RNA–Protein interactions for RNA: ENST00000593209.5

GHDC-212, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-212ENST00000593209 ADAMTS13Q76LX8 1427 aa25.64■■□□□ 1.7
GHDC-212ENST00000593209 PNISRQ8TF01 805 aaKnown RBP25.64■■□□□ 1.7
GHDC-212ENST00000593209 LRPPRCP42704 1394 aaKnown RBP25.63■■□□□ 1.69
GHDC-212ENST00000593209 SLC24A1O60721 1099 aa25.63■■□□□ 1.69
GHDC-212ENST00000593209 CC2D1BQ5T0F9 858 aaKnown RBP25.62■■□□□ 1.69
GHDC-212ENST00000593209 AMER1Q5JTC6 1135 aaPredicted RBP25.6■■□□□ 1.69
GHDC-212ENST00000593209 METP08581 1390 aa25.6■■□□□ 1.69
GHDC-212ENST00000593209 ZNF335Q9H4Z2 1342 aaPredicted RBP25.59■■□□□ 1.69
GHDC-212ENST00000593209 NLRP13Q86W25 1043 aa25.59■■□□□ 1.69
GHDC-212ENST00000593209 TMC1Q8TDI8 760 aa25.59■■□□□ 1.69
GHDC-212ENST00000593209 ZBED9Q6R2W3 1325 aa25.59■■□□□ 1.69
GHDC-212ENST00000593209 YTHDC2Q9H6S0 1430 aaKnown RBP25.58■■□□□ 1.69
GHDC-212ENST00000593209 NPC1L1Q9UHC9 1359 aa25.56■■□□□ 1.68
GHDC-212ENST00000593209 STK26Q9P289 416 aa25.56■■□□□ 1.68
GHDC-212ENST00000593209 STRCP1A6NGW2 1772 aa25.54■■□□□ 1.68
GHDC-212ENST00000593209 KNSTRNQ9Y448 316 aa25.54■■□□□ 1.68
GHDC-212ENST00000593209 TBX22Q9Y458 520 aa25.53■■□□□ 1.68
GHDC-212ENST00000593209 USP32Q8NFA0 1604 aa25.53■■□□□ 1.68
GHDC-212ENST00000593209 DIP2AQ14689 1571 aa25.52■■□□□ 1.68
GHDC-212ENST00000593209 CARD14Q9BXL6 1004 aa25.52■■□□□ 1.68
GHDC-212ENST00000593209 SUPT16HQ9Y5B9 1047 aaKnown RBP25.51■■□□□ 1.67
GHDC-212ENST00000593209 DLC1Q96QB1 1528 aa25.51■■□□□ 1.67
GHDC-212ENST00000593209 KNDC1Q76NI1 1749 aa25.49■■□□□ 1.67
GHDC-212ENST00000593209 PTPRUQ92729 1446 aa25.48■■□□□ 1.67
GHDC-212ENST00000593209 ABCC11Q96J66 1382 aa25.48■■□□□ 1.67
GHDC-212ENST00000593209 LTBP4Q8N2S1 1624 aa25.47■■□□□ 1.67
GHDC-212ENST00000593209 CHD2O14647 1828 aaKnown RBP25.47■■□□□ 1.67
GHDC-212ENST00000593209 PUS7Q96PZ0 661 aaKnown RBP25.46■■□□□ 1.67
GHDC-212ENST00000593209 EVC2Q86UK5 1308 aa25.45■■□□□ 1.66
GHDC-212ENST00000593209 PPP2R1AP30153 589 aa25.45■■□□□ 1.66
GHDC-212ENST00000593209 TECPR2O15040 1411 aa25.43■■□□□ 1.66
GHDC-212ENST00000593209 NSD3Q9BZ95 1437 aa25.43■■□□□ 1.66
GHDC-212ENST00000593209 SLC12A5Q9H2X9 1139 aa25.43■■□□□ 1.66
GHDC-212ENST00000593209 BLMP54132 1417 aaPredicted RBP25.43■■□□□ 1.66
GHDC-212ENST00000593209 SAFB2Q14151 953 aaKnown RBP eCLIP25.42■■□□□ 1.66
GHDC-212ENST00000593209 RBM33Q96EV2 1170 aaKnown RBP25.42■■□□□ 1.66
GHDC-212ENST00000593209 PRAM1Q96QH2 718 aa25.42■■□□□ 1.66
GHDC-212ENST00000593209 KCNA6P17658 529 aa25.42■■□□□ 1.66
GHDC-212ENST00000593209 WAPLQ7Z5K2 1190 aa25.41■■□□□ 1.66
GHDC-212ENST00000593209 AMOTL2Q9Y2J4 779 aa25.41■■□□□ 1.66
GHDC-212ENST00000593209 CPS1P31327 1500 aa25.41■■□□□ 1.66
GHDC-212ENST00000593209 INSRP06213 1382 aa25.41■■□□□ 1.66
GHDC-212ENST00000593209 NWD1Q149M9 1564 aa25.4■■□□□ 1.66
GHDC-212ENST00000593209 PIK3R4Q99570 1358 aa25.4■■□□□ 1.66
GHDC-212ENST00000593209 PLEKHH1Q9ULM0 1364 aa25.4■■□□□ 1.66
GHDC-212ENST00000593209 XRN1Q8IZH2 1706 aaKnown RBP25.4■■□□□ 1.66
GHDC-212ENST00000593209 POGKQ9P215 609 aa25.39■■□□□ 1.65
GHDC-212ENST00000593209 ROBO2Q9HCK4 1378 aa25.39■■□□□ 1.65
GHDC-212ENST00000593209 CABP2Q9NPB3 220 aa25.38■■□□□ 1.65
GHDC-212ENST00000593209 SIRT1Q96EB6 747 aa25.37■■□□□ 1.65
GHDC-212ENST00000593209 ANKRD36BQ8N2N9 1353 aa25.37■■□□□ 1.65
GHDC-212ENST00000593209 FAM135BQ49AJ0 1406 aa25.37■■□□□ 1.65
GHDC-212ENST00000593209 MINK1Q8N4C8 1332 aaPredicted RBP25.36■■□□□ 1.65
GHDC-212ENST00000593209 SENP3-EIF4A1A0A087X0R7 540 aa25.36■■□□□ 1.65
GHDC-212ENST00000593209 SMG6Q86US8 1419 aaKnown RBP25.36■■□□□ 1.65
GHDC-212ENST00000593209 FKBP8Q14318 412 aa25.35■■□□□ 1.65
GHDC-212ENST00000593209 CD163L1Q9NR16 1453 aa25.35■■□□□ 1.65
GHDC-212ENST00000593209 LRRC7Q96NW7 1537 aa25.34■■□□□ 1.65
GHDC-212ENST00000593209 PROSER2Q86WR7 435 aaPredicted RBP25.34■■□□□ 1.65
GHDC-212ENST00000593209 ANKRD26Q9UPS8 1709 aa25.34■■□□□ 1.65
GHDC-212ENST00000593209 XIRP1Q702N8 1843 aaKnown RBP25.34■■□□□ 1.65
GHDC-212ENST00000593209 CERKQ8TCT0 537 aa25.33■■□□□ 1.64
GHDC-212ENST00000593209 NINLQ9Y2I6 1382 aa25.32■■□□□ 1.64
GHDC-212ENST00000593209 SHPRHQ149N8 1683 aa25.32■■□□□ 1.64
GHDC-212ENST00000593209 PTCH1Q13635 1447 aa25.32■■□□□ 1.64
GHDC-212ENST00000593209 NKTRP30414 1462 aaKnown RBP25.32■■□□□ 1.64
GHDC-212ENST00000593209 A0A1W2PP64 1363 aa25.3■■□□□ 1.64
GHDC-212ENST00000593209 ATAD2Q6PL18 1390 aa25.3■■□□□ 1.64
GHDC-212ENST00000593209 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.3■■□□□ 1.64
GHDC-212ENST00000593209 TMEM94Q12767 1356 aa25.3■■□□□ 1.64
GHDC-212ENST00000593209 KIF20BQ96Q89 1820 aa25.28■■□□□ 1.64
GHDC-212ENST00000593209 SRPK2P78362 688 aaKnown RBP25.28■■□□□ 1.64
GHDC-212ENST00000593209 NUDCQ9Y266 331 aa25.26■■□□□ 1.63
GHDC-212ENST00000593209 NEFLP07196 543 aa25.25■■□□□ 1.63
GHDC-212ENST00000593209 CDK19Q9BWU1 502 aa25.25■■□□□ 1.63
GHDC-212ENST00000593209 ADAMTS8Q9UP79 889 aa25.25■■□□□ 1.63
GHDC-212ENST00000593209 C14orf37Q86TY3 774 aa25.23■■□□□ 1.63
GHDC-212ENST00000593209 NSD2O96028 1365 aa25.23■■□□□ 1.63
GHDC-212ENST00000593209 CGNL1Q0VF96 1302 aa25.22■■□□□ 1.63
GHDC-212ENST00000593209 ADGRB2O60241 1585 aa25.22■■□□□ 1.63
GHDC-212ENST00000593209 POLR3AO14802 1390 aaPredicted RBP25.21■■□□□ 1.63
GHDC-212ENST00000593209 NALCNQ8IZF0 1738 aa25.19■■□□□ 1.62
GHDC-212ENST00000593209 ATP7BP35670 1465 aa25.19■■□□□ 1.62
GHDC-212ENST00000593209 WASLO00401 505 aaPredicted RBP25.19■■□□□ 1.62
GHDC-212ENST00000593209 MORC1Q86VD1 984 aa25.19■■□□□ 1.62
GHDC-212ENST00000593209 AKAP12Q02952 1782 aa25.18■■□□□ 1.62
GHDC-212ENST00000593209 MON2Q7Z3U7 1717 aa25.17■■□□□ 1.62
GHDC-212ENST00000593209 WDR43Q15061 677 aaKnown RBP eCLIP25.16■■□□□ 1.62
GHDC-212ENST00000593209 TOPAZ1Q8N9V7 1692 aa25.16■■□□□ 1.62
GHDC-212ENST00000593209 SALL2Q9Y467 1007 aaPredicted RBP25.15■■□□□ 1.62
GHDC-212ENST00000593209 IQSEC2Q5JU85 1478 aa25.15■■□□□ 1.62
GHDC-212ENST00000593209 IRX6P78412 446 aaPredicted RBP25.14■■□□□ 1.62
GHDC-212ENST00000593209 ITSN1Q15811 1721 aa25.14■■□□□ 1.62
GHDC-212ENST00000593209 MSH6P52701 1360 aa25.14■■□□□ 1.61
GHDC-212ENST00000593209 CDC42BPGQ6DT37 1551 aa25.13■■□□□ 1.61
GHDC-212ENST00000593209 TERF2IPQ9NYB0 399 aa25.13■■□□□ 1.61
GHDC-212ENST00000593209 CABP1Q9NZU7 370 aa25.13■■□□□ 1.61
GHDC-212ENST00000593209 UBAP1LF5GYI3 381 aa25.12■■□□□ 1.61
GHDC-212ENST00000593209 RNF123Q5XPI4 1314 aa25.12■■□□□ 1.61
GHDC-212ENST00000593209 ADGRL3Q9HAR2 1447 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms