RNA–Protein interactions for RNA: ENST00000593025.1

RANBP3-230, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 551 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-230ENST00000593025 PRAG1Q86YV5 1406 aa16.75■□□□□ 0.27
RANBP3-230ENST00000593025 NUP155O75694 1391 aa16.73■□□□□ 0.27
RANBP3-230ENST00000593025 ROCK1Q13464 1354 aa16.73■□□□□ 0.27
RANBP3-230ENST00000593025 BLMP54132 1417 aaPredicted RBP16.72■□□□□ 0.27
RANBP3-230ENST00000593025 FOXD1Q16676 465 aa16.71■□□□□ 0.27
RANBP3-230ENST00000593025 RALGAPBQ86X10 1494 aa16.71■□□□□ 0.27
RANBP3-230ENST00000593025 DEFB132Q7Z7B7 95 aa16.7■□□□□ 0.26
RANBP3-230ENST00000593025 GJD4Q96KN9 370 aaPredicted RBP16.7■□□□□ 0.26
RANBP3-230ENST00000593025 CDC42BPGQ6DT37 1551 aa16.69■□□□□ 0.26
RANBP3-230ENST00000593025 APLP2Q06481 763 aa16.69■□□□□ 0.26
RANBP3-230ENST00000593025 SLIT2O94813 1529 aa16.69■□□□□ 0.26
RANBP3-230ENST00000593025 ZNF326Q5BKZ1 582 aaKnown RBP16.67■□□□□ 0.26
RANBP3-230ENST00000593025 KIF1BO60333 1816 aa16.65■□□□□ 0.26
RANBP3-230ENST00000593025 USP32Q8NFA0 1604 aa16.64■□□□□ 0.25
RANBP3-230ENST00000593025 HFM1A2PYH4 1435 aa16.63■□□□□ 0.25
RANBP3-230ENST00000593025 XPCQ01831 940 aaPredicted RBP16.63■□□□□ 0.25
RANBP3-230ENST00000593025 NPHP3Q7Z494 1330 aa16.63■□□□□ 0.25
RANBP3-230ENST00000593025 PLCH1Q4KWH8 1693 aa16.62■□□□□ 0.25
RANBP3-230ENST00000593025 UNC5CLQ8IV45 518 aa16.61■□□□□ 0.25
RANBP3-230ENST00000593025 PPLO60437 1756 aa16.61■□□□□ 0.25
RANBP3-230ENST00000593025 ABCA3Q99758 1704 aa16.59■□□□□ 0.25
RANBP3-230ENST00000593025 FOXO3O43524 673 aa16.59■□□□□ 0.25
RANBP3-230ENST00000593025 ESCO1Q5FWF5 840 aa16.59■□□□□ 0.25
RANBP3-230ENST00000593025 PSDA5PKW4 1024 aaPredicted RBP16.58■□□□□ 0.24
RANBP3-230ENST00000593025 HRCP23327 699 aa16.58■□□□□ 0.24
RANBP3-230ENST00000593025 NWD2Q9ULI1 1742 aa16.58■□□□□ 0.24
RANBP3-230ENST00000593025 FMN2Q9NZ56 1722 aa16.57■□□□□ 0.24
RANBP3-230ENST00000593025 NAIPQ13075 1403 aa16.57■□□□□ 0.24
RANBP3-230ENST00000593025 SEPT12Q8IYM1 358 aa16.57■□□□□ 0.24
RANBP3-230ENST00000593025 SPATA31A3Q5VYP0 1347 aa16.56■□□□□ 0.24
RANBP3-230ENST00000593025 ONECUT3O60422 494 aaPredicted RBP16.56■□□□□ 0.24
RANBP3-230ENST00000593025 KIF1AQ12756 1690 aa16.55■□□□□ 0.24
RANBP3-230ENST00000593025 TECPR2O15040 1411 aa16.54■□□□□ 0.24
RANBP3-230ENST00000593025 NRAPQ86VF7 1730 aa16.54■□□□□ 0.24
RANBP3-230ENST00000593025 VPS72Q15906 364 aa16.53■□□□□ 0.24
RANBP3-230ENST00000593025 VGFO15240 615 aaPredicted RBP16.52■□□□□ 0.24
RANBP3-230ENST00000593025 KNDC1Q76NI1 1749 aa16.52■□□□□ 0.24
RANBP3-230ENST00000593025 TNS1Q9HBL0 1735 aaKnown RBP16.52■□□□□ 0.24
RANBP3-230ENST00000593025 PLEKHH1Q9ULM0 1364 aa16.51■□□□□ 0.23
RANBP3-230ENST00000593025 RGPD8O14715 1765 aaPredicted RBP16.51■□□□□ 0.23
RANBP3-230ENST00000593025 NUTM2FA1L443 756 aa16.51■□□□□ 0.23
RANBP3-230ENST00000593025 SF3B2Q13435 895 aaKnown RBP16.51■□□□□ 0.23
RANBP3-230ENST00000593025 CCDC144AA2RUR9 1427 aa16.51■□□□□ 0.23
RANBP3-230ENST00000593025 LRPPRCP42704 1394 aaKnown RBP16.51■□□□□ 0.23
RANBP3-230ENST00000593025 RGPD1P0DJD0 1748 aa16.5■□□□□ 0.23
RANBP3-230ENST00000593025 KRT27Q7Z3Y8 459 aa16.5■□□□□ 0.23
RANBP3-230ENST00000593025 ITGAEP38570 1179 aa16.49■□□□□ 0.23
RANBP3-230ENST00000593025 TNS3Q68CZ2 1445 aa16.49■□□□□ 0.23
RANBP3-230ENST00000593025 WAPLQ7Z5K2 1190 aa16.49■□□□□ 0.23
RANBP3-230ENST00000593025 IFT172Q9UG01 1749 aa16.49■□□□□ 0.23
RANBP3-230ENST00000593025 CABLES1Q8TDN4 633 aa16.48■□□□□ 0.23
RANBP3-230ENST00000593025 RPGRIP1LQ68CZ1 1315 aa16.47■□□□□ 0.23
RANBP3-230ENST00000593025 DISP2A7MBM2 1401 aa16.46■□□□□ 0.23
RANBP3-230ENST00000593025 THSD7AQ9UPZ6 1657 aa16.46■□□□□ 0.23
RANBP3-230ENST00000593025 ADGRF5Q8IZF2 1346 aa16.45■□□□□ 0.22
RANBP3-230ENST00000593025 BAG6P46379 1132 aa16.45■□□□□ 0.22
RANBP3-230ENST00000593025 EN1Q05925 392 aaPredicted RBP16.45■□□□□ 0.22
RANBP3-230ENST00000593025 KRT28Q7Z3Y7 464 aa16.45■□□□□ 0.22
RANBP3-230ENST00000593025 R3HDM1Q15032 1099 aaKnown RBP16.44■□□□□ 0.22
RANBP3-230ENST00000593025 NRXN1Q9ULB1 1477 aa16.43■□□□□ 0.22
RANBP3-230ENST00000593025 ABCC11Q96J66 1382 aa16.43■□□□□ 0.22
RANBP3-230ENST00000593025 TRPM3Q9HCF6 1732 aaPredicted RBP16.43■□□□□ 0.22
RANBP3-230ENST00000593025 FAM83GA6ND36 823 aa16.43■□□□□ 0.22
RANBP3-230ENST00000593025 RRBP1Q9P2E9 1410 aaKnown RBP16.43■□□□□ 0.22
RANBP3-230ENST00000593025 STK26Q9P289 416 aa16.42■□□□□ 0.22
RANBP3-230ENST00000593025 CRYBG1Q9Y4K1 1723 aa16.42■□□□□ 0.22
RANBP3-230ENST00000593025 SBNO1A3KN83 1393 aa16.41■□□□□ 0.22
RANBP3-230ENST00000593025 FAM98CQ17RN3 349 aaKnown RBP16.41■□□□□ 0.22
RANBP3-230ENST00000593025 FAM182BQ5T319 152 aa16.41■□□□□ 0.22
RANBP3-230ENST00000593025 CCDC9Q9Y3X0 531 aaKnown RBP16.41■□□□□ 0.22
RANBP3-230ENST00000593025 COL14A1Q05707 1796 aaKnown RBP16.4■□□□□ 0.22
RANBP3-230ENST00000593025 ALS2Q96Q42 1657 aa16.4■□□□□ 0.22
RANBP3-230ENST00000593025 PIK3C2GO75747 1445 aa16.39■□□□□ 0.21
RANBP3-230ENST00000593025 SPATA31E1Q6ZUB1 1445 aa16.39■□□□□ 0.21
RANBP3-230ENST00000593025 PLEKHG5O94827 1062 aa16.39■□□□□ 0.21
RANBP3-230ENST00000593025 TMEM132EQ6IEE7 984 aa16.39■□□□□ 0.21
RANBP3-230ENST00000593025 RREB1Q92766 1687 aa16.39■□□□□ 0.21
RANBP3-230ENST00000593025 YTHDC2Q9H6S0 1430 aaKnown RBP16.38■□□□□ 0.21
RANBP3-230ENST00000593025 PHF8Q9UPP1 1060 aa16.38■□□□□ 0.21
RANBP3-230ENST00000593025 NUP188Q5SRE5 1749 aa16.37■□□□□ 0.21
RANBP3-230ENST00000593025 ARHGEF10O15013 1369 aa16.37■□□□□ 0.21
RANBP3-230ENST00000593025 ADGRB2O60241 1585 aa16.36■□□□□ 0.21
RANBP3-230ENST00000593025 HAP1P54257 671 aaPredicted RBP16.36■□□□□ 0.21
RANBP3-230ENST00000593025 EZH2Q15910 746 aaKnown RBP16.36■□□□□ 0.21
RANBP3-230ENST00000593025 CAMKK2Q96RR4 588 aa16.35■□□□□ 0.21
RANBP3-230ENST00000593025 BTG4Q9NY30 223 aa16.35■□□□□ 0.21
RANBP3-230ENST00000593025 SPATA31A5Q5VU36 1347 aa16.35■□□□□ 0.21
RANBP3-230ENST00000593025 SPATA31A7Q8IWB4 1347 aa16.35■□□□□ 0.21
RANBP3-230ENST00000593025 A0A0G2JS52 829 aa16.34■□□□□ 0.21
RANBP3-230ENST00000593025 YY1P25490 414 aa16.34■□□□□ 0.21
RANBP3-230ENST00000593025 MYT1Q01538 1121 aa16.34■□□□□ 0.21
RANBP3-230ENST00000593025 PSME1Q06323 249 aa16.33■□□□□ 0.2
RANBP3-230ENST00000593025 ANKRD30BQ9BXX2 1392 aa16.31■□□□□ 0.2
RANBP3-230ENST00000593025 SIRT1Q96EB6 747 aa16.31■□□□□ 0.2
RANBP3-230ENST00000593025 LMOD2Q6P5Q4 547 aa16.3■□□□□ 0.2
RANBP3-230ENST00000593025 CAMTA1Q9Y6Y1 1673 aa16.3■□□□□ 0.2
RANBP3-230ENST00000593025 ANKARQ7Z5J8 1434 aa16.29■□□□□ 0.2
RANBP3-230ENST00000593025 PPARGC1BQ86YN6 1023 aaKnown RBP16.29■□□□□ 0.2
RANBP3-230ENST00000593025 SLC4A1APQ9BWU0 796 aaKnown RBP16.29■□□□□ 0.2
RANBP3-230ENST00000593025 TRIM37O94972 964 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms