RNA–Protein interactions for RNA: ENST00000614703.4

SNX9-202, Transcript of sorting nexin 9, humanhuman

TSL 4

Gene SNX9, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-202ENST00000614703 PRAG1Q86YV5 1406 aa14.7□□□□□ -0.06
SNX9-202ENST00000614703 GJD4Q96KN9 370 aaPredicted RBP14.7□□□□□ -0.06
SNX9-202ENST00000614703 LRPPRCP42704 1394 aaKnown RBP14.7□□□□□ -0.06
SNX9-202ENST00000614703 MYOM2P54296 1465 aa14.69□□□□□ -0.06
SNX9-202ENST00000614703 SF3B2Q13435 895 aaKnown RBP14.69□□□□□ -0.06
SNX9-202ENST00000614703 BLMP54132 1417 aaPredicted RBP14.68□□□□□ -0.06
SNX9-202ENST00000614703 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.68□□□□□ -0.06
SNX9-202ENST00000614703 BCL9LQ86UU0 1499 aa14.68□□□□□ -0.06
SNX9-202ENST00000614703 CLTCL1P53675 1640 aa14.67□□□□□ -0.06
SNX9-202ENST00000614703 ESCO1Q5FWF5 840 aa14.67□□□□□ -0.06
SNX9-202ENST00000614703 ROBO2Q9HCK4 1378 aa14.67□□□□□ -0.06
SNX9-202ENST00000614703 RPGRIP1LQ68CZ1 1315 aa14.66□□□□□ -0.06
SNX9-202ENST00000614703 CDC42BPGQ6DT37 1551 aa14.65□□□□□ -0.06
SNX9-202ENST00000614703 UNC5CLQ8IV45 518 aa14.65□□□□□ -0.06
SNX9-202ENST00000614703 ITGAEP38570 1179 aa14.64□□□□□ -0.07
SNX9-202ENST00000614703 PXDNQ92626 1479 aa14.63□□□□□ -0.07
SNX9-202ENST00000614703 FOXO3O43524 673 aa14.62□□□□□ -0.07
SNX9-202ENST00000614703 LRP5O75197 1615 aa14.62□□□□□ -0.07
SNX9-202ENST00000614703 RALGAPBQ86X10 1494 aa14.62□□□□□ -0.07
SNX9-202ENST00000614703 SLIT2O94813 1529 aa14.61□□□□□ -0.07
SNX9-202ENST00000614703 GLI3P10071 1580 aa14.59□□□□□ -0.07
SNX9-202ENST00000614703 KIF1AQ12756 1690 aa14.58□□□□□ -0.07
SNX9-202ENST00000614703 CCDC144AA2RUR9 1427 aa14.58□□□□□ -0.07
SNX9-202ENST00000614703 PPLO60437 1756 aa14.58□□□□□ -0.08
SNX9-202ENST00000614703 BRWD3Q6RI45 1802 aa14.58□□□□□ -0.08
SNX9-202ENST00000614703 HAP1P54257 671 aaPredicted RBP14.58□□□□□ -0.08
SNX9-202ENST00000614703 NAIPQ13075 1403 aa14.58□□□□□ -0.08
SNX9-202ENST00000614703 USP32Q8NFA0 1604 aa14.57□□□□□ -0.08
SNX9-202ENST00000614703 XPCQ01831 940 aaPredicted RBP14.57□□□□□ -0.08
SNX9-202ENST00000614703 DEFB132Q7Z7B7 95 aa14.57□□□□□ -0.08
SNX9-202ENST00000614703 SEPT12Q8IYM1 358 aa14.57□□□□□ -0.08
SNX9-202ENST00000614703 SPATA31A3Q5VYP0 1347 aa14.57□□□□□ -0.08
SNX9-202ENST00000614703 NWD2Q9ULI1 1742 aa14.56□□□□□ -0.08
SNX9-202ENST00000614703 BAG6P46379 1132 aa14.56□□□□□ -0.08
SNX9-202ENST00000614703 VPS72Q15906 364 aa14.56□□□□□ -0.08
SNX9-202ENST00000614703 PSME1Q06323 249 aa14.55□□□□□ -0.08
SNX9-202ENST00000614703 KRT27Q7Z3Y8 459 aa14.55□□□□□ -0.08
SNX9-202ENST00000614703 TECPR2O15040 1411 aa14.55□□□□□ -0.08
SNX9-202ENST00000614703 ONECUT3O60422 494 aaPredicted RBP14.54□□□□□ -0.08
SNX9-202ENST00000614703 CCDC9Q9Y3X0 531 aaKnown RBP14.54□□□□□ -0.08
SNX9-202ENST00000614703 KRT28Q7Z3Y7 464 aa14.53□□□□□ -0.08
SNX9-202ENST00000614703 FMN2Q9NZ56 1722 aa14.52□□□□□ -0.08
SNX9-202ENST00000614703 NUTM2FA1L443 756 aa14.52□□□□□ -0.09
SNX9-202ENST00000614703 KNDC1Q76NI1 1749 aa14.52□□□□□ -0.09
SNX9-202ENST00000614703 TNS3Q68CZ2 1445 aa14.51□□□□□ -0.09
SNX9-202ENST00000614703 ABCC11Q96J66 1382 aa14.51□□□□□ -0.09
SNX9-202ENST00000614703 STK26Q9P289 416 aa14.51□□□□□ -0.09
SNX9-202ENST00000614703 PLCH1Q4KWH8 1693 aa14.51□□□□□ -0.09
SNX9-202ENST00000614703 ARHGEF10O15013 1369 aa14.5□□□□□ -0.09
SNX9-202ENST00000614703 A0A0G2JS52 829 aa14.5□□□□□ -0.09
SNX9-202ENST00000614703 MYT1Q01538 1121 aa14.5□□□□□ -0.09
SNX9-202ENST00000614703 WAPLQ7Z5K2 1190 aa14.5□□□□□ -0.09
SNX9-202ENST00000614703 SLC4A1APQ9BWU0 796 aaKnown RBP14.5□□□□□ -0.09
SNX9-202ENST00000614703 RRBP1Q9P2E9 1410 aaKnown RBP14.49□□□□□ -0.09
SNX9-202ENST00000614703 ANKRD30BQ9BXX2 1392 aa14.49□□□□□ -0.09
SNX9-202ENST00000614703 HRCP23327 699 aa14.49□□□□□ -0.09
SNX9-202ENST00000614703 SBNO1A3KN83 1393 aa14.48□□□□□ -0.09
SNX9-202ENST00000614703 SIRT1Q96EB6 747 aa14.48□□□□□ -0.09
SNX9-202ENST00000614703 PHF8Q9UPP1 1060 aa14.48□□□□□ -0.09
SNX9-202ENST00000614703 RGPD1P0DJD0 1748 aa14.48□□□□□ -0.09
SNX9-202ENST00000614703 PSDA5PKW4 1024 aaPredicted RBP14.47□□□□□ -0.09
SNX9-202ENST00000614703 LMOD2Q6P5Q4 547 aa14.46□□□□□ -0.09
SNX9-202ENST00000614703 IFT172Q9UG01 1749 aa14.46□□□□□ -0.1
SNX9-202ENST00000614703 ADGRF5Q8IZF2 1346 aa14.45□□□□□ -0.1
SNX9-202ENST00000614703 ABCA3Q99758 1704 aa14.45□□□□□ -0.1
SNX9-202ENST00000614703 YTHDC2Q9H6S0 1430 aaKnown RBP14.44□□□□□ -0.1
SNX9-202ENST00000614703 CABLES1Q8TDN4 633 aa14.44□□□□□ -0.1
SNX9-202ENST00000614703 RGPD8O14715 1765 aaPredicted RBP14.44□□□□□ -0.1
SNX9-202ENST00000614703 NRXN1Q9ULB1 1477 aa14.44□□□□□ -0.1
SNX9-202ENST00000614703 FAM98CQ17RN3 349 aaKnown RBP14.43□□□□□ -0.1
SNX9-202ENST00000614703 TMEM132EQ6IEE7 984 aa14.43□□□□□ -0.1
SNX9-202ENST00000614703 PLEKHH1Q9ULM0 1364 aa14.43□□□□□ -0.1
SNX9-202ENST00000614703 PIK3C2GO75747 1445 aa14.42□□□□□ -0.1
SNX9-202ENST00000614703 FAM83GA6ND36 823 aa14.42□□□□□ -0.1
SNX9-202ENST00000614703 EN1Q05925 392 aaPredicted RBP14.42□□□□□ -0.1
SNX9-202ENST00000614703 RGL3Q3MIN7 710 aa14.42□□□□□ -0.1
SNX9-202ENST00000614703 COL14A1Q05707 1796 aaKnown RBP14.42□□□□□ -0.1
SNX9-202ENST00000614703 DISP2A7MBM2 1401 aa14.41□□□□□ -0.1
SNX9-202ENST00000614703 NRAPQ86VF7 1730 aa14.41□□□□□ -0.1
SNX9-202ENST00000614703 PLEKHG5O94827 1062 aa14.41□□□□□ -0.1
SNX9-202ENST00000614703 BTG4Q9NY30 223 aa14.41□□□□□ -0.1
SNX9-202ENST00000614703 ADGRB2O60241 1585 aa14.4□□□□□ -0.1
SNX9-202ENST00000614703 DHX57Q6P158 1386 aaKnown RBP14.4□□□□□ -0.1
SNX9-202ENST00000614703 R3HDM1Q15032 1099 aaKnown RBP14.4□□□□□ -0.1
SNX9-202ENST00000614703 SPATA31E1Q6ZUB1 1445 aa14.4□□□□□ -0.1
SNX9-202ENST00000614703 ANKARQ7Z5J8 1434 aa14.4□□□□□ -0.1
SNX9-202ENST00000614703 GPRASP1Q5JY77 1395 aa14.39□□□□□ -0.11
SNX9-202ENST00000614703 PARD3Q8TEW0 1356 aa14.39□□□□□ -0.11
SNX9-202ENST00000614703 DCAF8L1A6NGE4 600 aa14.38□□□□□ -0.11
SNX9-202ENST00000614703 EIF3AQ14152 1382 aaKnown RBP14.37□□□□□ -0.11
SNX9-202ENST00000614703 PPARGC1BQ86YN6 1023 aaKnown RBP14.37□□□□□ -0.11
SNX9-202ENST00000614703 C14orf93Q9H972 538 aaKnown RBP14.37□□□□□ -0.11
SNX9-202ENST00000614703 SPATA31A5Q5VU36 1347 aa14.37□□□□□ -0.11
SNX9-202ENST00000614703 SPATA31A7Q8IWB4 1347 aa14.37□□□□□ -0.11
SNX9-202ENST00000614703 TNS1Q9HBL0 1735 aaKnown RBP14.36□□□□□ -0.11
SNX9-202ENST00000614703 FAM196AQ6ZSG2 479 aa14.36□□□□□ -0.11
SNX9-202ENST00000614703 POGKQ9P215 609 aa14.36□□□□□ -0.11
SNX9-202ENST00000614703 YY1P25490 414 aa14.35□□□□□ -0.11
SNX9-202ENST00000614703 PMFBP1Q8TBY8 1022 aa14.35□□□□□ -0.11
SNX9-202ENST00000614703 PRAM1Q96QH2 718 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms