RNA–Protein interactions for RNA: ENST00000597400.5

ZNF548-207, Transcript of zinc finger protein 548, humanhuman

TSL 3 BASIC

Gene ZNF548, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-207ENST00000597400 FNBP4Q8N3X1 1017 aaPredicted RBP16.86■□□□□ 0.29
ZNF548-207ENST00000597400 PXDNQ92626 1479 aa16.86■□□□□ 0.29
ZNF548-207ENST00000597400 GLI3P10071 1580 aa16.85■□□□□ 0.29
ZNF548-207ENST00000597400 CDC42BPGQ6DT37 1551 aa16.85■□□□□ 0.29
ZNF548-207ENST00000597400 TRPC5Q9UL62 973 aaPredicted RBP16.84■□□□□ 0.29
ZNF548-207ENST00000597400 ITGAEP38570 1179 aa16.81■□□□□ 0.28
ZNF548-207ENST00000597400 ZRANB1Q9UGI0 708 aa16.79■□□□□ 0.28
ZNF548-207ENST00000597400 ABCA3Q99758 1704 aa16.79■□□□□ 0.28
ZNF548-207ENST00000597400 USP32Q8NFA0 1604 aa16.78■□□□□ 0.28
ZNF548-207ENST00000597400 RGPD8O14715 1765 aaPredicted RBP16.78■□□□□ 0.28
ZNF548-207ENST00000597400 FMN2Q9NZ56 1722 aa16.78■□□□□ 0.28
ZNF548-207ENST00000597400 IFT172Q9UG01 1749 aa16.78■□□□□ 0.28
ZNF548-207ENST00000597400 PLCH1Q4KWH8 1693 aa16.78■□□□□ 0.28
ZNF548-207ENST00000597400 HFM1A2PYH4 1435 aa16.78■□□□□ 0.28
ZNF548-207ENST00000597400 LRP5O75197 1615 aa16.78■□□□□ 0.28
ZNF548-207ENST00000597400 KNDC1Q76NI1 1749 aa16.77■□□□□ 0.28
ZNF548-207ENST00000597400 RALGAPBQ86X10 1494 aa16.76■□□□□ 0.27
ZNF548-207ENST00000597400 SLIT2O94813 1529 aa16.75■□□□□ 0.27
ZNF548-207ENST00000597400 XPCQ01831 940 aaPredicted RBP16.75■□□□□ 0.27
ZNF548-207ENST00000597400 KIF1AQ12756 1690 aa16.74■□□□□ 0.27
ZNF548-207ENST00000597400 NPHP3Q7Z494 1330 aa16.73■□□□□ 0.27
ZNF548-207ENST00000597400 GJD4Q96KN9 370 aaPredicted RBP16.73■□□□□ 0.27
ZNF548-207ENST00000597400 BLMP54132 1417 aaPredicted RBP16.72■□□□□ 0.27
ZNF548-207ENST00000597400 NAIPQ13075 1403 aa16.72■□□□□ 0.27
ZNF548-207ENST00000597400 NWD2Q9ULI1 1742 aa16.72■□□□□ 0.27
ZNF548-207ENST00000597400 ESCO1Q5FWF5 840 aa16.71■□□□□ 0.27
ZNF548-207ENST00000597400 CCDC125Q86Z20 511 aa16.71■□□□□ 0.27
ZNF548-207ENST00000597400 FOXO3O43524 673 aa16.7■□□□□ 0.26
ZNF548-207ENST00000597400 DEFB132Q7Z7B7 95 aa16.7■□□□□ 0.26
ZNF548-207ENST00000597400 TECPR2O15040 1411 aa16.7■□□□□ 0.26
ZNF548-207ENST00000597400 VGFO15240 615 aaPredicted RBP16.69■□□□□ 0.26
ZNF548-207ENST00000597400 NRAPQ86VF7 1730 aa16.69■□□□□ 0.26
ZNF548-207ENST00000597400 PLEKHH1Q9ULM0 1364 aa16.68■□□□□ 0.26
ZNF548-207ENST00000597400 NUTM2FA1L443 756 aa16.68■□□□□ 0.26
ZNF548-207ENST00000597400 PPARGC1BQ86YN6 1023 aaKnown RBP16.68■□□□□ 0.26
ZNF548-207ENST00000597400 FOXD1Q16676 465 aa16.67■□□□□ 0.26
ZNF548-207ENST00000597400 UNC5CLQ8IV45 518 aa16.66■□□□□ 0.26
ZNF548-207ENST00000597400 SPATA31A3Q5VYP0 1347 aa16.65■□□□□ 0.26
ZNF548-207ENST00000597400 RRBP1Q9P2E9 1410 aaKnown RBP16.64■□□□□ 0.25
ZNF548-207ENST00000597400 WAPLQ7Z5K2 1190 aa16.64■□□□□ 0.25
ZNF548-207ENST00000597400 RPGRIP1LQ68CZ1 1315 aa16.64■□□□□ 0.25
ZNF548-207ENST00000597400 ADGRF5Q8IZF2 1346 aa16.64■□□□□ 0.25
ZNF548-207ENST00000597400 TNS1Q9HBL0 1735 aaKnown RBP16.63■□□□□ 0.25
ZNF548-207ENST00000597400 LRPPRCP42704 1394 aaKnown RBP16.63■□□□□ 0.25
ZNF548-207ENST00000597400 CCDC144AA2RUR9 1427 aa16.62■□□□□ 0.25
ZNF548-207ENST00000597400 RGPD1P0DJD0 1748 aa16.62■□□□□ 0.25
ZNF548-207ENST00000597400 TRPM3Q9HCF6 1732 aaPredicted RBP16.62■□□□□ 0.25
ZNF548-207ENST00000597400 TNS3Q68CZ2 1445 aa16.62■□□□□ 0.25
ZNF548-207ENST00000597400 SEPT12Q8IYM1 358 aa16.61■□□□□ 0.25
ZNF548-207ENST00000597400 CRYBG1Q9Y4K1 1723 aa16.61■□□□□ 0.25
ZNF548-207ENST00000597400 SPATA31E1Q6ZUB1 1445 aa16.61■□□□□ 0.25
ZNF548-207ENST00000597400 STK26Q9P289 416 aa16.6■□□□□ 0.25
ZNF548-207ENST00000597400 PIK3C2GO75747 1445 aa16.6■□□□□ 0.25
ZNF548-207ENST00000597400 CABLES1Q8TDN4 633 aa16.59■□□□□ 0.25
ZNF548-207ENST00000597400 ALS2Q96Q42 1657 aa16.59■□□□□ 0.25
ZNF548-207ENST00000597400 PSDA5PKW4 1024 aaPredicted RBP16.58■□□□□ 0.24
ZNF548-207ENST00000597400 VPS72Q15906 364 aa16.58■□□□□ 0.24
ZNF548-207ENST00000597400 ABCC11Q96J66 1382 aa16.58■□□□□ 0.24
ZNF548-207ENST00000597400 NRXN1Q9ULB1 1477 aa16.57■□□□□ 0.24
ZNF548-207ENST00000597400 YTHDC2Q9H6S0 1430 aaKnown RBP16.57■□□□□ 0.24
ZNF548-207ENST00000597400 TMEM132EQ6IEE7 984 aa16.57■□□□□ 0.24
ZNF548-207ENST00000597400 THSD7AQ9UPZ6 1657 aa16.56■□□□□ 0.24
ZNF548-207ENST00000597400 ONECUT3O60422 494 aaPredicted RBP16.56■□□□□ 0.24
ZNF548-207ENST00000597400 KRT28Q7Z3Y7 464 aa16.56■□□□□ 0.24
ZNF548-207ENST00000597400 PLEKHG5O94827 1062 aa16.55■□□□□ 0.24
ZNF548-207ENST00000597400 SLC4A1APQ9BWU0 796 aaKnown RBP16.55■□□□□ 0.24
ZNF548-207ENST00000597400 COL14A1Q05707 1796 aaKnown RBP16.55■□□□□ 0.24
ZNF548-207ENST00000597400 KRT27Q7Z3Y8 459 aa16.54■□□□□ 0.24
ZNF548-207ENST00000597400 HRCP23327 699 aa16.53■□□□□ 0.24
ZNF548-207ENST00000597400 SF3B2Q13435 895 aaKnown RBP16.53■□□□□ 0.24
ZNF548-207ENST00000597400 ADGRB2O60241 1585 aa16.52■□□□□ 0.24
ZNF548-207ENST00000597400 SBNO1A3KN83 1393 aa16.51■□□□□ 0.23
ZNF548-207ENST00000597400 ANKRD30BQ9BXX2 1392 aa16.51■□□□□ 0.23
ZNF548-207ENST00000597400 RGL3Q3MIN7 710 aa16.51■□□□□ 0.23
ZNF548-207ENST00000597400 PHF8Q9UPP1 1060 aa16.51■□□□□ 0.23
ZNF548-207ENST00000597400 CCDC9Q9Y3X0 531 aaKnown RBP16.51■□□□□ 0.23
ZNF548-207ENST00000597400 RREB1Q92766 1687 aa16.5■□□□□ 0.23
ZNF548-207ENST00000597400 FAM83GA6ND36 823 aa16.49■□□□□ 0.23
ZNF548-207ENST00000597400 HAP1P54257 671 aaPredicted RBP16.49■□□□□ 0.23
ZNF548-207ENST00000597400 FAM182BQ5T319 152 aa16.49■□□□□ 0.23
ZNF548-207ENST00000597400 FAM98CQ17RN3 349 aaKnown RBP16.48■□□□□ 0.23
ZNF548-207ENST00000597400 ARHGEF10O15013 1369 aa16.48■□□□□ 0.23
ZNF548-207ENST00000597400 NUP188Q5SRE5 1749 aa16.48■□□□□ 0.23
ZNF548-207ENST00000597400 DISP2A7MBM2 1401 aa16.47■□□□□ 0.23
ZNF548-207ENST00000597400 BAG6P46379 1132 aa16.47■□□□□ 0.23
ZNF548-207ENST00000597400 EN1Q05925 392 aaPredicted RBP16.47■□□□□ 0.23
ZNF548-207ENST00000597400 PHRF1Q9P1Y6 1649 aaKnown RBP16.47■□□□□ 0.23
ZNF548-207ENST00000597400 LMOD2Q6P5Q4 547 aa16.46■□□□□ 0.23
ZNF548-207ENST00000597400 DLC1Q96QB1 1528 aa16.45■□□□□ 0.22
ZNF548-207ENST00000597400 A0A0G2JS52 829 aa16.45■□□□□ 0.22
ZNF548-207ENST00000597400 MYT1Q01538 1121 aa16.45■□□□□ 0.22
ZNF548-207ENST00000597400 PSME1Q06323 249 aa16.45■□□□□ 0.22
ZNF548-207ENST00000597400 ANKARQ7Z5J8 1434 aa16.45■□□□□ 0.22
ZNF548-207ENST00000597400 ADGRB1O14514 1584 aa16.44■□□□□ 0.22
ZNF548-207ENST00000597400 SAFB2Q14151 953 aaKnown RBP eCLIP16.44■□□□□ 0.22
ZNF548-207ENST00000597400 R3HDM1Q15032 1099 aaKnown RBP16.44■□□□□ 0.22
ZNF548-207ENST00000597400 PMFBP1Q8TBY8 1022 aa16.44■□□□□ 0.22
ZNF548-207ENST00000597400 BTG4Q9NY30 223 aa16.44■□□□□ 0.22
ZNF548-207ENST00000597400 SIRT1Q96EB6 747 aa16.43■□□□□ 0.22
ZNF548-207ENST00000597400 PRAM1Q96QH2 718 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms