RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 HMGXB3Q12766 1538 aa15.31■□□□□ 0.04
TNFAIP3-206ENST00000612899 C22orf23Q9BZE7 217 aa15.31■□□□□ 0.04
TNFAIP3-206ENST00000612899 CABP1Q9NZU7 370 aa15.31■□□□□ 0.04
TNFAIP3-206ENST00000612899 DNAJC5BQ9UF47 199 aa15.3■□□□□ 0.04
TNFAIP3-206ENST00000612899 DAPK1P53355 1430 aa15.3■□□□□ 0.04
TNFAIP3-206ENST00000612899 BCAR3O75815 825 aa15.3■□□□□ 0.04
TNFAIP3-206ENST00000612899 CREBRFQ8IUR6 639 aa15.3■□□□□ 0.04
TNFAIP3-206ENST00000612899 ATP6V1DQ9Y5K8 247 aa15.3■□□□□ 0.04
TNFAIP3-206ENST00000612899 NAIPQ13075 1403 aa15.3■□□□□ 0.04
TNFAIP3-206ENST00000612899 CHMP5Q9NZZ3 219 aa15.29■□□□□ 0.04
TNFAIP3-206ENST00000612899 PDE4CQ08493 712 aa15.29■□□□□ 0.04
TNFAIP3-206ENST00000612899 ABTB2Q8N961 1025 aa15.29■□□□□ 0.04
TNFAIP3-206ENST00000612899 AKNAQ7Z591 1439 aa15.29■□□□□ 0.04
TNFAIP3-206ENST00000612899 MCTP1Q6DN14 999 aa15.29■□□□□ 0.04
TNFAIP3-206ENST00000612899 ATF3P18847 181 aa15.28■□□□□ 0.04
TNFAIP3-206ENST00000612899 INTS3Q68E01 1043 aaKnown RBP15.28■□□□□ 0.04
TNFAIP3-206ENST00000612899 CDK13Q14004 1512 aaKnown RBP15.28■□□□□ 0.04
TNFAIP3-206ENST00000612899 AAMPQ13685 434 aa15.28■□□□□ 0.04
TNFAIP3-206ENST00000612899 WDR97A6NE52 1622 aa15.27■□□□□ 0.04
TNFAIP3-206ENST00000612899 SKOR2Q2VWA4 1001 aaPredicted RBP15.27■□□□□ 0.04
TNFAIP3-206ENST00000612899 CDK19Q9BWU1 502 aa15.27■□□□□ 0.04
TNFAIP3-206ENST00000612899 SLC52A1Q9NWF4 448 aa15.27■□□□□ 0.04
TNFAIP3-206ENST00000612899 RIC3Q7Z5B4 369 aa15.27■□□□□ 0.03
TNFAIP3-206ENST00000612899 UBTFL1P0CB47 393 aaPredicted RBP15.26■□□□□ 0.03
TNFAIP3-206ENST00000612899 APPP05067 770 aa15.26■□□□□ 0.03
TNFAIP3-206ENST00000612899 TWISTNBQ3B726 338 aaPredicted RBP15.26■□□□□ 0.03
TNFAIP3-206ENST00000612899 EPRSP07814 1512 aaKnown RBP15.25■□□□□ 0.03
TNFAIP3-206ENST00000612899 LRRFIP1Q32MZ4 808 aaKnown RBP15.25■□□□□ 0.03
TNFAIP3-206ENST00000612899 SULT6B1Q6IMI4 303 aa15.25■□□□□ 0.03
TNFAIP3-206ENST00000612899 C1orf115Q9H7X2 142 aa15.25■□□□□ 0.03
TNFAIP3-206ENST00000612899 HSP90AB4PQ58FF6 505 aa15.25■□□□□ 0.03
TNFAIP3-206ENST00000612899 ESCO1Q5FWF5 840 aa15.25■□□□□ 0.03
TNFAIP3-206ENST00000612899 PLEKHH2Q8IVE3 1493 aa15.25■□□□□ 0.03
TNFAIP3-206ENST00000612899 PDZRN3Q9UPQ7 1066 aa15.24■□□□□ 0.03
TNFAIP3-206ENST00000612899 PDE3AQ14432 1141 aa15.24■□□□□ 0.03
TNFAIP3-206ENST00000612899 CPLX2Q6PUV4 134 aaKnown RBP15.24■□□□□ 0.03
TNFAIP3-206ENST00000612899 SLC26A8Q96RN1 970 aa15.24■□□□□ 0.03
TNFAIP3-206ENST00000612899 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.24■□□□□ 0.03
TNFAIP3-206ENST00000612899 GAS2L2Q8NHY3 880 aa15.23■□□□□ 0.03
TNFAIP3-206ENST00000612899 AKAP17AQ02040 695 aaKnown RBP15.23■□□□□ 0.03
TNFAIP3-206ENST00000612899 NEUROD6Q96NK8 337 aa15.23■□□□□ 0.03
TNFAIP3-206ENST00000612899 KIAA0586Q9BVV6 1533 aa15.23■□□□□ 0.03
TNFAIP3-206ENST00000612899 DNMBPQ6XZF7 1577 aa15.23■□□□□ 0.03
TNFAIP3-206ENST00000612899 ERBINQ96RT1 1412 aa15.23■□□□□ 0.03
TNFAIP3-206ENST00000612899 VPS37CA5D8V6 355 aaPredicted RBP15.23■□□□□ 0.03
TNFAIP3-206ENST00000612899 C11orf95C9JLR9 678 aaPredicted RBP15.23■□□□□ 0.03
TNFAIP3-206ENST00000612899 RNF20Q5VTR2 975 aa15.23■□□□□ 0.03
TNFAIP3-206ENST00000612899 BECN2A8MW95 431 aa15.22■□□□□ 0.03
TNFAIP3-206ENST00000612899 SURF6O75683 361 aaKnown RBP15.22■□□□□ 0.03
TNFAIP3-206ENST00000612899 HECW1Q76N89 1606 aa15.22■□□□□ 0.03
TNFAIP3-206ENST00000612899 SYNE3Q6ZMZ3 975 aa15.22■□□□□ 0.03
TNFAIP3-206ENST00000612899 CPLX1O14810 134 aa15.22■□□□□ 0.03
TNFAIP3-206ENST00000612899 ERC2O15083 957 aa15.22■□□□□ 0.03
TNFAIP3-206ENST00000612899 CDC45O75419 566 aa15.22■□□□□ 0.03
TNFAIP3-206ENST00000612899 NOB1Q9ULX3 412 aaKnown RBP15.22■□□□□ 0.03
TNFAIP3-206ENST00000612899 TNNT3P45378 269 aaPredicted RBP15.22■□□□□ 0.03
TNFAIP3-206ENST00000612899 CHMP4CQ96CF2 233 aa15.22■□□□□ 0.03
TNFAIP3-206ENST00000612899 MARCH6O60337 910 aa15.21■□□□□ 0.03
TNFAIP3-206ENST00000612899 NFKBIBQ15653 356 aa15.21■□□□□ 0.03
TNFAIP3-206ENST00000612899 GOLGA6L19H0YKK7 550 aa15.21■□□□□ 0.03
TNFAIP3-206ENST00000612899 GNAI3P08754 354 aa15.21■□□□□ 0.03
TNFAIP3-206ENST00000612899 CCDC30Q5VVM6 783 aa15.21■□□□□ 0.03
TNFAIP3-206ENST00000612899 MSH5O43196 834 aa15.2■□□□□ 0.02
TNFAIP3-206ENST00000612899 GPRASP1Q5JY77 1395 aa15.2■□□□□ 0.02
TNFAIP3-206ENST00000612899 SMC3Q9UQE7 1217 aa15.2■□□□□ 0.02
TNFAIP3-206ENST00000612899 ABCA10Q8WWZ4 1543 aa15.2■□□□□ 0.02
TNFAIP3-206ENST00000612899 SLC4A2P04920 1241 aa15.19■□□□□ 0.02
TNFAIP3-206ENST00000612899 PROSER2Q86WR7 435 aaPredicted RBP15.19■□□□□ 0.02
TNFAIP3-206ENST00000612899 CLASRPQ8N2M8 674 aaKnown RBP15.19■□□□□ 0.02
TNFAIP3-206ENST00000612899 TRDNQ13061 729 aa15.19■□□□□ 0.02
TNFAIP3-206ENST00000612899 PES1O00541 588 aaKnown RBP15.19■□□□□ 0.02
TNFAIP3-206ENST00000612899 NUCB2P80303 420 aa15.19■□□□□ 0.02
TNFAIP3-206ENST00000612899 ARHGEF11O15085 1522 aa15.19■□□□□ 0.02
TNFAIP3-206ENST00000612899 NCBP3Q53F19 620 aaKnown RBP15.18■□□□□ 0.02
TNFAIP3-206ENST00000612899 VPS37DQ86XT2 251 aa15.18■□□□□ 0.02
TNFAIP3-206ENST00000612899 ZNF692Q9BU19 519 aaPredicted RBP15.18■□□□□ 0.02
TNFAIP3-206ENST00000612899 SUPT6HQ7KZ85 1726 aaKnown RBP15.18■□□□□ 0.02
TNFAIP3-206ENST00000612899 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.18■□□□□ 0.02
TNFAIP3-206ENST00000612899 RRS1Q15050 365 aaKnown RBP15.18■□□□□ 0.02
TNFAIP3-206ENST00000612899 VPS53Q5VIR6 699 aa15.18■□□□□ 0.02
TNFAIP3-206ENST00000612899 ANKRD30BQ9BXX2 1392 aa15.18■□□□□ 0.02
TNFAIP3-206ENST00000612899 THEMISQ8N1K5 641 aaPredicted RBP15.18■□□□□ 0.02
TNFAIP3-206ENST00000612899 BICD2Q8TD16 824 aa15.18■□□□□ 0.02
TNFAIP3-206ENST00000612899 HDGFL1Q5TGJ6 251 aa15.17■□□□□ 0.02
TNFAIP3-206ENST00000612899 WDR63Q8IWG1 891 aa15.17■□□□□ 0.02
TNFAIP3-206ENST00000612899 PLB1Q6P1J6 1458 aa15.17■□□□□ 0.02
TNFAIP3-206ENST00000612899 PLEKHO1Q53GL0 409 aaPredicted RBP15.17■□□□□ 0.02
TNFAIP3-206ENST00000612899 ATF7IPQ6VMQ6 1270 aa15.17■□□□□ 0.02
TNFAIP3-206ENST00000612899 RRP9O43818 475 aaKnown RBP15.16■□□□□ 0.02
TNFAIP3-206ENST00000612899 FOSBP53539 338 aa15.16■□□□□ 0.02
TNFAIP3-206ENST00000612899 TRIM29Q14134 588 aa15.16■□□□□ 0.02
TNFAIP3-206ENST00000612899 RTEL1-TNFRSF6BF6WH68 1400 aa15.16■□□□□ 0.02
TNFAIP3-206ENST00000612899 WASHC4Q2M389 1173 aa15.15■□□□□ 0.02
TNFAIP3-206ENST00000612899 ZNF428Q96B54 188 aa15.15■□□□□ 0.02
TNFAIP3-206ENST00000612899 TPD52L1Q16890 204 aaPredicted RBP15.15■□□□□ 0.02
TNFAIP3-206ENST00000612899 RPGRIP1LQ68CZ1 1315 aa15.15■□□□□ 0.02
TNFAIP3-206ENST00000612899 PCF11O94913 1555 aaKnown RBP15.14■□□□□ 0.01
TNFAIP3-206ENST00000612899 RAD21O60216 631 aa15.14■□□□□ 0.01
TNFAIP3-206ENST00000612899 NEK4P51957 841 aa15.14■□□□□ 0.01
TNFAIP3-206ENST00000612899 IL27Q8NEV9 243 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms