RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 NHSL1Q5SYE7 1610 aa25.16■■□□□ 1.62
CCDC9-202ENST00000595659 PIK3C2GO75747 1445 aa25.15■■□□□ 1.62
CCDC9-202ENST00000595659 C8orf37Q96NL8 207 aa25.15■■□□□ 1.62
CCDC9-202ENST00000595659 AFF2P51816 1311 aa25.14■■□□□ 1.62
CCDC9-202ENST00000595659 ADAMTS2O95450 1211 aa25.14■■□□□ 1.62
CCDC9-202ENST00000595659 CFAP70Q5T0N1 1121 aa25.14■■□□□ 1.62
CCDC9-202ENST00000595659 SOS2Q07890 1332 aaPredicted RBP25.13■■□□□ 1.61
CCDC9-202ENST00000595659 C14orf93Q9H972 538 aaKnown RBP25.13■■□□□ 1.61
CCDC9-202ENST00000595659 ABCC11Q96J66 1382 aa25.13■■□□□ 1.61
CCDC9-202ENST00000595659 XPCQ01831 940 aaPredicted RBP25.11■■□□□ 1.61
CCDC9-202ENST00000595659 TECPR2O15040 1411 aa25.11■■□□□ 1.61
CCDC9-202ENST00000595659 RXRBP28702 533 aa25.1■■□□□ 1.61
CCDC9-202ENST00000595659 YTHDC2Q9H6S0 1430 aaKnown RBP25.1■■□□□ 1.61
CCDC9-202ENST00000595659 FOXO3O43524 673 aa25.09■■□□□ 1.61
CCDC9-202ENST00000595659 IFT172Q9UG01 1749 aa25.08■■□□□ 1.61
CCDC9-202ENST00000595659 NGLY1Q96IV0 654 aa25.07■■□□□ 1.6
CCDC9-202ENST00000595659 SAFB2Q14151 953 aaKnown RBP eCLIP25.06■■□□□ 1.6
CCDC9-202ENST00000595659 KDM2AQ9Y2K7 1162 aa25.06■■□□□ 1.6
CCDC9-202ENST00000595659 NPHP3Q7Z494 1330 aa25.06■■□□□ 1.6
CCDC9-202ENST00000595659 QTRT2Q9H974 415 aaKnown RBP25.05■■□□□ 1.6
CCDC9-202ENST00000595659 CDC42BPGQ6DT37 1551 aa25.05■■□□□ 1.6
CCDC9-202ENST00000595659 DHX57Q6P158 1386 aaKnown RBP25.05■■□□□ 1.6
CCDC9-202ENST00000595659 PRAM1Q96QH2 718 aa25.03■■□□□ 1.6
CCDC9-202ENST00000595659 NRXN1Q9ULB1 1477 aa25.02■■□□□ 1.6
CCDC9-202ENST00000595659 SIRT1Q96EB6 747 aa25.02■■□□□ 1.6
CCDC9-202ENST00000595659 MYOM2P54296 1465 aa25.02■■□□□ 1.6
CCDC9-202ENST00000595659 DCAF11Q8TEB1 546 aa25■■□□□ 1.59
CCDC9-202ENST00000595659 LAMC1P11047 1609 aa25■■□□□ 1.59
CCDC9-202ENST00000595659 PXDNQ92626 1479 aa24.98■■□□□ 1.59
CCDC9-202ENST00000595659 POGKQ9P215 609 aa24.98■■□□□ 1.59
CCDC9-202ENST00000595659 HRCP23327 699 aa24.97■■□□□ 1.59
CCDC9-202ENST00000595659 USP21Q9UK80 565 aa24.97■■□□□ 1.59
CCDC9-202ENST00000595659 TRAK1Q9UPV9 953 aa24.97■■□□□ 1.59
CCDC9-202ENST00000595659 RBM6P78332 1123 aaKnown RBP24.96■■□□□ 1.59
CCDC9-202ENST00000595659 UPF1Q92900 1129 aaKnown RBP eCLIP24.96■■□□□ 1.59
CCDC9-202ENST00000595659 KNDC1Q76NI1 1749 aa24.95■■□□□ 1.58
CCDC9-202ENST00000595659 KRT28Q7Z3Y7 464 aa24.94■■□□□ 1.58
CCDC9-202ENST00000595659 PLEKHG5O94827 1062 aa24.93■■□□□ 1.58
CCDC9-202ENST00000595659 HIRIP3Q9BW71 556 aaPredicted RBP24.93■■□□□ 1.58
CCDC9-202ENST00000595659 PHF8Q9UPP1 1060 aa24.93■■□□□ 1.58
CCDC9-202ENST00000595659 FNBP4Q8N3X1 1017 aaPredicted RBP24.92■■□□□ 1.58
CCDC9-202ENST00000595659 CDK12Q9NYV4 1490 aaPredicted RBP24.89■■□□□ 1.58
CCDC9-202ENST00000595659 SPATA31A3Q5VYP0 1347 aa24.89■■□□□ 1.58
CCDC9-202ENST00000595659 RGS12O14924 1447 aa24.89■■□□□ 1.58
CCDC9-202ENST00000595659 MINK1Q8N4C8 1332 aaPredicted RBP24.88■■□□□ 1.57
CCDC9-202ENST00000595659 PMFBP1Q8TBY8 1022 aa24.88■■□□□ 1.57
CCDC9-202ENST00000595659 TRPC5Q9UL62 973 aaPredicted RBP24.88■■□□□ 1.57
CCDC9-202ENST00000595659 FMN2Q9NZ56 1722 aa24.88■■□□□ 1.57
CCDC9-202ENST00000595659 ADGRB1O14514 1584 aa24.87■■□□□ 1.57
CCDC9-202ENST00000595659 LMOD2Q6P5Q4 547 aa24.86■■□□□ 1.57
CCDC9-202ENST00000595659 COL22A1Q8NFW1 1626 aaPredicted RBP24.86■■□□□ 1.57
CCDC9-202ENST00000595659 PSME1Q06323 249 aa24.85■■□□□ 1.57
CCDC9-202ENST00000595659 CABLES1Q8TDN4 633 aa24.84■■□□□ 1.57
CCDC9-202ENST00000595659 DLC1Q96QB1 1528 aa24.84■■□□□ 1.57
CCDC9-202ENST00000595659 HAP1P54257 671 aaPredicted RBP24.82■■□□□ 1.56
CCDC9-202ENST00000595659 STAC3Q96MF2 364 aa24.82■■□□□ 1.56
CCDC9-202ENST00000595659 ATRNO75882 1429 aa24.81■■□□□ 1.56
CCDC9-202ENST00000595659 BCL9LQ86UU0 1499 aa24.81■■□□□ 1.56
CCDC9-202ENST00000595659 PRR36Q9H6K5 1346 aa24.8■■□□□ 1.56
CCDC9-202ENST00000595659 TNS3Q68CZ2 1445 aa24.79■■□□□ 1.56
CCDC9-202ENST00000595659 KIF1AQ12756 1690 aa24.79■■□□□ 1.56
CCDC9-202ENST00000595659 WASLO00401 505 aaPredicted RBP24.79■■□□□ 1.56
CCDC9-202ENST00000595659 ANKARQ7Z5J8 1434 aa24.77■■□□□ 1.56
CCDC9-202ENST00000595659 GJD4Q96KN9 370 aaPredicted RBP24.76■■□□□ 1.55
CCDC9-202ENST00000595659 SBNO1A3KN83 1393 aa24.76■■□□□ 1.55
CCDC9-202ENST00000595659 UNC5CLQ8IV45 518 aa24.75■■□□□ 1.55
CCDC9-202ENST00000595659 RGPD8O14715 1765 aaPredicted RBP24.75■■□□□ 1.55
CCDC9-202ENST00000595659 USP32Q8NFA0 1604 aa24.73■■□□□ 1.55
CCDC9-202ENST00000595659 NBPF1Q3BBV0 1214 aa24.73■■□□□ 1.55
CCDC9-202ENST00000595659 NGDNQ8NEJ9 315 aaKnown RBP24.72■■□□□ 1.55
CCDC9-202ENST00000595659 ADGRB2O60241 1585 aa24.71■■□□□ 1.55
CCDC9-202ENST00000595659 ARHGEF10O15013 1369 aa24.7■■□□□ 1.55
CCDC9-202ENST00000595659 GPRASP1Q5JY77 1395 aa24.7■■□□□ 1.55
CCDC9-202ENST00000595659 SLIT2O94813 1529 aa24.7■■□□□ 1.54
CCDC9-202ENST00000595659 EIF3AQ14152 1382 aaKnown RBP24.69■■□□□ 1.54
CCDC9-202ENST00000595659 ATAD2Q6PL18 1390 aa24.69■■□□□ 1.54
CCDC9-202ENST00000595659 PAK3O75914 559 aaPredicted RBP24.69■■□□□ 1.54
CCDC9-202ENST00000595659 NUDT16Q96DE0 195 aaKnown RBP24.69■■□□□ 1.54
CCDC9-202ENST00000595659 TULP4Q9NRJ4 1543 aa24.68■■□□□ 1.54
CCDC9-202ENST00000595659 CDK19Q9BWU1 502 aa24.68■■□□□ 1.54
CCDC9-202ENST00000595659 FAM83GA6ND36 823 aa24.67■■□□□ 1.54
CCDC9-202ENST00000595659 CCDC9Q9Y3X0 531 aaKnown RBP24.67■■□□□ 1.54
CCDC9-202ENST00000595659 RALGAPBQ86X10 1494 aa24.65■■□□□ 1.54
CCDC9-202ENST00000595659 SIN3AQ96ST3 1273 aa24.65■■□□□ 1.54
CCDC9-202ENST00000595659 MARF1Q9Y4F3 1742 aaKnown RBP24.64■■□□□ 1.53
CCDC9-202ENST00000595659 VPS72Q15906 364 aa24.62■■□□□ 1.53
CCDC9-202ENST00000595659 L3MBTL2Q969R5 705 aa24.62■■□□□ 1.53
CCDC9-202ENST00000595659 NEUROD1Q13562 356 aa24.61■■□□□ 1.53
CCDC9-202ENST00000595659 ARHGEF28Q8N1W1 1705 aaKnown RBP24.6■■□□□ 1.53
CCDC9-202ENST00000595659 GLI3P10071 1580 aa24.59■■□□□ 1.53
CCDC9-202ENST00000595659 ATP7BP35670 1465 aa24.59■■□□□ 1.53
CCDC9-202ENST00000595659 NUTM2GQ5VZR2 741 aa24.59■■□□□ 1.53
CCDC9-202ENST00000595659 SEPT12Q8IYM1 358 aa24.59■■□□□ 1.53
CCDC9-202ENST00000595659 BTG4Q9NY30 223 aa24.59■■□□□ 1.53
CCDC9-202ENST00000595659 CCDC61Q9Y6R9 512 aa24.57■■□□□ 1.52
CCDC9-202ENST00000595659 TRPM3Q9HCF6 1732 aaPredicted RBP24.57■■□□□ 1.52
CCDC9-202ENST00000595659 ACEP12821 1306 aa24.57■■□□□ 1.52
CCDC9-202ENST00000595659 SRPK2P78362 688 aaKnown RBP24.55■■□□□ 1.52
CCDC9-202ENST00000595659 NBPF8Q3BBV2 869 aa24.55■■□□□ 1.52
CCDC9-202ENST00000595659 CABP2Q9NPB3 220 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms