1-208ENST00000616527 RBM33Q96EV2 1170 aaKnown RBP11.04□□□□□ -0.64
MALAT1-208ENST00000616527 EIF2AK4Q9P2K8 1649 aaKnown RBP11.04□□□□□ -0.64
MALAT1-208ENST00000616527 CCDC144AA2RUR9 1427 aa11.03□□□□□ -0.64
MALAT1-208ENST00000616527 PTPRTO14522 1441 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms