RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 KNDC1Q76NI1 1749 aa31.67■■■□□ 2.66
PNKP-212ENST00000599454 FOXD1Q16676 465 aa31.67■■■□□ 2.66
PNKP-212ENST00000599454 RGS12O14924 1447 aa31.66■■■□□ 2.66
PNKP-212ENST00000599454 SPATA31E1Q6ZUB1 1445 aa31.66■■■□□ 2.66
PNKP-212ENST00000599454 ADAMTS2O95450 1211 aa31.66■■■□□ 2.66
PNKP-212ENST00000599454 TECPR2O15040 1411 aa31.66■■■□□ 2.66
PNKP-212ENST00000599454 ADGRF5Q8IZF2 1346 aa31.65■■■□□ 2.66
PNKP-212ENST00000599454 NPHP3Q7Z494 1330 aa31.64■■■□□ 2.66
PNKP-212ENST00000599454 MARF1Q9Y4F3 1742 aaKnown RBP31.62■■■□□ 2.65
PNKP-212ENST00000599454 LRPPRCP42704 1394 aaKnown RBP31.61■■■□□ 2.65
PNKP-212ENST00000599454 MPHOSPH9Q99550 1183 aa31.61■■■□□ 2.65
PNKP-212ENST00000599454 ESCO1Q5FWF5 840 aa31.6■■■□□ 2.65
PNKP-212ENST00000599454 ACIN1Q9UKV3 1341 aaKnown RBP31.59■■■□□ 2.65
PNKP-212ENST00000599454 RGL3Q3MIN7 710 aa31.59■■■□□ 2.65
PNKP-212ENST00000599454 PXDNQ92626 1479 aa31.59■■■□□ 2.65
PNKP-212ENST00000599454 ABCC11Q96J66 1382 aa31.58■■■□□ 2.65
PNKP-212ENST00000599454 USP21Q9UK80 565 aa31.58■■■□□ 2.65
PNKP-212ENST00000599454 FNBP4Q8N3X1 1017 aaPredicted RBP31.57■■■□□ 2.64
PNKP-212ENST00000599454 MYOM2P54296 1465 aa31.57■■■□□ 2.64
PNKP-212ENST00000599454 PIK3C2GO75747 1445 aa31.57■■■□□ 2.64
PNKP-212ENST00000599454 TRPC5Q9UL62 973 aaPredicted RBP31.56■■■□□ 2.64
PNKP-212ENST00000599454 FMN2Q9NZ56 1722 aa31.55■■■□□ 2.64
PNKP-212ENST00000599454 STK26Q9P289 416 aa31.55■■■□□ 2.64
PNKP-212ENST00000599454 WAPLQ7Z5K2 1190 aa31.53■■■□□ 2.64
PNKP-212ENST00000599454 KIF1AQ12756 1690 aa31.53■■■□□ 2.64
PNKP-212ENST00000599454 ATRNO75882 1429 aa31.51■■■□□ 2.64
PNKP-212ENST00000599454 FOXO3O43524 673 aa31.51■■■□□ 2.63
PNKP-212ENST00000599454 YTHDC2Q9H6S0 1430 aaKnown RBP31.5■■■□□ 2.63
PNKP-212ENST00000599454 ATAD2Q6PL18 1390 aa31.49■■■□□ 2.63
PNKP-212ENST00000599454 TMEM132EQ6IEE7 984 aa31.49■■■□□ 2.63
PNKP-212ENST00000599454 PLEKHH1Q9ULM0 1364 aa31.47■■■□□ 2.63
PNKP-212ENST00000599454 SIRT1Q96EB6 747 aa31.47■■■□□ 2.63
PNKP-212ENST00000599454 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.46■■■□□ 2.63
PNKP-212ENST00000599454 RGPD8O14715 1765 aaPredicted RBP31.44■■■□□ 2.62
PNKP-212ENST00000599454 NUTM2FA1L443 756 aa31.44■■■□□ 2.62
PNKP-212ENST00000599454 XPCQ01831 940 aaPredicted RBP31.44■■■□□ 2.62
PNKP-212ENST00000599454 NRXN1Q9ULB1 1477 aa31.44■■■□□ 2.62
PNKP-212ENST00000599454 BCL9LQ86UU0 1499 aa31.43■■■□□ 2.62
PNKP-212ENST00000599454 C14orf93Q9H972 538 aaKnown RBP31.42■■■□□ 2.62
PNKP-212ENST00000599454 DHX57Q6P158 1386 aaKnown RBP31.39■■■□□ 2.62
PNKP-212ENST00000599454 SPATA31A3Q5VYP0 1347 aa31.38■■■□□ 2.61
PNKP-212ENST00000599454 USP32Q8NFA0 1604 aa31.35■■■□□ 2.61
PNKP-212ENST00000599454 KRT28Q7Z3Y7 464 aa31.33■■■□□ 2.61
PNKP-212ENST00000599454 GJD4Q96KN9 370 aaPredicted RBP31.33■■■□□ 2.61
PNKP-212ENST00000599454 CFAP70Q5T0N1 1121 aa31.32■■■□□ 2.6
PNKP-212ENST00000599454 SLIT2O94813 1529 aa31.32■■■□□ 2.6
PNKP-212ENST00000599454 DLC1Q96QB1 1528 aa31.32■■■□□ 2.6
PNKP-212ENST00000599454 PHF8Q9UPP1 1060 aa31.31■■■□□ 2.6
PNKP-212ENST00000599454 TNS3Q68CZ2 1445 aa31.31■■■□□ 2.6
PNKP-212ENST00000599454 PSME1Q06323 249 aa31.3■■■□□ 2.6
PNKP-212ENST00000599454 UNC5CLQ8IV45 518 aa31.3■■■□□ 2.6
PNKP-212ENST00000599454 CCDC125Q86Z20 511 aa31.29■■■□□ 2.6
PNKP-212ENST00000599454 NWD2Q9ULI1 1742 aa31.27■■■□□ 2.6
PNKP-212ENST00000599454 ADGRB2O60241 1585 aa31.26■■■□□ 2.6
PNKP-212ENST00000599454 PRAM1Q96QH2 718 aa31.26■■■□□ 2.59
PNKP-212ENST00000599454 SBNO1A3KN83 1393 aa31.26■■■□□ 2.59
PNKP-212ENST00000599454 ABCA3Q99758 1704 aa31.26■■■□□ 2.59
PNKP-212ENST00000599454 GLI3P10071 1580 aa31.26■■■□□ 2.59
PNKP-212ENST00000599454 ANKARQ7Z5J8 1434 aa31.25■■■□□ 2.59
PNKP-212ENST00000599454 RALGAPBQ86X10 1494 aa31.25■■■□□ 2.59
PNKP-212ENST00000599454 RAB3GAP2Q9H2M9 1393 aa31.24■■■□□ 2.59
PNKP-212ENST00000599454 PLCH1Q4KWH8 1693 aa31.23■■■□□ 2.59
PNKP-212ENST00000599454 BRWD3Q6RI45 1802 aa31.22■■■□□ 2.59
PNKP-212ENST00000599454 ARHGEF10O15013 1369 aa31.22■■■□□ 2.59
PNKP-212ENST00000599454 HAP1P54257 671 aaPredicted RBP31.22■■■□□ 2.59
PNKP-212ENST00000599454 POGKQ9P215 609 aa31.22■■■□□ 2.59
PNKP-212ENST00000599454 ADGRB1O14514 1584 aa31.22■■■□□ 2.59
PNKP-212ENST00000599454 SAFB2Q14151 953 aaKnown RBP eCLIP31.2■■■□□ 2.59
PNKP-212ENST00000599454 EP400Q96L91 3159 aa31.19■■■□□ 2.58
PNKP-212ENST00000599454 ZRANB1Q9UGI0 708 aa31.16■■■□□ 2.58
PNKP-212ENST00000599454 EIF3AQ14152 1382 aaKnown RBP31.16■■■□□ 2.58
PNKP-212ENST00000599454 TRPM3Q9HCF6 1732 aaPredicted RBP31.15■■■□□ 2.58
PNKP-212ENST00000599454 VPS72Q15906 364 aa31.15■■■□□ 2.58
PNKP-212ENST00000599454 CABLES1Q8TDN4 633 aa31.14■■■□□ 2.58
PNKP-212ENST00000599454 STAC3Q96MF2 364 aa31.14■■■□□ 2.58
PNKP-212ENST00000599454 LMOD2Q6P5Q4 547 aa31.13■■■□□ 2.57
PNKP-212ENST00000599454 BLMP54132 1417 aaPredicted RBP31.12■■■□□ 2.57
PNKP-212ENST00000599454 PMFBP1Q8TBY8 1022 aa31.11■■■□□ 2.57
PNKP-212ENST00000599454 ALS2Q96Q42 1657 aa31.11■■■□□ 2.57
PNKP-212ENST00000599454 TULP4Q9NRJ4 1543 aa31.1■■■□□ 2.57
PNKP-212ENST00000599454 TRAK1Q9UPV9 953 aa31.1■■■□□ 2.57
PNKP-212ENST00000599454 GPRASP1Q5JY77 1395 aa31.08■■■□□ 2.57
PNKP-212ENST00000599454 NRAPQ86VF7 1730 aa31.07■■■□□ 2.56
PNKP-212ENST00000599454 ONECUT3O60422 494 aaPredicted RBP31.07■■■□□ 2.56
PNKP-212ENST00000599454 SEPT12Q8IYM1 358 aa31.07■■■□□ 2.56
PNKP-212ENST00000599454 DCAF11Q8TEB1 546 aa31.07■■■□□ 2.56
PNKP-212ENST00000599454 ITSN1Q15811 1721 aa31.06■■■□□ 2.56
PNKP-212ENST00000599454 COL14A1Q05707 1796 aaKnown RBP31.05■■■□□ 2.56
PNKP-212ENST00000599454 PLEKHG5O94827 1062 aa31.05■■■□□ 2.56
PNKP-212ENST00000599454 HIRIP3Q9BW71 556 aaPredicted RBP31.05■■■□□ 2.56
PNKP-212ENST00000599454 KDM2AQ9Y2K7 1162 aa31.05■■■□□ 2.56
PNKP-212ENST00000599454 CCDC9Q9Y3X0 531 aaKnown RBP31.05■■■□□ 2.56
PNKP-212ENST00000599454 ARHGEF28Q8N1W1 1705 aaKnown RBP31.04■■■□□ 2.56
PNKP-212ENST00000599454 MINK1Q8N4C8 1332 aaPredicted RBP31.04■■■□□ 2.56
PNKP-212ENST00000599454 FAM83GA6ND36 823 aa31.03■■■□□ 2.56
PNKP-212ENST00000599454 WASLO00401 505 aaPredicted RBP31.03■■■□□ 2.56
PNKP-212ENST00000599454 HRCP23327 699 aa31.03■■■□□ 2.56
PNKP-212ENST00000599454 CRYBG1Q9Y4K1 1723 aa31.01■■■□□ 2.56
PNKP-212ENST00000599454 PRR36Q9H6K5 1346 aa31.01■■■□□ 2.56
PNKP-212ENST00000599454 SF3B2Q13435 895 aaKnown RBP31■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms