RNA–Protein interactions for RNA: ENST00000594552.5

CAPN12-204, Transcript of calpain 12, humanhuman

TSL 2

Gene CAPN12, Length 1,046 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-204ENST00000594552 C1orf167Q5SNV9 1468 aa19.2■□□□□ 0.66
CAPN12-204ENST00000594552 ZNF772Q68DY9 489 aaPredicted RBP19.19■□□□□ 0.66
CAPN12-204ENST00000594552 SPATA31E1Q6ZUB1 1445 aa19.18■□□□□ 0.66
CAPN12-204ENST00000594552 LRRC59Q96AG4 307 aaKnown RBP19.18■□□□□ 0.66
CAPN12-204ENST00000594552 ADGRF5Q8IZF2 1346 aa19.18■□□□□ 0.66
CAPN12-204ENST00000594552 CDC42BPGQ6DT37 1551 aa19.16■□□□□ 0.66
CAPN12-204ENST00000594552 STK26Q9P289 416 aa19.16■□□□□ 0.66
CAPN12-204ENST00000594552 HRCP23327 699 aa19.14■□□□□ 0.65
CAPN12-204ENST00000594552 DDX17Q92841 729 aaKnown RBP19.14■□□□□ 0.65
CAPN12-204ENST00000594552 PIK3C2GO75747 1445 aa19.14■□□□□ 0.65
CAPN12-204ENST00000594552 KNDC1Q76NI1 1749 aa19.14■□□□□ 0.65
CAPN12-204ENST00000594552 LAMC1P11047 1609 aa19.13■□□□□ 0.65
CAPN12-204ENST00000594552 LRPPRCP42704 1394 aaKnown RBP19.12■□□□□ 0.65
CAPN12-204ENST00000594552 PNPLA6Q8IY17 1366 aa19.12■□□□□ 0.65
CAPN12-204ENST00000594552 TECPR2O15040 1411 aa19.1■□□□□ 0.65
CAPN12-204ENST00000594552 ORAI2Q96SN7 254 aa19.1■□□□□ 0.65
CAPN12-204ENST00000594552 MYOM2P54296 1465 aa19.09■□□□□ 0.65
CAPN12-204ENST00000594552 AFF2P51816 1311 aa19.09■□□□□ 0.65
CAPN12-204ENST00000594552 ESCO1Q5FWF5 840 aa19.09■□□□□ 0.65
CAPN12-204ENST00000594552 C8orf37Q96NL8 207 aa19.09■□□□□ 0.65
CAPN12-204ENST00000594552 NPHP3Q7Z494 1330 aa19.08■□□□□ 0.65
CAPN12-204ENST00000594552 TMEM132EQ6IEE7 984 aa19.08■□□□□ 0.64
CAPN12-204ENST00000594552 YTHDC2Q9H6S0 1430 aaKnown RBP19.08■□□□□ 0.64
CAPN12-204ENST00000594552 ABCC11Q96J66 1382 aa19.07■□□□□ 0.64
CAPN12-204ENST00000594552 RXRBP28702 533 aa19.06■□□□□ 0.64
CAPN12-204ENST00000594552 WAPLQ7Z5K2 1190 aa19.06■□□□□ 0.64
CAPN12-204ENST00000594552 DHX57Q6P158 1386 aaKnown RBP19.06■□□□□ 0.64
CAPN12-204ENST00000594552 NUTM2FA1L443 756 aa19.05■□□□□ 0.64
CAPN12-204ENST00000594552 ADAMTS2O95450 1211 aa19.05■□□□□ 0.64
CAPN12-204ENST00000594552 SOS2Q07890 1332 aaPredicted RBP19.04■□□□□ 0.64
CAPN12-204ENST00000594552 KIF1AQ12756 1690 aa19.03■□□□□ 0.64
CAPN12-204ENST00000594552 NRXN1Q9ULB1 1477 aa19.03■□□□□ 0.64
CAPN12-204ENST00000594552 FMN2Q9NZ56 1722 aa19.03■□□□□ 0.64
CAPN12-204ENST00000594552 NGLY1Q96IV0 654 aa19.02■□□□□ 0.64
CAPN12-204ENST00000594552 PLEKHH1Q9ULM0 1364 aa19.02■□□□□ 0.64
CAPN12-204ENST00000594552 C14orf93Q9H972 538 aaKnown RBP19.01■□□□□ 0.63
CAPN12-204ENST00000594552 COL22A1Q8NFW1 1626 aaPredicted RBP19■□□□□ 0.63
CAPN12-204ENST00000594552 CFAP70Q5T0N1 1121 aa19■□□□□ 0.63
CAPN12-204ENST00000594552 CDK12Q9NYV4 1490 aaPredicted RBP19■□□□□ 0.63
CAPN12-204ENST00000594552 FOXO3O43524 673 aa18.99■□□□□ 0.63
CAPN12-204ENST00000594552 XPCQ01831 940 aaPredicted RBP18.99■□□□□ 0.63
CAPN12-204ENST00000594552 PXDNQ92626 1479 aa18.98■□□□□ 0.63
CAPN12-204ENST00000594552 TRIM26Q12899 539 aaPredicted RBP18.98■□□□□ 0.63
CAPN12-204ENST00000594552 SAFB2Q14151 953 aaKnown RBP eCLIP18.98■□□□□ 0.63
CAPN12-204ENST00000594552 POGKQ9P215 609 aa18.98■□□□□ 0.63
CAPN12-204ENST00000594552 RBM6P78332 1123 aaKnown RBP18.96■□□□□ 0.63
CAPN12-204ENST00000594552 PRAM1Q96QH2 718 aa18.96■□□□□ 0.63
CAPN12-204ENST00000594552 QTRT2Q9H974 415 aaKnown RBP18.96■□□□□ 0.63
CAPN12-204ENST00000594552 DLC1Q96QB1 1528 aa18.95■□□□□ 0.62
CAPN12-204ENST00000594552 SIRT1Q96EB6 747 aa18.95■□□□□ 0.62
CAPN12-204ENST00000594552 USP21Q9UK80 565 aa18.95■□□□□ 0.62
CAPN12-204ENST00000594552 KDM2AQ9Y2K7 1162 aa18.95■□□□□ 0.62
CAPN12-204ENST00000594552 HAP1P54257 671 aaPredicted RBP18.94■□□□□ 0.62
CAPN12-204ENST00000594552 DCAF11Q8TEB1 546 aa18.94■□□□□ 0.62
CAPN12-204ENST00000594552 RGS12O14924 1447 aa18.93■□□□□ 0.62
CAPN12-204ENST00000594552 TRPC5Q9UL62 973 aaPredicted RBP18.92■□□□□ 0.62
CAPN12-204ENST00000594552 EIF3AQ14152 1382 aaKnown RBP18.92■□□□□ 0.62
CAPN12-204ENST00000594552 MARF1Q9Y4F3 1742 aaKnown RBP18.91■□□□□ 0.62
CAPN12-204ENST00000594552 ADGRB2O60241 1585 aa18.91■□□□□ 0.62
CAPN12-204ENST00000594552 STAC3Q96MF2 364 aa18.91■□□□□ 0.62
CAPN12-204ENST00000594552 PHF8Q9UPP1 1060 aa18.91■□□□□ 0.62
CAPN12-204ENST00000594552 TRAK1Q9UPV9 953 aa18.91■□□□□ 0.62
CAPN12-204ENST00000594552 RGPD8O14715 1765 aaPredicted RBP18.91■□□□□ 0.62
CAPN12-204ENST00000594552 ADGRB1O14514 1584 aa18.9■□□□□ 0.62
CAPN12-204ENST00000594552 PSME1Q06323 249 aa18.9■□□□□ 0.62
CAPN12-204ENST00000594552 KRT28Q7Z3Y7 464 aa18.9■□□□□ 0.62
CAPN12-204ENST00000594552 ANKARQ7Z5J8 1434 aa18.9■□□□□ 0.62
CAPN12-204ENST00000594552 UPF1Q92900 1129 aaKnown RBP eCLIP18.89■□□□□ 0.61
CAPN12-204ENST00000594552 TNS3Q68CZ2 1445 aa18.89■□□□□ 0.61
CAPN12-204ENST00000594552 LMOD2Q6P5Q4 547 aa18.88■□□□□ 0.61
CAPN12-204ENST00000594552 SPATA31A3Q5VYP0 1347 aa18.88■□□□□ 0.61
CAPN12-204ENST00000594552 MINK1Q8N4C8 1332 aaPredicted RBP18.87■□□□□ 0.61
CAPN12-204ENST00000594552 USP32Q8NFA0 1604 aa18.86■□□□□ 0.61
CAPN12-204ENST00000594552 PLEKHG5O94827 1062 aa18.86■□□□□ 0.61
CAPN12-204ENST00000594552 FNBP4Q8N3X1 1017 aaPredicted RBP18.86■□□□□ 0.61
CAPN12-204ENST00000594552 HIRIP3Q9BW71 556 aaPredicted RBP18.86■□□□□ 0.61
CAPN12-204ENST00000594552 ATRNO75882 1429 aa18.85■□□□□ 0.61
CAPN12-204ENST00000594552 ARHGEF10O15013 1369 aa18.85■□□□□ 0.61
CAPN12-204ENST00000594552 TULP4Q9NRJ4 1543 aa18.84■□□□□ 0.61
CAPN12-204ENST00000594552 ATAD2Q6PL18 1390 aa18.84■□□□□ 0.61
CAPN12-204ENST00000594552 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.83■□□□□ 0.61
CAPN12-204ENST00000594552 SBNO1A3KN83 1393 aa18.83■□□□□ 0.61
CAPN12-204ENST00000594552 GPRASP1Q5JY77 1395 aa18.83■□□□□ 0.61
CAPN12-204ENST00000594552 PMFBP1Q8TBY8 1022 aa18.83■□□□□ 0.6
CAPN12-204ENST00000594552 ARHGEF28Q8N1W1 1705 aaKnown RBP18.83■□□□□ 0.6
CAPN12-204ENST00000594552 ITSN1Q15811 1721 aa18.8■□□□□ 0.6
CAPN12-204ENST00000594552 ABCA3Q99758 1704 aa18.8■□□□□ 0.6
CAPN12-204ENST00000594552 BCL9LQ86UU0 1499 aa18.79■□□□□ 0.6
CAPN12-204ENST00000594552 KIAA1210Q9ULL0 1709 aa18.78■□□□□ 0.6
CAPN12-204ENST00000594552 WASLO00401 505 aaPredicted RBP18.78■□□□□ 0.6
CAPN12-204ENST00000594552 PLCH1Q4KWH8 1693 aa18.77■□□□□ 0.6
CAPN12-204ENST00000594552 UNC5CLQ8IV45 518 aa18.77■□□□□ 0.6
CAPN12-204ENST00000594552 NGDNQ8NEJ9 315 aaKnown RBP18.77■□□□□ 0.6
CAPN12-204ENST00000594552 GJD4Q96KN9 370 aaPredicted RBP18.77■□□□□ 0.6
CAPN12-204ENST00000594552 CCDC9Q9Y3X0 531 aaKnown RBP18.77■□□□□ 0.6
CAPN12-204ENST00000594552 SLIT2O94813 1529 aa18.77■□□□□ 0.6
CAPN12-204ENST00000594552 CABLES1Q8TDN4 633 aa18.76■□□□□ 0.59
CAPN12-204ENST00000594552 TRPM3Q9HCF6 1732 aaPredicted RBP18.75■□□□□ 0.59
CAPN12-204ENST00000594552 PAK3O75914 559 aaPredicted RBP18.75■□□□□ 0.59
CAPN12-204ENST00000594552 NWD2Q9ULI1 1742 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms