RNA–Protein interactions for RNA: ENST00000591798.5

DNMT1-225, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-225ENST00000591798 ORAI2Q96SN7 254 aa13.36□□□□□ -0.27
DNMT1-225ENST00000591798 LOC105371045A0A1W2PR82 267 aa13.34□□□□□ -0.27
DNMT1-225ENST00000591798 GJD4Q96KN9 370 aaPredicted RBP13.34□□□□□ -0.27
DNMT1-225ENST00000591798 NEXMIFQ5QGS0 1516 aa13.34□□□□□ -0.27
DNMT1-225ENST00000591798 ZNF326Q5BKZ1 582 aaKnown RBP13.33□□□□□ -0.28
DNMT1-225ENST00000591798 GLI3P10071 1580 aa13.32□□□□□ -0.28
DNMT1-225ENST00000591798 NUP155O75694 1391 aa13.32□□□□□ -0.28
DNMT1-225ENST00000591798 RALGAPBQ86X10 1494 aa13.31□□□□□ -0.28
DNMT1-225ENST00000591798 PXDNQ92626 1479 aa13.31□□□□□ -0.28
DNMT1-225ENST00000591798 DEFB132Q7Z7B7 95 aa13.31□□□□□ -0.28
DNMT1-225ENST00000591798 ROBO2Q9HCK4 1378 aa13.31□□□□□ -0.28
DNMT1-225ENST00000591798 NPHP3Q7Z494 1330 aa13.3□□□□□ -0.28
DNMT1-225ENST00000591798 ROCK1Q13464 1354 aa13.3□□□□□ -0.28
DNMT1-225ENST00000591798 PRAG1Q86YV5 1406 aa13.3□□□□□ -0.28
DNMT1-225ENST00000591798 KIF1BO60333 1816 aa13.29□□□□□ -0.28
DNMT1-225ENST00000591798 CLTCL1P53675 1640 aa13.29□□□□□ -0.28
DNMT1-225ENST00000591798 SLIT2O94813 1529 aa13.29□□□□□ -0.28
DNMT1-225ENST00000591798 SF3B2Q13435 895 aaKnown RBP13.28□□□□□ -0.28
DNMT1-225ENST00000591798 UNC5CLQ8IV45 518 aa13.28□□□□□ -0.28
DNMT1-225ENST00000591798 HFM1A2PYH4 1435 aa13.27□□□□□ -0.29
DNMT1-225ENST00000591798 CDC42BPGQ6DT37 1551 aa13.27□□□□□ -0.29
DNMT1-225ENST00000591798 USP32Q8NFA0 1604 aa13.25□□□□□ -0.29
DNMT1-225ENST00000591798 ESCO1Q5FWF5 840 aa13.25□□□□□ -0.29
DNMT1-225ENST00000591798 HRCP23327 699 aa13.24□□□□□ -0.29
DNMT1-225ENST00000591798 XPCQ01831 940 aaPredicted RBP13.24□□□□□ -0.29
DNMT1-225ENST00000591798 SEPT12Q8IYM1 358 aa13.24□□□□□ -0.29
DNMT1-225ENST00000591798 NWD2Q9ULI1 1742 aa13.23□□□□□ -0.29
DNMT1-225ENST00000591798 PSDA5PKW4 1024 aaPredicted RBP13.23□□□□□ -0.29
DNMT1-225ENST00000591798 FOXO3O43524 673 aa13.23□□□□□ -0.29
DNMT1-225ENST00000591798 LRPPRCP42704 1394 aaKnown RBP13.22□□□□□ -0.29
DNMT1-225ENST00000591798 PLCH1Q4KWH8 1693 aa13.22□□□□□ -0.29
DNMT1-225ENST00000591798 VGFO15240 615 aaPredicted RBP13.21□□□□□ -0.29
DNMT1-225ENST00000591798 PPLO60437 1756 aa13.2□□□□□ -0.3
DNMT1-225ENST00000591798 ONECUT3O60422 494 aaPredicted RBP13.2□□□□□ -0.3
DNMT1-225ENST00000591798 BAG6P46379 1132 aa13.2□□□□□ -0.3
DNMT1-225ENST00000591798 VPS72Q15906 364 aa13.2□□□□□ -0.3
DNMT1-225ENST00000591798 KRT27Q7Z3Y8 459 aa13.2□□□□□ -0.3
DNMT1-225ENST00000591798 KIF1AQ12756 1690 aa13.2□□□□□ -0.3
DNMT1-225ENST00000591798 SPATA31A3Q5VYP0 1347 aa13.19□□□□□ -0.3
DNMT1-225ENST00000591798 NAIPQ13075 1403 aa13.19□□□□□ -0.3
DNMT1-225ENST00000591798 RGPD1P0DJD0 1748 aa13.19□□□□□ -0.3
DNMT1-225ENST00000591798 ABCA3Q99758 1704 aa13.19□□□□□ -0.3
DNMT1-225ENST00000591798 FMN2Q9NZ56 1722 aa13.18□□□□□ -0.3
DNMT1-225ENST00000591798 CCDC144AA2RUR9 1427 aa13.17□□□□□ -0.3
DNMT1-225ENST00000591798 RPGRIP1LQ68CZ1 1315 aa13.15□□□□□ -0.3
DNMT1-225ENST00000591798 RGPD8O14715 1765 aaPredicted RBP13.15□□□□□ -0.3
DNMT1-225ENST00000591798 NUTM2FA1L443 756 aa13.15□□□□□ -0.3
DNMT1-225ENST00000591798 CCDC9Q9Y3X0 531 aaKnown RBP13.15□□□□□ -0.3
DNMT1-225ENST00000591798 NRAPQ86VF7 1730 aa13.15□□□□□ -0.3
DNMT1-225ENST00000591798 TNS3Q68CZ2 1445 aa13.14□□□□□ -0.31
DNMT1-225ENST00000591798 KNDC1Q76NI1 1749 aa13.14□□□□□ -0.31
DNMT1-225ENST00000591798 TNS1Q9HBL0 1735 aaKnown RBP13.14□□□□□ -0.31
DNMT1-225ENST00000591798 EN1Q05925 392 aaPredicted RBP13.14□□□□□ -0.31
DNMT1-225ENST00000591798 TECPR2O15040 1411 aa13.13□□□□□ -0.31
DNMT1-225ENST00000591798 ITGAEP38570 1179 aa13.13□□□□□ -0.31
DNMT1-225ENST00000591798 HAP1P54257 671 aaPredicted RBP13.13□□□□□ -0.31
DNMT1-225ENST00000591798 R3HDM1Q15032 1099 aaKnown RBP13.13□□□□□ -0.31
DNMT1-225ENST00000591798 DISP2A7MBM2 1401 aa13.13□□□□□ -0.31
DNMT1-225ENST00000591798 YY1P25490 414 aa13.12□□□□□ -0.31
DNMT1-225ENST00000591798 KRT28Q7Z3Y7 464 aa13.12□□□□□ -0.31
DNMT1-225ENST00000591798 WAPLQ7Z5K2 1190 aa13.12□□□□□ -0.31
DNMT1-225ENST00000591798 CABLES1Q8TDN4 633 aa13.12□□□□□ -0.31
DNMT1-225ENST00000591798 IFT172Q9UG01 1749 aa13.12□□□□□ -0.31
DNMT1-225ENST00000591798 A0A0G2JS52 829 aa13.11□□□□□ -0.31
DNMT1-225ENST00000591798 MYT1Q01538 1121 aa13.11□□□□□ -0.31
DNMT1-225ENST00000591798 FAM98CQ17RN3 349 aaKnown RBP13.11□□□□□ -0.31
DNMT1-225ENST00000591798 PLEKHH1Q9ULM0 1364 aa13.09□□□□□ -0.31
DNMT1-225ENST00000591798 FAM83GA6ND36 823 aa13.09□□□□□ -0.31
DNMT1-225ENST00000591798 PSME1Q06323 249 aa13.09□□□□□ -0.31
DNMT1-225ENST00000591798 STK26Q9P289 416 aa13.09□□□□□ -0.31
DNMT1-225ENST00000591798 SBNO1A3KN83 1393 aa13.08□□□□□ -0.31
DNMT1-225ENST00000591798 ARHGEF10O15013 1369 aa13.08□□□□□ -0.31
DNMT1-225ENST00000591798 THSD7AQ9UPZ6 1657 aa13.08□□□□□ -0.32
DNMT1-225ENST00000591798 ABCC11Q96J66 1382 aa13.07□□□□□ -0.32
DNMT1-225ENST00000591798 ADGRB2O60241 1585 aa13.07□□□□□ -0.32
DNMT1-225ENST00000591798 COL14A1Q05707 1796 aaKnown RBP13.07□□□□□ -0.32
DNMT1-225ENST00000591798 PLEKHG5O94827 1062 aa13.07□□□□□ -0.32
DNMT1-225ENST00000591798 EZH2Q15910 746 aaKnown RBP13.07□□□□□ -0.32
DNMT1-225ENST00000591798 FAM182BQ5T319 152 aa13.07□□□□□ -0.32
DNMT1-225ENST00000591798 PHF8Q9UPP1 1060 aa13.07□□□□□ -0.32
DNMT1-225ENST00000591798 NRXN1Q9ULB1 1477 aa13.07□□□□□ -0.32
DNMT1-225ENST00000591798 RRBP1Q9P2E9 1410 aaKnown RBP13.06□□□□□ -0.32
DNMT1-225ENST00000591798 ADGRF5Q8IZF2 1346 aa13.06□□□□□ -0.32
DNMT1-225ENST00000591798 RREB1Q92766 1687 aa13.05□□□□□ -0.32
DNMT1-225ENST00000591798 LMOD2Q6P5Q4 547 aa13.05□□□□□ -0.32
DNMT1-225ENST00000591798 BTG4Q9NY30 223 aa13.05□□□□□ -0.32
DNMT1-225ENST00000591798 TRPM3Q9HCF6 1732 aaPredicted RBP13.05□□□□□ -0.32
DNMT1-225ENST00000591798 CAMKK2Q96RR4 588 aa13.04□□□□□ -0.32
DNMT1-225ENST00000591798 ALS2Q96Q42 1657 aa13.04□□□□□ -0.32
DNMT1-225ENST00000591798 NUP188Q5SRE5 1749 aa13.04□□□□□ -0.32
DNMT1-225ENST00000591798 YTHDC2Q9H6S0 1430 aaKnown RBP13.04□□□□□ -0.32
DNMT1-225ENST00000591798 TMEM132EQ6IEE7 984 aa13.03□□□□□ -0.32
DNMT1-225ENST00000591798 SPATA31A5Q5VU36 1347 aa13.03□□□□□ -0.32
DNMT1-225ENST00000591798 SPATA31A7Q8IWB4 1347 aa13.03□□□□□ -0.32
DNMT1-225ENST00000591798 PARD3Q8TEW0 1356 aa13.02□□□□□ -0.33
DNMT1-225ENST00000591798 CRYBG1Q9Y4K1 1723 aa13.02□□□□□ -0.33
DNMT1-225ENST00000591798 SIRT1Q96EB6 747 aa13.01□□□□□ -0.33
DNMT1-225ENST00000591798 PIK3C2GO75747 1445 aa13.01□□□□□ -0.33
DNMT1-225ENST00000591798 ANKRD30BQ9BXX2 1392 aa13□□□□□ -0.33
DNMT1-225ENST00000591798 TRIM37O94972 964 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms