RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 RRP1P56182 461 aaKnown RBP19.72■□□□□ 0.75
PPFIA3-206ENST00000602655 CABP1Q9NZU7 370 aa19.72■□□□□ 0.75
PPFIA3-206ENST00000602655 KDM5CP41229 1560 aa19.72■□□□□ 0.75
PPFIA3-206ENST00000602655 C14orf37Q86TY3 774 aa19.72■□□□□ 0.75
PPFIA3-206ENST00000602655 ARID3AQ99856 593 aa19.72■□□□□ 0.75
PPFIA3-206ENST00000602655 FRMPD1Q5SYB0 1578 aa19.72■□□□□ 0.75
PPFIA3-206ENST00000602655 SMG6Q86US8 1419 aaKnown RBP19.71■□□□□ 0.75
PPFIA3-206ENST00000602655 ZBTB7CA1YPR0 619 aa19.71■□□□□ 0.75
PPFIA3-206ENST00000602655 PPP2R1AP30153 589 aa19.71■□□□□ 0.75
PPFIA3-206ENST00000602655 RCAN3Q9UKA8 241 aa19.71■□□□□ 0.75
PPFIA3-206ENST00000602655 CDK19Q9BWU1 502 aa19.69■□□□□ 0.74
PPFIA3-206ENST00000602655 SCAF11Q99590 1463 aaKnown RBP19.69■□□□□ 0.74
PPFIA3-206ENST00000602655 PPRC1Q5VV67 1664 aaKnown RBP19.68■□□□□ 0.74
PPFIA3-206ENST00000602655 ABCC3O15438 1527 aa19.68■□□□□ 0.74
PPFIA3-206ENST00000602655 EVC2Q86UK5 1308 aa19.67■□□□□ 0.74
PPFIA3-206ENST00000602655 DIP2BQ9P265 1576 aa19.67■□□□□ 0.74
PPFIA3-206ENST00000602655 MAGI2Q86UL8 1455 aa19.67■□□□□ 0.74
PPFIA3-206ENST00000602655 TRPM2O94759 1503 aa19.67■□□□□ 0.74
PPFIA3-206ENST00000602655 PMFBP1Q8TBY8 1022 aa19.66■□□□□ 0.74
PPFIA3-206ENST00000602655 DIP2CQ9Y2E4 1556 aa19.66■□□□□ 0.74
PPFIA3-206ENST00000602655 NUTM2GQ5VZR2 741 aa19.66■□□□□ 0.74
PPFIA3-206ENST00000602655 LTKP29376 864 aa19.66■□□□□ 0.74
PPFIA3-206ENST00000602655 APAF1O14727 1248 aa19.65■□□□□ 0.74
PPFIA3-206ENST00000602655 AMER1Q5JTC6 1135 aaPredicted RBP19.65■□□□□ 0.74
PPFIA3-206ENST00000602655 EFCAB6Q5THR3 1501 aa19.65■□□□□ 0.74
PPFIA3-206ENST00000602655 GPRASP1Q5JY77 1395 aa19.64■□□□□ 0.73
PPFIA3-206ENST00000602655 GOLGA6L3A6NEY3 463 aa19.64■□□□□ 0.73
PPFIA3-206ENST00000602655 ZRANB1Q9UGI0 708 aa19.64■□□□□ 0.73
PPFIA3-206ENST00000602655 MTHFSP49914 203 aa19.63■□□□□ 0.73
PPFIA3-206ENST00000602655 MROH1Q8NDA8 1641 aa19.63■□□□□ 0.73
PPFIA3-206ENST00000602655 LMOD2Q6P5Q4 547 aa19.62■□□□□ 0.73
PPFIA3-206ENST00000602655 U2AF1L5P0DN76 240 aaPredicted RBP19.62■□□□□ 0.73
PPFIA3-206ENST00000602655 U2AF1Q01081 240 aaKnown RBP eCLIP19.62■□□□□ 0.73
PPFIA3-206ENST00000602655 EID1Q9Y6B2 187 aa19.62■□□□□ 0.73
PPFIA3-206ENST00000602655 PLEKHH1Q9ULM0 1364 aa19.62■□□□□ 0.73
PPFIA3-206ENST00000602655 SPRYD3Q8NCJ5 442 aa19.61■□□□□ 0.73
PPFIA3-206ENST00000602655 TRIM44Q96DX7 344 aaPredicted RBP19.61■□□□□ 0.73
PPFIA3-206ENST00000602655 TET3O43151 1660 aa19.61■□□□□ 0.73
PPFIA3-206ENST00000602655 RNF17Q9BXT8 1623 aaKnown RBP19.6■□□□□ 0.73
PPFIA3-206ENST00000602655 RPGRIP1LQ68CZ1 1315 aa19.6■□□□□ 0.73
PPFIA3-206ENST00000602655 PANK2Q9BZ23 570 aa19.6■□□□□ 0.73
PPFIA3-206ENST00000602655 SPHKAPQ2M3C7 1700 aa19.6■□□□□ 0.73
PPFIA3-206ENST00000602655 STAC3Q96MF2 364 aa19.59■□□□□ 0.73
PPFIA3-206ENST00000602655 NSD3Q9BZ95 1437 aa19.59■□□□□ 0.73
PPFIA3-206ENST00000602655 RNF123Q5XPI4 1314 aa19.58■□□□□ 0.73
PPFIA3-206ENST00000602655 CRBNQ96SW2 442 aa19.58■□□□□ 0.72
PPFIA3-206ENST00000602655 TRPM1Q7Z4N2 1603 aa19.57■□□□□ 0.72
PPFIA3-206ENST00000602655 CLCN1P35523 988 aa19.57■□□□□ 0.72
PPFIA3-206ENST00000602655 PDE4CQ08493 712 aa19.56■□□□□ 0.72
PPFIA3-206ENST00000602655 TNRQ92752 1358 aa19.56■□□□□ 0.72
PPFIA3-206ENST00000602655 FAM161AQ3B820 660 aa19.55■□□□□ 0.72
PPFIA3-206ENST00000602655 RIMS2Q9UQ26 1411 aa19.55■□□□□ 0.72
PPFIA3-206ENST00000602655 XRCC6P12956 609 aaKnown RBP eCLIP19.55■□□□□ 0.72
PPFIA3-206ENST00000602655 HDGFP51858 240 aaKnown RBP19.54■□□□□ 0.72
PPFIA3-206ENST00000602655 AAMPQ13685 434 aa19.54■□□□□ 0.72
PPFIA3-206ENST00000602655 HDGFL2Q7Z4V5 671 aaPredicted RBP19.54■□□□□ 0.72
PPFIA3-206ENST00000602655 CFAP74Q9C0B2 1584 aa19.54■□□□□ 0.72
PPFIA3-206ENST00000602655 METP08581 1390 aa19.54■□□□□ 0.72
PPFIA3-206ENST00000602655 XPCQ01831 940 aaPredicted RBP19.53■□□□□ 0.72
PPFIA3-206ENST00000602655 MYH16Q9H6N6 1097 aa19.53■□□□□ 0.72
PPFIA3-206ENST00000602655 MAP3K4Q9Y6R4 1608 aa19.52■□□□□ 0.72
PPFIA3-206ENST00000602655 RRS1Q15050 365 aaKnown RBP19.52■□□□□ 0.72
PPFIA3-206ENST00000602655 BCL2L13Q9BXK5 485 aa19.52■□□□□ 0.72
PPFIA3-206ENST00000602655 CGNL1Q0VF96 1302 aa19.52■□□□□ 0.72
PPFIA3-206ENST00000602655 HMOX1P09601 288 aa19.52■□□□□ 0.72
PPFIA3-206ENST00000602655 BECN1Q14457 450 aa19.52■□□□□ 0.72
PPFIA3-206ENST00000602655 NME9Q86XW9 330 aa19.52■□□□□ 0.71
PPFIA3-206ENST00000602655 TERF2IPQ9NYB0 399 aa19.52■□□□□ 0.71
PPFIA3-206ENST00000602655 AMOTL2Q9Y2J4 779 aa19.52■□□□□ 0.71
PPFIA3-206ENST00000602655 BRD4O60885 1362 aaPredicted RBP19.51■□□□□ 0.71
PPFIA3-206ENST00000602655 HSPA2P54652 639 aa19.5■□□□□ 0.71
PPFIA3-206ENST00000602655 FGD1P98174 961 aa19.49■□□□□ 0.71
PPFIA3-206ENST00000602655 FAM13BQ9NYF5 915 aa19.49■□□□□ 0.71
PPFIA3-206ENST00000602655 PIK3C2GO75747 1445 aa19.49■□□□□ 0.71
PPFIA3-206ENST00000602655 MROH2AA6NES4 1674 aa19.49■□□□□ 0.71
PPFIA3-206ENST00000602655 PDCL3Q9H2J4 239 aa19.49■□□□□ 0.71
PPFIA3-206ENST00000602655 DNAJC5Q9H3Z4 198 aa19.49■□□□□ 0.71
PPFIA3-206ENST00000602655 MADDQ8WXG6 1647 aa19.49■□□□□ 0.71
PPFIA3-206ENST00000602655 NGDNQ8NEJ9 315 aaKnown RBP19.49■□□□□ 0.71
PPFIA3-206ENST00000602655 RICTORQ6R327 1708 aa19.49■□□□□ 0.71
PPFIA3-206ENST00000602655 PARD3Q8TEW0 1356 aa19.48■□□□□ 0.71
PPFIA3-206ENST00000602655 ERVK-7P63135 1459 aa19.48■□□□□ 0.71
PPFIA3-206ENST00000602655 NUDT16Q96DE0 195 aaKnown RBP19.48■□□□□ 0.71
PPFIA3-206ENST00000602655 VWDEQ8N2E2 1590 aa19.48■□□□□ 0.71
PPFIA3-206ENST00000602655 KIF1BO60333 1816 aa19.48■□□□□ 0.71
PPFIA3-206ENST00000602655 ESPNB1AK53 854 aa19.48■□□□□ 0.71
PPFIA3-206ENST00000602655 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.47■□□□□ 0.71
PPFIA3-206ENST00000602655 LTV1Q96GA3 475 aaPredicted RBP19.47■□□□□ 0.71
PPFIA3-206ENST00000602655 DEPDC5O75140 1603 aa19.46■□□□□ 0.71
PPFIA3-206ENST00000602655 CFAP53Q96M91 514 aa19.46■□□□□ 0.71
PPFIA3-206ENST00000602655 YTHDC2Q9H6S0 1430 aaKnown RBP19.46■□□□□ 0.71
PPFIA3-206ENST00000602655 SYNMO15061 1565 aa19.46■□□□□ 0.71
PPFIA3-206ENST00000602655 DMRT2Q9Y5R5 561 aa19.46■□□□□ 0.71
PPFIA3-206ENST00000602655 FYB1O15117 783 aa19.45■□□□□ 0.7
PPFIA3-206ENST00000602655 THEMISQ8N1K5 641 aaPredicted RBP19.45■□□□□ 0.7
PPFIA3-206ENST00000602655 CANXP27824 592 aaKnown RBP19.45■□□□□ 0.7
PPFIA3-206ENST00000602655 EMILIN1Q9Y6C2 1016 aa19.45■□□□□ 0.7
PPFIA3-206ENST00000602655 SIGLEC1Q9BZZ2 1709 aa19.44■□□□□ 0.7
PPFIA3-206ENST00000602655 SPINK5Q9NQ38 1064 aaPredicted RBP19.44■□□□□ 0.7
PPFIA3-206ENST00000602655 CAMSAP1Q5T5Y3 1602 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms